Difference between revisions of "Os03g0786700"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os03g0786700| Description = N2,N2-dimethylguanosine tRNA methyltransferase family protein| Version = NM_001058026.1 GI:115455780 GeneID:4334353| ...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os03g0786700|
 
GeneName = Os03g0786700|

Revision as of 19:44, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0786700

Description

N2,N2-dimethylguanosine tRNA methyltransferase family protein

Version

NM_001058026.1 GI:115455780 GeneID:4334353

Length

5086 bp

Definition

Oryza sativa Japonica Group Os03g0786700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:33516690..33521775

Sequence Coding Region

33516940..33517053,33517727..33518020,33518525..33518612,33518705..33518826,33519094..33519233
,33519310..33519382,33519661..33519749,33519862..33519967,33520076..33520288
,33520835..33521029,33521160..33521237,33521318..33521632

Expression

GEO Profiles:Os03g0786700

Genome Context

<gbrowseImage1> name=NC_008396:33516690..33521775 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:33516690..33521775 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggatgtggagaacaagctaaaggactatgagattgtgagggaaggcgaggcggagatcatcatcaacaagaaaatagcagcaaatgaagtgttctacaatcccgtgcaggtccacaatagagatatgtcagttgctcttttaaggactttcattgccaagcgtgaggaagaacataaggcaatgatggataagagggacaaggcgcataacaaagtgagccagagtaaatcatctggtccaaatggagagaatgggtcaacaggacagcatgatgaaatggatgttgatgctgaaaaggaaacaaataaagttgcggatgaaacagaagatctgtcaacagaagcaacaaagacaccttcgcggaaagtagccagagagcttaaggcaccagttgttcttgaggctttggctgcttctgggttgagatctatccgttatgctcgtgaaatagacgtgttagaaaaggtggtcgctctggacattgataaagcttgtattgaagcttgcaagcggaatataaagtttaatggtgcttctgctatgagtaagatcgagcctcatttgactgatgctcgagtttatatgctcacacatccaaaagagtttgatgtggttgatattgacccctatggagcaccttctattttccttgattcggctgtacaggctgttgctgatggtgggctattaatgtgcactgccactgatatggcggttctatgtgggccaaatggtgaagtttgccactccaagtatggttcctatccaaccaaagggaagtataaccatgaaatggctttgcgaatcctccttgccagtattgagagtcatgcaaatcgatacaaacgatatattgtgcctgttctctctgtgtctatggatttctacatccgtgtttttgtccgagtatttacttctgcaaacgaagtaaagaagactcctcaaaagctttcttatgtatatcaatgtgttggttgcgattcatttcatcttcagtgtcttggtaggaccataactaagaacaacagtgtgaagaatgcgcctgccattgggcctgttgttcctcaagagtgcagtgcctgtgggaagaaatttactataggagggccaatatggtctgctcctatacatgaccaagagtgggtagtgtctactttgacagaagttaagtcaatgaaggatagatatcctgcatatgataagataacttcagttctgactaccatatcagaggagttacatgacatcccattgttcttcagtctccacaacatatgtgctaatgttaaatgcacatctccatctgcagtattgttccgatctgcagtcctaaatgcgggttatcggatttctagcacacatgtgaatccacttggactaaaaactgatgccccttgggatgttatttgggacatcatgcgctgctgggtgaagaatcatcctgtaaaggaacaaccacatgactctgtagggacagcgatcctttcaaaatcacccaagcttgaagcaaatttctctagagcggctgctgccctcagcagggctcaagcaaagaaggtcaagcggttccttccgaacccagaacgtcattggggtcccaaaatcagagctggtcggaagattacaagtaaacatgcttctctgttaggtccagacgttgtcaaccgtgttatcaacggtgctgccagcaccgaagatgaaaaggtggccgagccaaataatccaacgacagaaaccggaggagatgcaacgaatgaagaggatgaaccttcaacaaagcgccaaaaaaacggcgatgttggattggcaaccgaaccttaa</cdnaseq>

Protein Sequence

<aaseq>MEDVENKLKDYEIVREGEAEIIINKKIAANEVFYNPVQVHNRDM SVALLRTFIAKREEEHKAMMDKRDKAHNKVSQSKSSGPNGENGSTGQHDEMDVDAEKE TNKVADETEDLSTEATKTPSRKVARELKAPVVLEALAASGLRSIRYAREIDVLEKVVA LDIDKACIEACKRNIKFNGASAMSKIEPHLTDARVYMLTHPKEFDVVDIDPYGAPSIF LDSAVQAVADGGLLMCTATDMAVLCGPNGEVCHSKYGSYPTKGKYNHEMALRILLASI ESHANRYKRYIVPVLSVSMDFYIRVFVRVFTSANEVKKTPQKLSYVYQCVGCDSFHLQ CLGRTITKNNSVKNAPAIGPVVPQECSACGKKFTIGGPIWSAPIHDQEWVVSTLTEVK SMKDRYPAYDKITSVLTTISEELHDIPLFFSLHNICANVKCTSPSAVLFRSAVLNAGY RISSTHVNPLGLKTDAPWDVIWDIMRCWVKNHPVKEQPHDSVGTAILSKSPKLEANFS RAAAALSRAQAKKVKRFLPNPERHWGPKIRAGRKITSKHASLLGPDVVNRVINGAAST EDEKVAEPNNPTTETGGDATNEEDEPSTKRQKNGDVGLATEP</aaseq>

Gene Sequence

<dnaseqindica>251..364#1038..1331#1836..1923#2016..2137#2405..2544#2621..2693#2972..3060#3173..3278#3387..3599#4146..4340#4471..4548#4629..4943#gccgtcgcctcggcatagactcccctccccgtctcttcttcgcgagctcgccccgccttctgcgccgagcaccgcctatcttcgccggcgtcctcccgctgcatcagaggtctatctggtggtgagcatccgttctcacgctcctccttcctcatctatctctgcccacgccttatgctttacggtctgcgtctctcgttaggtcgcttgaatcgggaggtttttgttggattggattggattcggagagatggaggatgtggagaacaagctaaaggactatgagattgtgagggaaggcgaggcggagatcatcatcaacaagaaaatagcagcaaatgaagtgttctacaatcccgtgcaggtattgttgtgtatatgttctgtatgcgatttttttgggggttatttgatgctgtatgatggatttgtcggctcctctatcttcttagaatacgtgcatcattagtggttggtttgtttcgaattgatcgaatggtgtgagctgcgagcttcaccaatcgtgcataggtaggactataagtttgggttttggctatttgatttgtatgtgattgggtcgtttcaagtgagtggtctctggtgtagccactagagtactagttgctttgcttttctttacgacttgtttgcattgtgttggtcatttgtgttagcgcatcacgacacgttataatcagtttaaggttgtagacttgcagttgctaggagaatatatgtgaagcttcaaaacagccactcgggcttgtttatgctgcattctcaacaattagtatctctagccataactttttcaagtcactaacagcctgaacttttgctatggaggaattgagtaaagggtggttatgggaatgtgatatcatcggcaaattactatgagtttattcatagttaatatttcctgtatctatcgcttttaaaagttgcagagtaattatatttggcctaaaattatgtctaatctcctatcagctactgtgcttttctgtaattcaattttattgcttgattaggtccacaatagagatatgtcagttgctcttttaaggactttcattgccaagcgtgaggaagaacataaggcaatgatggataagagggacaaggcgcataacaaagtgagccagagtaaatcatctggtccaaatggagagaatgggtcaacaggacagcatgatgaaatggatgttgatgctgaaaaggaaacaaataaagttgcggatgaaacagaagatctgtcaacagaagcaacaaagacaccttcgcggaaagtagccagagagcttaaggcaccagttgttcttgaggtgagacatatagtatgaatagtatagagtaaatctaaaaaaatgcaggtttaatggttgacattccagaaaaacaaggatattatgagttgtggcacataatcccaggtttatggtctacgggtttcatagagccccacccttcgttcaaatctcagttaattttagcaaattaattaagagttaaattaatcatcttaatcaagaattcaatatttaaaaaaatacataaaacactctgacatgaaagtttggacttttagttaaatatgtactctgaatgttatattgttcgaattttaaatagggctgggatattttgcaacctgaggaccataatatttggttctatgtgctgcaagtcataatacgttatgcagttttgacaataaaaaaatcattactgtgttatgtttacatcagttttacggttccatactaatgttgcctgacctgatatgtaatagtttttcagtttttaccggctaacaaaactaaatgcaggctttggctgcttctgggttgagatctatccgttatgctcgtgaaatagacgtgttagaaaaggtggtcgctctggacattgataaaggtaatggcccaattttctgaactggtttcctttctaaataatgatgcttctctgcttgtattcattatactgtgtgggttcttccttttcagcttgtattgaagcttgcaagcggaatataaagtttaatggtgcttctgctatgagtaagatcgagcctcatttgactgatgctcgagtttatatgctcacacatccaaaagagtttgatgtggtaagcctttctcttctggtagttacgaggatatctttatagcattgtttttggtagcaacattttactatataaaaatggtagattttcatgctttacccttttaatcgatttgtttcccctattgacaaactgttgattgtgccaaacagtcaattgtatgttattaagttgaaagaaatgaattttaatcattagaaagtgatgaatactacagttactccatttgtatctttctatgtcaacttacacctgcctcattttcaggttgatattgacccctatggagcaccttctattttccttgattcggctgtacaggctgttgctgatggtgggctattaatgtgcactgccactgatatggcggttctatgtgggccaaatggtgaagtttgccactccaagtatggacattactactggtttgaagcaaaaatctaaatctagttttttgttctaaccatcaagtcggtcttgtaggtatggttcctatccaaccaaagggaagtataaccatgaaatggctttgcgaatcctccttgccagtattgaggtacctatatcactcagttaacttattagtttggatcaatatataactggataattggtttaaaaaactgcataagatgaagtatattcctattaaaggatgtgcaaatttcaatacctatttaagaatctgtttttagaagttttctcgaaaacgcaggagaactgtgttaagtttgaattatttgctttgctaaatgacccataaactctgaagttccattgcttcatccttcatgtatcttgattcttgttatcttttccatttctcaataccagagtcatgcaaatcgatacaaacgatatattgtgcctgttctctctgtgtctatggatttctacatccgtgtttttgtccgagtatttacgtgagttcctttttcccctcatcttttcctttatgcaacaggactatgttcttttgtgcagtacttggttgaaatattctttctaaatttgacacaatgaaatcttatgcagttctgcaaacgaagtaaagaagactcctcaaaagctttcttatgtatatcaatgtgttggttgcgattcatttcatcttcagtgtcttggtaggaccataactaaggtatgcttgcccccccccccccaagcccccaaacacacacaacctcaattctatctgtgctgagtctgaagctttcccttttccttgtgcgtcctctccgaactgaagaacaacagtgtgaagaatgcgcctgccattgggcctgttgttcctcaagagtgcagtgcctgtgggaagaaatttactataggagggccaatatggtctgctcctatacatgaccaagagtgggtagtgtctactttgacagaagttaagtcaatgaaggatagatatcctgcatatgataagataacttcagttctgactaccatatcagaggtattgctatgactgttatctgtgttttatcaagttgtcattgttggtgcatttgtgatgaagttaaaatggcctgttttggtgcatttgctatgaagtgaaactgttgcctattcttaacatcacattaaataattttctttttagaatattgacctaaagcacgatttgcatgcaactgaagagaataaataatggtggctaggaatacgacttttgctaatccattttatcaatacaacctcgatatgtggacctgttaatcatggcatgcaactgatggaaataaataatggcagaaaggaatacgactttttggtaatccatttctcactagaacatagatatgtaaagcacttcaacaggaaaattattgcccaaatgtgcagtaatttagttaaaccatgtacaagtaataaattagttggccatctagttctgcatttgtttgtcatggctcactcatttactcttgagaaattatttatagtttacgaactctttaaaattttctttaaacttcattttgttattattgtgatgcaggagttacatgacatcccattgttcttcagtctccacaacatatgtgctaatgttaaatgcacatctccatctgcagtattgttccgatctgcagtcctaaatgcgggttatcggatttctagcacacatgtgaatccacttggactaaaaactgatgccccttgggatgttatttgggacatcatgcgctgctgggtacattcatttattccttttgccataactttcctaacatattgtgtttgctagtataaattgtgggtagtttactagaaatgctgtttttttttagtattctgactaatattgtgacattcgcatacaggtgaagaatcatcctgtaaaggaacaaccacatgactctgtagggacagcgatcctttcaaaatcacccaagcttgaagtatgcatttcttgaacgtgcagcagtccttttatgcctttcagttagatggcattctaacttcctttgtgttttcataggcaaatttctctagagcggctgctgccctcagcagggctcaagcaaagaaggtcaagcggttccttccgaacccagaacgtcattggggtcccaaaatcagagctggtcggaagattacaagtaaacatgcttctctgttaggtccagacgttgtcaaccgtgttatcaacggtgctgccagcaccgaagatgaaaaggtggccgagccaaataatccaacgacagaaaccggaggagatgcaacgaatgaagaggatgaaccttcaacaaagcgccaaaaaaacggcgatgttggattggcaaccgaaccttaattgtcactgaacctgagcacgtttcgctttcaccactcaattcttccatgtttgtaatgcttcacttttcttgagggtgtgactgatgggtatatctatcagctgtgttgctaaacggtttttagcaatgaattttgatcgcg</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0786700, RefSeq:Os03g0786700