Difference between revisions of "Os03g0788800"

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(Created page with "{{JaponicaGene| GeneName = Os03g0788800| Description = Zinc finger, RING-type domain containing protein| Version = NM_001058041.1 GI:115455810 GeneID:4334369| Length = 381...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os03g0788800|
 
GeneName = Os03g0788800|

Revision as of 19:44, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0788800

Description

Zinc finger, RING-type domain containing protein

Version

NM_001058041.1 GI:115455810 GeneID:4334369

Length

3818 bp

Definition

Oryza sativa Japonica Group Os03g0788800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:33634198..33638015

Sequence Coding Region

33634692..33634992,33635077..33635184,33635274..33635641,33635753..33635852,33635926..33635988
,33637186..33637232,33637331..33637462

Expression

GEO Profiles:Os03g0788800

Genome Context

<gbrowseImage1> name=NC_008396:33634198..33638015 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:33634198..33638015 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatgagaaggtgaagatggagagcaagctgtcctccgcggcggcgttcgtggagggaggtgtgcaggacgcctgcgacgacgcctgcagcatctgcctcgaggccttctgcgacaacgacccctccacggtgacgagttgcaagcatgagtaccatctgcagtgcattcttgaatggtgccagagaagctctcagtgtcccatgtgttggcagcctatcagcatgaaggatcctatgagccaagaactacttgaggctgttgagcaagagaggaacattcgagctaaccgtttgaacactgccgctgtttttcaccatccagtattgggtgattttgaggtccctgtaggagctgatgatgctgaacttgaggagcgcattatacaacacttggctgctgctgctgcaatgcgtaggtcacacagacatggtagaagagatggacatcgtagccgatctggatctcatagccgcccacaaatcgtggtgttttcaaggaatgaggctattcctggtggctccctgcatgcaagttcaggccaagatgaagaccatgaacaatcttctgacttaggttctgctcatccttttgctgctcttgctgctgtagaccaaggacatatgagtggtggttcgcagctatacgtgggtcattctgaccagggtgcttcaaatccatctctgcatgatgagagagcaatgagcaggacatctgaaaatcaatctgcacctgtcaatcaagatacagcaggaccatctgatttgcagtcattctctgacacgctgagatctcgcctacagtcagcttcgatgaagtataaagattctataacaaagagtacgcgtggatggaaggaaagatggttttctcggagtaacactatatcaggtcttggcactgaagtaaggagggaggtcaacgctgggattgctgcggtatctcgcatgatggaacggctagaaacaaaggacgatactggaccatctgctgttcctgcagctagtgcttgctctccttcagacgcaaataatcaaaggacggtatcccccaaccatgctgctgttgtaaatgaaacttcttccacgacttgtgcgtcaggatctggctctcaatga</cdnaseq>

Protein Sequence

<aaseq>MDEKVKMESKLSSAAAFVEGGVQDACDDACSICLEAFCDNDPST VTSCKHEYHLQCILEWCQRSSQCPMCWQPISMKDPMSQELLEAVEQERNIRANRLNTA AVFHHPVLGDFEVPVGADDAELEERIIQHLAAAAAMRRSHRHGRRDGHRSRSGSHSRP QIVVFSRNEAIPGGSLHASSGQDEDHEQSSDLGSAHPFAALAAVDQGHMSGGSQLYVG HSDQGASNPSLHDERAMSRTSENQSAPVNQDTAGPSDLQSFSDTLRSRLQSASMKYKD SITKSTRGWKERWFSRSNTISGLGTEVRREVNAGIAAVSRMMERLETKDDTGPSAVPA ASACSPSDANNQRTVSPNHAAVVNETSSTTCASGSGSQ</aaseq>

Gene Sequence

<dnaseqindica>3024..3324#2832..2939#2375..2742#2164..2263#2028..2090#784..830#554..685#acccgtcattggcgtgaggggaagggagagagcgggaggggggatttttatttaggattttcttttatctgtatttttttttattaagagaaagccttcccgactccgtctcctcctcccctcgtcgtcgtcgtcgtcgtcgtctcgccttcgccgccgaggcggaacaattccgcggggagttcgctgattaatccggccgaatcctgaaattccccttgagcaatcgggataaggtagcctcgcaatccatccgcctttcctttctggatagttttttttggtgtttttcttttgatttatccgtatcgttttggttggattggggacatgggggcggggcgatttcgtggtgtgtttatggtcatttcggtggatttcgtatcgtggatggggggattattgagcaagagactcctgtttcgatcgttgattggcttggtttggcttaatccgtggaattttttgctcatagaattcgttttttctttggtcatcaggcgtaggaatcttgcgcgggaagggctaatcgaatcggttgggctgtacggagatggatgagaaggtgaagatggagagcaagctgtcctccgcggcggcgttcgtggagggaggtgtgcaggacgcctgcgacgacgcctgcagcatctgcctcgaggccttctgcgacaacgacccctccacggtctgcatccgccgaggcgaaaattttggattcgatatgattgtgatcgagtcgctcatttgttttcttggtgtggatgttggcgttttctcttgcaggtgacgagttgcaagcatgagtaccatctgcagtgcattcttgaatggtaatgtttcctttctggcctattggaacgatattgttgtgtggtatttttctttttctgtacttctttgtggagctggtgatgcattgcaatcgatatagatgtaaattacggtaattgaatcatgcatattgcataatttattctaaatttaaggttgctcttgtttccacaaagcaaactatccgatatcaccatgactagtttgcttgtgtacctcagttttatatgatgcaatccctgattgtttgttttgtttctgtatcttcttttccacctagataaagtaaaataaacggccgtgcttttagctgcaaggtgataaaggaagttagtgtttgtctggcaattgtgactacacatcgatggttcaatttaactgtgctgtgggaactacatctaatttgctagggttgcaaaaaatatttgtttttaaggtgatggtgattatctgcttacactatttgaatctatgcttgttgtcgtgctgaaatgctgtcagtaaagtggaactaccacatgatttataagacgaaaatgggatcttacattccagaaacagatcatgtgttaggcatcgcaatgctcttcaaccatgatcgacttgtatatgaaggttaatgatgatcacctgcactttaagcagtgaataaccatacagaaattctccagcatatgagactcaataagccattaaggagcatatgatccacagactttcattatttcagcaataccagcctccatcaggtggggcaggggttgtaaggcttctgagctgcccagctggaagatttccttcatctgtgcaagcagtctagaacgatagctttgtcgtagtagttgtgagcgtgcagttcttctgcagtatgctcataaaactatcgttgcccttctggtgtctattatggactgatggggacatattctaaatatttattctatacgagcttgcagatactagagatgtacaaaaaaataatttatgtgcgatcaatctgaaatggaggatataatatattctcatgctttctttttatgaatacgaacgattttgagggtgagctcatgtgatcaaggataatgctgtatataaagtcaatatccaatcgatatgtagtgaaaatttgtcaaaatactgtactgtcctcgacaatattaatttttgatgtgtgcttctcactgtttgatatctaggtgccagagaagctctcagtgtcccatgtgttggcagcctatcagcatgaaggatcctatgaggtagaacttgcatcctgtgtatctccctagtgaaccaatttagtggttctcattttatatttgaactgtgcagccaagaactacttgaggctgttgagcaagagaggaacattcgagctaaccgtttgaacactgccgctgtttttcaccatccagtattgggtgattttgaggtgcagcacgttttattgctatcatttggatatttgcgatgattcctctttgcaccctggaggtaggcttaattcatacaactatattgatgtaccgttttctgatttcaggtccctgtaggagctgatgatgctgaacttgaggagcgcattatacaacacttggctgctgctgctgcaatgcgtaggtcacacagacatggtagaagagatggacatcgtagccgatctggatctcatagccgcccacaaatcgtggtgttttcaaggaatgaggctattcctggtggctccctgcatgcaagttcaggccaagatgaagaccatgaacaatcttctgacttaggttctgctcatccttttgctgctcttgctgctgtagaccaaggacatatgagtggtggttcgcagctatacgtgggtcattctgaccagggtgcttcaaatccatctctgcatgatgagagagcaatgagcaggtatttcctacaacttacggtatatatttgcatgctattcctatccaaattcaagaggtttactctctttgtatcttgatgttaatcaggacatctgaaaatcaatctgcacctgtcaatcaagatacagcaggaccatctgatttgcagtcattctctgacacgctgagatctcgcctacagtcagcttcgatgaagtaatatctcaaactcctgaaaatgccttacacattgaacgtatgcatcagtgtcttacttgtgggcattctttacaatgccaggtataaagattctataacaaagagtacgcgtggatggaaggaaagatggttttctcggagtaacactatatcaggtcttggcactgaagtaaggagggaggtcaacgctgggattgctgcggtatctcgcatgatggaacggctagaaacaaaggacgatactggaccatctgctgttcctgcagctagtgcttgctctccttcagacgcaaataatcaaaggacggtatcccccaaccatgctgctgttgtaaatgaaacttcttccacgacttgtgcgtcaggatctggctctcaatgagcccactccatgttcgttgaagaattggatacactgtgaagacaggtatatatgctcttcttgtgcacgagaaagctttaaaatttttaaggttttggggtggcaaaatgtcacaagaaacattttcctttagtagtttctgaaaccgctgtcaaattcacttggatcaggtccagagagaaacgccgtttgttcggagccacctgagatccagcgatgcttcatgatctttggtaggtctgtgtgcttcaggaagttcgctgaagcatttgcatccagatcgcgggacataagacttgtgcttgcggatgaacctttacatttttttaccttgtgtaatatatatgcaaggttgttatgaaatcataatcgctgtaaattgcaacataaagaatgtcggttgtgaaattcttgttgatatccctataaatgtagtgcaccaagggcgtcatgagtcatcagttcgtcgcttgacttgtgagtactcaatcttc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0788800, RefSeq:Os03g0788800