Difference between revisions of "Os03g0794800"
(Created page with "{{JaponicaGene|
GeneName = Os03g0794800|
Description = Similar to XRN3|
Version = NM_001058077.1 GI:115455882 GeneID:4334408|
Length = 10912 bp|
Definition = Oryza sativa...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os03g0794800| | GeneName = Os03g0794800| | ||
Revision as of 19:44, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os03g0794800 |
|---|---|
| Description |
Similar to XRN3 |
| Version |
NM_001058077.1 GI:115455882 GeneID:4334408 |
| Length |
10912 bp |
| Definition |
Oryza sativa Japonica Group Os03g0794800, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 3:33900118..33911029 |
| Sequence Coding Region |
33900280..33900486,33900575..33900677,33900790..33900866,33900955..33901146,33901253..33901372 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008396:33900118..33911029 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008396:33900118..33911029 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgggagtcccggcgttctaccggtggctggcggaccggtacccgcagacggtgtcggacgcggtggaggaggagcccgtggagctcgagcccggcgccttcgtccccgtcgacctccgccgccccaaccccaacggcctcgagttcgacaacctctacctcgacatgaacggcatcatccacccctgcttccaccccgagggccgcccggctccgaccacctacgacgaggtgttcaagtcgatttttgcctacattgaccacctcttcggcctcgtccgcccgaggaagctcatctacatggccatcgatggcgtcgcgccaagggcgaagatgaatcagcagaggtctagacgtttccgggctgctaaggatgcggctgacgcggcagctgaggaggaaaggttgaggaaggaatttgaggctgaaggcaggactttggttgcgaaggagaagtcggaagcgattgactcaaatgtcataactcctgggacaccattcatgtttgtactctcttcggcgcttcaatactacatacagctgagattgaaccacacacctgggtggcaatctgtcaaggtaatgctttctgattcgaacgtccctggggagggagaacacaagattatgtcatacatccgcctgcagcgcaatctcccaggatttgacccaaatacacgccattgtttatatggccttgatgctgatttgatcatgctttctctggctactcatgaggtccacttctccattttaagagaggtgattaccatgccagggcaacatgaaaaatgctttctctgtggtcaagttggtcacttggctgctgaatgcagaggatctggtcaggctgataagaccgtggagctccctcctatccataagaagaagtatcagtttcttaacatctgggttctgcgtgaatacctggagaaggatttggaaattgttgatccccccttcaagataaactttgagcgtgttgtggatgattttgttttcatgtgtttctttgttgggaatgactttctgcctcacatgccaactttggagatccgcgagggtgccattaatcttctcatgaatatatatagaagggagttcacatcaatgggtggttacctcaccgatgggggtgaggttttgttggatcgagtggagcatttcattcaatctgttgctgtccatgaagagcaaattttccagaagcgtgcacgcattcagaaggctatccagaacaatgaggagaggaatagagtgcagacagagaactctgaggataatcaatatgtggacaaggtaaaattaggagaaccaggatacagggtgagatactacgctgagaagtttaaagaagaggcagaactaaaacccattgatcaagttcagagagatgttgtccagaaatatgtggaaggtctttgctgggttatgagatactactatcaaggtgtttgctcatggcagtggttttatccataccattatgcaccttttgcatcagacctgaaatgcttggctgaattggagattacatttttcttgggtcaacctttcaagccatttgatcaactaatgggaacactaccagctgctagttccaatgcgttgccaaagtactatggggatttgatgaatgatcctaattcaccgttgaagtctttctatcccaaagattttgagatagacatgaacggcaaacgttttgcatggcagggtattgcaaaattgccttttatcgatgaaaggcgtctgcttgcggagacgcagaagcttgaagaaacattgacagatgaagagagattcaggaataggacaatgtttgacatcctttacgtgcgggaaactcatccattggccgctcaaattgcatttctatatcagatgtgctctcaatcaccaaatgcttcctatataattcccattgaccctgctgctagtggtggaatgaacggatttctttgtttatctgaaaggaactgttacagcatcgtggtaacatctccagttaaggggttcaatggcatcgcccagaacagagttctgaatgcaacctaccttaaccctcagtatcacaaacacattcctgagcctccggaaggtgtcatcatacctgcaaagatattgaagcctagtgatttcaaaccctttcctattttgtggcatgaagataatagtcggcgtcagccaagagaaaggcctcaggtttctggagctctgtcaggctctgtcttaggagaggctgcacatcgcctggtgaaaaactcactgcagataaaatccggctactctgctgggctgcttgacatgccatacaggggtgccccctatggtcctggaaacagacctaggcctgctggaccattgggatatgagagaggttttgttgaaaattcatacaatggacacatgtccagaagcgttccaaattctcatcctcagttcttcggcgacgctcaagccaacagacagaatgtgaggatactggaacgaccaaactatcgaaacaacgacagtgccatccattcagggatgtcgcaactaacaatccaagatggcccaaggatgcatcaaaacaacaggatgcagaactccggattttcacctaatcagccacatcccaatcagtatgcaggattcccaccccagcgtcccatgcagaactccggttttacgccacagcgacctgcacaatattcaggatttccacaccagaggcctgtccaaataggacttcaacatcagccagcagtaaatgggattcaaccaccgttaccccccagtgcatggattggcaggccaataagtggagtcccagcaggagtacctgccaagcaggatcctaggatggccatggataggcagcccaaacaagataactcgagatcacagcatgacaagagacagcaggctactaaggtagtataccgtgtcaaaggtcaaggtcccaatggcctgagtgagtga</cdnaseq> |
| Protein Sequence |
<aaseq>MGVPAFYRWLADRYPQTVSDAVEEEPVELEPGAFVPVDLRRPNP NGLEFDNLYLDMNGIIHPCFHPEGRPAPTTYDEVFKSIFAYIDHLFGLVRPRKLIYMA IDGVAPRAKMNQQRSRRFRAAKDAADAAAEEERLRKEFEAEGRTLVAKEKSEAIDSNV ITPGTPFMFVLSSALQYYIQLRLNHTPGWQSVKVMLSDSNVPGEGEHKIMSYIRLQRN LPGFDPNTRHCLYGLDADLIMLSLATHEVHFSILREVITMPGQHEKCFLCGQVGHLAA ECRGSGQADKTVELPPIHKKKYQFLNIWVLREYLEKDLEIVDPPFKINFERVVDDFVF MCFFVGNDFLPHMPTLEIREGAINLLMNIYRREFTSMGGYLTDGGEVLLDRVEHFIQS VAVHEEQIFQKRARIQKAIQNNEERNRVQTENSEDNQYVDKVKLGEPGYRVRYYAEKF KEEAELKPIDQVQRDVVQKYVEGLCWVMRYYYQGVCSWQWFYPYHYAPFASDLKCLAE LEITFFLGQPFKPFDQLMGTLPAASSNALPKYYGDLMNDPNSPLKSFYPKDFEIDMNG KRFAWQGIAKLPFIDERRLLAETQKLEETLTDEERFRNRTMFDILYVRETHPLAAQIA FLYQMCSQSPNASYIIPIDPAASGGMNGFLCLSERNCYSIVVTSPVKGFNGIAQNRVL NATYLNPQYHKHIPEPPEGVIIPAKILKPSDFKPFPILWHEDNSRRQPRERPQVSGAL SGSVLGEAAHRLVKNSLQIKSGYSAGLLDMPYRGAPYGPGNRPRPAGPLGYERGFVEN SYNGHMSRSVPNSHPQFFGDAQANRQNVRILERPNYRNNDSAIHSGMSQLTIQDGPRM HQNNRMQNSGFSPNQPHPNQYAGFPPQRPMQNSGFTPQRPAQYSGFPHQRPVQIGLQH QPAVNGIQPPLPPSAWIGRPISGVPAGVPAKQDPRMAMDRQPKQDNSRSQHDKRQQAT KVVYRVKGQGPNGLSE</aaseq> |
| Gene Sequence |
<dnaseqindica>163..369#458..560#673..749#838..1029#1136..1255#1342..1404#1529..1663#1819..1983#2096..2173#4295..4381#4540..4611#6284..6382#7135..7205#7702..7830#7928..8004#8178..8218#8311..8385#8517..8665#8758..8862#8940..9015#9457..9533#9753..10521#cctcgtctctcctcccccctccagatcgaaccgagactccgagagagattaggcagccgccgcacgccaccaccgccgtcgcgcgaggagctaccggaagcgccgccccggaggaggaggaggaggagagagcggaggagggagagagggggatccggcgagatgggagtcccggcgttctaccggtggctggcggaccggtacccgcagacggtgtcggacgcggtggaggaggagcccgtggagctcgagcccggcgccttcgtccccgtcgacctccgccgccccaaccccaacggcctcgagttcgacaacctctacctcgacatgaacggcatcatccacccctgcttccaccccgagggccgcgtacgatccgattccccccatccccttctctgtctcctcctcctcttctaatcgatctcaccatggatttggccggcctctcctgcagccggctccgaccacctacgacgaggtgttcaagtcgatttttgcctacattgaccacctcttcggcctcgtccgcccgaggaagctcatctacatggccatcggtgagttgcttctatatctgtatgtgtatgcttgctgctgctgctgctgctactgcgtcgtgatgctaagttgtggggtgtatgtgtgtggatgctctgtctgcttgcgcagatggcgtcgcgccaagggcgaagatgaatcagcagaggtctagacgtttccgggctgctaaggatgcggctgacgcggtaaggttattgcttttgtggttgcggtgccacctgccgccgacattgagggtaaaggcggttgttcaccggttgtcgctttgttcaggcagctgaggaggaaaggttgaggaaggaatttgaggctgaaggcaggactttggttgcgaaggagaagtcggaagcgattgactcaaatgtcataactcctgggacaccattcatgtttgtactctcttcggcgcttcaatactacatacagctgagattgaaccacacacctgggtggcaatctgtcaaggtgttgaatgtttatattacttgtttggatagcattgtaaaattagtccatttctggatgtgttctatcatactaaatgtgaactgtgttgggcatatttttcaaggtaatgctttctgattcgaacgtccctggggagggagaacacaagattatgtcatacatccgcctgcagcgcaatctcccaggatttgacccaaatacacgccattgtttatatggccttgtaagttcactagaaagttacaaagtagctgttggcttgttgtttgcattccctctgctttaaacaccggctgccacattctccaggatgctgatttgatcatgctttctctggctactcatgaggtccacttctccattttaagagaggtaaatcttctgatgattctttgctgaagacttttttgaccagttttaaatagttattttctctgtcctttatgttttaccttaggagtacttccataactacataattcaactgactttacaggtgattaccatgccagggcaacatgaaaaatgctttctctgtggtcaagttggtcacttggctgctgaatgcagaggatctggtcaggctgataagaccgtggagctccctcctatccataagaagaagtatcaggtattcggactacaccaccttttgttttagtgtattttcgtatttctattcattgccaacttattttgaggggccacatctgaaataattcgtaagctgtggtcctcatcttttactgatgtcgatatactgtgtaactatttacctgtttacagtttcttaacatctgggttctgcgtgaatacctggagaaggatttggaaattgttgatccccccttcaagataaactttgagcgtgttgtggatgattttgttttcatgtgtttctttgttgggaatgactttctgcctcacatgccaactttggagatccgcgaggtctgttgatttcgcagacttctctctaatattttaatagggattctttatttatcaatcgtgtaaccgatgcttatacgccaagtgattaattttctgttttgttctgtagggtgccattaatcttctcatgaatatatatagaagggagttcacatcaatgggtggttacctcaccgatgggggtgaggtaaagttcctttgctcacattcttgtgtggttcaaactttgaatccctaataatgcattgccttttgttttgacatgtgcttatagaatgtagaatagatcagtgctcagtgatcaatgtaacttggattatcttaactgtaactttatgatgaactaacacttgatcaattactgtgatgtttccatattatatcactaattttagggcaggctattgagaaaattatctgtggatctacatgattatgctgtcatgtagtaccattactctgtaggttattaggctacagtgttaccgatcccatcaactcctaactattgaagaattgatgcctggaatatatatgttgtactttggtgggctagaaagttcatagactctgaataattaagatgtcagcactttagctagatcgattatcgaacagcaaagtgaagcttatttcctcatctatagtttgttgaagcattaaaatataattttgtggactcttctgtctgcacgagttcaattctcatatcacatttaatggcattaattttacagtccagcgacaaagagatgctagctaaatggctcatatgtttgttctctcagtattgattggcctagcttctctgaattctattagttaggacttaggatcagctatttagtgtggagattgtatcattaatagcagcaagtcagtaagcaagaaataataaggtcaccccctaggtattcccctcttctcatgtgtagttcctttgttcccctgcacatcatgttagtataatcctttgtgtttatccattacttagctagtaagaaaatatacagctggcaggagtagtaaatttggaattttcactttagctgtaaacaacaggatgaacattatgccagatatgtacccttctaaagctactgtagcactgtcggatgtgttacagggtgtatatccattactgtagcaccgacttaaaagtcctatagaaggacatgtacccttccaaagttagtaagcttttcagcaacacaatcataatttcagcttgactgtagttcagaagtgatcctaccaacacatcatattttcccttctcatgtgtacttataattattgaacgataaggctgcttatttcctttcagcaccacttttataggaccacatacaccacattcacagaatttcttactgaagggacggcttttcataattgaaatatggttgtgttatcattatttatgcagaagtaatttctatatggaccccatgggcatattgttttgagccattgcttgtgaaaacaaatttatttaggatatagacaaatatatgctattttagcaaaaaaaaagtagtgtttggctttaccttgtttgacgaatatgttgtgctatagttcattagcacactatgggccatttttggtatagttttccttgtttggcttggcttctccctttgctaccttccaactggagcatattggctttacctggagatattcatgtttttcacttcaagcactgaaatcttgttttggtgagtttgtggtgtgacctaacaatatgagtttgtggtgtgacctaacaatatgccctatctagtttttatcatctattggtatggtagaattatcactctgttcatgtagtgaatggtatagtccaagtgatagaaccatcctagtttagtccaagggataaagtatgaacatcttttagagttgtgggaccagttgtgaacggtatagttgagggacaaaaactagaccaacgccattgttgaaggaccaaatgtggacttccttgaccaaattaatgtagcttgaacatgcagttcttgctgcaataatggcatattctggacatcatgcagttcaaaggagcacacatttttaagtcaattcgctatttcattgcaggtgtaattttaaatggaagaattctctaagttttcatctgttctgatttaattatcttggcttcgtaaggagccagggttgtgttacaatgaacttataagcttataaagcaacaaatgcccttttaccgcagaatgcatggactatattttgcatgaggacaattgcctgacatcatgacattttatctttttcaataaaggttttgttggatcgagtggagcatttcattcaatctgttgctgtccatgaagagcaaattttccagaagcgtgcacgcattcagaaggtactttgcacctaaatcctccaaccagtgctgccttggttctttaatcctataaatttgtcatgtatgcaaatgcacagagatctatctatctccaactaagtctgtcttttggtagtgctacatcagggtacacgcttatgattgctatattgcaggctatccagaacaatgaggagaggaatagagtgcagacagagaactctgaggataatcaatatgtggacaaggtttacttttctcctcttatagaatcatgttgacaatatatgataattagatgtcatatttaagttgtgttagagcagccagtatttcttagaggaatcctagtttgcactgattttttcagcatcacctattaatact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