Difference between revisions of "Os03g0828800"

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(Created page with "{{JaponicaGene| GeneName = Os03g0828800| Description = Curculin-like (mannose-binding) lectin domain containing protein| Version = NM_001058313.1 GI:115456354 GeneID:433465...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os03g0828800|
 
GeneName = Os03g0828800|

Revision as of 19:46, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0828800

Description

Curculin-like (mannose-binding) lectin domain containing protein

Version

NM_001058313.1 GI:115456354 GeneID:4334654

Length

3164 bp

Definition

Oryza sativa Japonica Group Os03g0828800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:35660810..35663973

Sequence Coding Region

35660929..35663322

Expression

GEO Profiles:Os03g0828800

Genome Context

<gbrowseImage1> name=NC_008396:35660810..35663973 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:35660810..35663973 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgttcccacatattctcttcctatccctgctgctcttggttcctgaagaccccaattttgccgctggagcttcagccaatgagtcattcattactttgggatcctctatcaacacaagcagcacccagtactggtcctcctcttcaggccgctttgcgttcggcttctatcccaacggcgaaggcttttctattggggtgtggcttgtgattggtgtgtcaaggacaattgtgtggactgccaaccgtgatgagcccccaattgctggtggttctatcatatttgggcatggtggtgcgctccaatggtcacgaactccatcaactccaggtagccaactgaaccccatatctgacagttctacacctgctgcctctgctgccatgttgaacaccggcaactttgtactgtatgatatgaacagacaggtcatatggtctactttcagttttccgacagacacattgttggcaggtcagaacttgcgtccaggcagatttcttctttcaggtgtctctcagagtaatcatgccagtggcaagtataggcttgagaaccaacaagatggcaatcttgtgatgtacccaacaggcaccattgactctggtagtgcgtactggtctacctggactttcaacatgggcctcctcctcacgctttccttagatcctaatggtaccatatggatgttcgacaggaaaaactcctatacaaagatactgttccatgccaaccagccttccaatgcctcccctgatatggaaatttactatcgtctgacatttgatcccgacggcatcctacgactctactcacatgttttctttaagcttggcagggcacctacaacagaggttgagtggcttgagcctggcagtgatcgctgccttgtgaaaggtgtttgtggtccgaatagcttctgccatctcaccgtgactggagagacaagctgctcttgccttcctggttttgaattcttgagcactaaccagagcacacttggttgttggagagcattgccaaccggtggctgcgtgaggaacagctctaacgatgagacgagagtgacaaccacgatggtcgaagtgaagaacactacttggttagagaacccgtatgctgttctaccagccacaactagtattgaagcctgcaaactactttgcctctccgattgtgcttgcgatatcgccatgtttagtgattcctactgctcaaaacagatgcttcccattagatatggcaggatgcctggtaacaccacactctttgtgaagatctacacttaccagaccatatccggtactcgccaaagggctatgagtatccatgcaaattctgcattgatatcaggggtttccttggccatcttttctctgtttgtgctattagtggcatctctattacttatctgcaggcatcggcgatcattggcgcacatgacgatgacggcaccacggcaagaggactccaggattgatgggaacattgttggcctcagatcctattctttccaggaactagatttggcaacaaatggtttcggcgaagagcttggcaagggggcatacgggacagtattcaaaggtgtcgtggccgacaccaaccaggacatcgctgtgaagaggctcgaaaagatggctgaggatgggcagcgtgaatttaacagggaagtgcgtgtgattgcaagaacacaccaccggaacctgctgcgattgcttggtttctgcaatgagggcattcatcacctgcttgtgtatgagtacatgccaaatggatccctggcaaacctcctctttcactcagatgcctcccctgcctggagcaagagggttgcaattgcactagatgttgccagagggttgcaatacctgcattcagagatagagggcccaataatccactgcgatatcaagccagagaacatactcattgacagtttggggatagctaagattgctgactttgggctagcaaagctactgattgggaaccaaacaaagacattcaccggcatccgaggaacccggggctatctagcaccggagtggagcaagaacagagcaatcaccgtgaaggcagacgtgtacagctacgggatcatgcttctggaggtcataagctgtaagaaaagcatggatctgaagcgggctggggaggagtacaacatttccgagtgggcatatgagtgtgtgatgtttggtgatgctggcaaggtggcagatggtgtcgacgaagctgagctggtgagaatggtgaacgtcggcatttggtgcacacagagtgaacctgtgatgcgaccagcgatgaagagtgttgctcttatgattgaaggtgccatcgaagttcaccagcccccaccccctgcatcatattcgcagtcactaacatga</cdnaseq>

Protein Sequence

<aaseq>MFPHILFLSLLLLVPEDPNFAAGASANESFITLGSSINTSSTQY WSSSSGRFAFGFYPNGEGFSIGVWLVIGVSRTIVWTANRDEPPIAGGSIIFGHGGALQ WSRTPSTPGSQLNPISDSSTPAASAAMLNTGNFVLYDMNRQVIWSTFSFPTDTLLAGQ NLRPGRFLLSGVSQSNHASGKYRLENQQDGNLVMYPTGTIDSGSAYWSTWTFNMGLLL TLSLDPNGTIWMFDRKNSYTKILFHANQPSNASPDMEIYYRLTFDPDGILRLYSHVFF KLGRAPTTEVEWLEPGSDRCLVKGVCGPNSFCHLTVTGETSCSCLPGFEFLSTNQSTL GCWRALPTGGCVRNSSNDETRVTTTMVEVKNTTWLENPYAVLPATTSIEACKLLCLSD CACDIAMFSDSYCSKQMLPIRYGRMPGNTTLFVKIYTYQTISGTRQRAMSIHANSALI SGVSLAIFSLFVLLVASLLLICRHRRSLAHMTMTAPRQEDSRIDGNIVGLRSYSFQEL DLATNGFGEELGKGAYGTVFKGVVADTNQDIAVKRLEKMAEDGQREFNREVRVIARTH HRNLLRLLGFCNEGIHHLLVYEYMPNGSLANLLFHSDASPAWSKRVAIALDVARGLQY LHSEIEGPIIHCDIKPENILIDSLGIAKIADFGLAKLLIGNQTKTFTGIRGTRGYLAP EWSKNRAITVKADVYSYGIMLLEVISCKKSMDLKRAGEEYNISEWAYECVMFGDAGKV ADGVDEAELVRMVNVGIWCTQSEPVMRPAMKSVALMIEGAIEVHQPPPPASYSQSLT</aaseq>

Gene Sequence

<dnaseqindica>120..2513#gtttacacttcacagggtctaacaaaagccattccctgcttagaattgccagtaggtttcttcagcatacaattactatctcatctcaaggaactgcagtagactcttccacctggacaatgttcccacatattctcttcctatccctgctgctcttggttcctgaagaccccaattttgccgctggagcttcagccaatgagtcattcattactttgggatcctctatcaacacaagcagcacccagtactggtcctcctcttcaggccgctttgcgttcggcttctatcccaacggcgaaggcttttctattggggtgtggcttgtgattggtgtgtcaaggacaattgtgtggactgccaaccgtgatgagcccccaattgctggtggttctatcatatttgggcatggtggtgcgctccaatggtcacgaactccatcaactccaggtagccaactgaaccccatatctgacagttctacacctgctgcctctgctgccatgttgaacaccggcaactttgtactgtatgatatgaacagacaggtcatatggtctactttcagttttccgacagacacattgttggcaggtcagaacttgcgtccaggcagatttcttctttcaggtgtctctcagagtaatcatgccagtggcaagtataggcttgagaaccaacaagatggcaatcttgtgatgtacccaacaggcaccattgactctggtagtgcgtactggtctacctggactttcaacatgggcctcctcctcacgctttccttagatcctaatggtaccatatggatgttcgacaggaaaaactcctatacaaagatactgttccatgccaaccagccttccaatgcctcccctgatatggaaatttactatcgtctgacatttgatcccgacggcatcctacgactctactcacatgttttctttaagcttggcagggcacctacaacagaggttgagtggcttgagcctggcagtgatcgctgccttgtgaaaggtgtttgtggtccgaatagcttctgccatctcaccgtgactggagagacaagctgctcttgccttcctggttttgaattcttgagcactaaccagagcacacttggttgttggagagcattgccaaccggtggctgcgtgaggaacagctctaacgatgagacgagagtgacaaccacgatggtcgaagtgaagaacactacttggttagagaacccgtatgctgttctaccagccacaactagtattgaagcctgcaaactactttgcctctccgattgtgcttgcgatatcgccatgtttagtgattcctactgctcaaaacagatgcttcccattagatatggcaggatgcctggtaacaccacactctttgtgaagatctacacttaccagaccatatccggtactcgccaaagggctatgagtatccatgcaaattctgcattgatatcaggggtttccttggccatcttttctctgtttgtgctattagtggcatctctattacttatctgcaggcatcggcgatcattggcgcacatgacgatgacggcaccacggcaagaggactccaggattgatgggaacattgttggcctcagatcctattctttccaggaactagatttggcaacaaatggtttcggcgaagagcttggcaagggggcatacgggacagtattcaaaggtgtcgtggccgacaccaaccaggacatcgctgtgaagaggctcgaaaagatggctgaggatgggcagcgtgaatttaacagggaagtgcgtgtgattgcaagaacacaccaccggaacctgctgcgattgcttggtttctgcaatgagggcattcatcacctgcttgtgtatgagtacatgccaaatggatccctggcaaacctcctctttcactcagatgcctcccctgcctggagcaagagggttgcaattgcactagatgttgccagagggttgcaatacctgcattcagagatagagggcccaataatccactgcgatatcaagccagagaacatactcattgacagtttggggatagctaagattgctgactttgggctagcaaagctactgattgggaaccaaacaaagacattcaccggcatccgaggaacccggggctatctagcaccggagtggagcaagaacagagcaatcaccgtgaaggcagacgtgtacagctacgggatcatgcttctggaggtcataagctgtaagaaaagcatggatctgaagcgggctggggaggagtacaacatttccgagtgggcatatgagtgtgtgatgtttggtgatgctggcaaggtggcagatggtgtcgacgaagctgagctggtgagaatggtgaacgtcggcatttggtgcacacagagtgaacctgtgatgcgaccagcgatgaagagtgttgctcttatgattgaaggtgccatcgaagttcaccagcccccaccccctgcatcatattcgcagtcactaacatgagctgcaagcataattctgagtaagtaaaaggcaaaaaaaaaagaggtctacctgtaacatttttttttaaaaaaaaaactgttgataagcagagtgcaatctgaatctactgaatagatccagagtatatgagaagtggcacttagcaaaaggtgtgatcagaagaaacctcattgattgtgtaaagggaaaaaaacatttgatagcagatacccattacagaacaactctttgtcaacaggcacaaaagaacctagctaattttttgtaattttaacaattataatatttcagactttttttagttgaaatgtcaggtcgtttgctgatagaaatccttgtttaatttgcagaaaaatgatgaagtttgcttgaagcgctgcaaagtacagcaagggtcgtccgtctatcaccagttcaaatacatgagcttgcatcatggaacaccctgaaaattgacaaccaagtcttttacattatgcagctataagttttacattttgatcggtagaatgctatggatggcataagtacaggaacggtcctagcagatgctgttatgctagaagtctaatagatcatttcagtgcaggaaaatatatgatgaatcatgtactctgtttctgatatggaataaagtttatgagttct</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0828800, RefSeq:Os03g0828800