Difference between revisions of "Os03g0833800"
(Created page with "{{JaponicaGene|
GeneName = Os03g0833800|
Description = Virulence factor, pectin lyase fold family protein|
Version = NM_001058347.1 GI:115456422 GeneID:4334689|
Length = 4...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os03g0833800| | GeneName = Os03g0833800| | ||
Revision as of 19:46, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os03g0833800 |
|---|---|
| Description |
Virulence factor, pectin lyase fold family protein |
| Version |
NM_001058347.1 GI:115456422 GeneID:4334689 |
| Length |
4274 bp |
| Definition |
Oryza sativa Japonica Group Os03g0833800, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 3:35888087..35892360 |
| Sequence Coding Region |
35888720..35888737,35889592..35889909,35890182..35890302,35890394..35890568,35890665..35890735 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008396:35888087..35892360 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008396:35888087..35892360 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgaggagatctgcatctctactccgagtccttttggttttcataaccatggttgggactcaatggtccaatgtatccagtacatactgcaaggacatggcatcaagcgtatatcgaccccacagtgtcacaataactgaatttggtgctgttggggatggtgtgactctcaataccaaagcattccagaacgcaatcttctacctcaattcatttgcagacaagggtggcgcacagctcttcgtgcctgcgggaaggtggctgacagggagttttagtcttatcagccatctcactttgtcactggataaggatgcagaaataattggatctccggattcatccgattggccagtcattgatcctcttccatcctatgggcgaggtagagagctccctggaaaaagacatcagagtctaatttttggaactaatctaacagatgtaataattactggcgctaatggtaccattgatggccagggagccatttggtgggattggttccacagcaacacactgaattatactaggccacatcttgttgagttgatgtactccaccgatgttgttatatccaatttaaccttcaagaactcaccgttttggaatatccatcctgtatactgcagccaagtgcttgtccagcatgtcacaatcctagcgcccctgaattcaccgaacactgatggcattgatccagattcgtccacaaatgtctgcattgatcattgttatgtcagaaatggagatgatgttattgtcataaaaagtgggtgggatgagtatggcatttcctttgctcgtcctagcacaaacatcagtatcagcaacatcacaggagagacaaggggtggtgcagggattgcctttggaagtgagatgtcaggtggcatatccgaagtccgggctgagggtctccgcatcgtcaactcaatgcacgggatcagaatcaagaccgctccagggcgtggagggtatgtgaagaacgtgtacatatctgatgtgagcatggacaatgtttcgatggccatcaggatcaccggaaactttggtgaacatcctgatgacaaatatgatagaaatgctctcccaatgataagcaatattacaatcgaaaatgtggtcggcgtcaatgttggtgtcgctggcatcttggaaggaattgagggggacaacttcagcagcatttgcctgtccaatgtttccctcagtgtacagtctatgcatccctggaattgttcgcttatcgaaggttattcaaactctgtgatcccagagtcatgtgagcaactcagaacagattgtggacagacaccaatttgctatgatggtggaagttcttcagcaatacatgcacaggcagccagacatagattgtcgagtgccagcagattgctaaatcctttactgaagttggcgatgctgtag</cdnaseq> |
| Protein Sequence |
<aaseq>MRRSASLLRVLLVFITMVGTQWSNVSSTYCKDMASSVYRPHSVT ITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAQLFVPAGRWLTGSFSLISHLTLSL DKDAEIIGSPDSSDWPVIDPLPSYGRGRELPGKRHQSLIFGTNLTDVIITGANGTIDG QGAIWWDWFHSNTLNYTRPHLVELMYSTDVVISNLTFKNSPFWNIHPVYCSQVLVQHV TILAPLNSPNTDGIDPDSSTNVCIDHCYVRNGDDVIVIKSGWDEYGISFARPSTNISI SNITGETRGGAGIAFGSEMSGGISEVRAEGLRIVNSMHGIRIKTAPGRGGYVKNVYIS DVSMDNVSMAIRITGNFGEHPDDKYDRNALPMISNITIENVVGVNVGVAGILEGIEGD NFSSICLSNVSLSVQSMHPWNCSLIEGYSNSVIPESCEQLRTDCGQTPICYDGGSSSA IHAQAARHRLSSASRLLNPLLKLAML</aaseq> |
| Gene Sequence |
<dnaseqindica>634..651#1506..1823#2096..2216#2308..2482#2579..2649#3225..3952#agcttggctcgcctctgctccgcttcgcctttgctccgacccggtcggcctcgccgccgtcgccgccgccaccgcatcacgcgcgcgcgcgcgcgacggcgcgagcgcacgggtgaggtgagagaggggtagtagagcagcagccgcccccgaccgcccacgcccgggccgggtggtggagcacaccgtggcatgattgggtccatggcctcctgaccccgcctccctctcctcctcctctgctccccttttgctgctgttgctgcttcctactctcactctgcttctgctgctcaatccacctgctcctctccttctcttctctctcccgagcggccgagaagaggcgaggggagaagggaggacttgattcttgcttgttgctgatccattctttcttgctctgctctgctcttgtgtggtgtggtgagcaatctgtgctggctcttctcctttcctgctctgctgattcttcgtttctttcttttctttttctttttttctgacgagcttggctggtagctgttcttgcagtgtgtccaggcttgccgcattaaaggagaggtggtttttgttgaccctgtttagcagcagcagcagcagcagcgaccaagatccgtctcgtcggggaagatgaggagatctgcatctgtatgcttccaatccctctttagctttgggataatgaggttgtgctctgctgacactgtagctttcttgatctctctgggggagatggatgccggtttggagggtggtagcagggttttggtgggatccaatcatccaagcacacacattgcagtttctgttccttccttctttagtgagtgagtagtggattggggattggggctggtgatctagctacaggctattacaacacaccattttgggggcttcttctgcggtggcatgggcactggatagattggtgttggtgctatgatgattttgtttggcattgggtagcattggcgcgtgtttgatctgttttgtgctaaggttgtgttgagcactggcattgggaggaactagaggccagatgttcatgctgcttgcgtttttcctgccacttgattgaaatgttcttttgggatcataatatcatgtgcttggctgaacagtgaacacttttgttgagactcgtcatgattagttgcgtttctttgatccaaaaaattgtttttccatgtagcaacttcagaggatacatggacacattgtttagctaaatatttggactttctagtttattcatgtaaaatattttttttgataggaaaaatacatgagactaccctaaattgtgcttgattggtgtttctgacacaagtagagacaagtttattcagatctatgaagaattatgctctcaaagatgcataattctggacaatttgcatcacttgtgttcatagatggaagtattcatgcttaatctgtttagtgttgatgctaatatgtgatggatactgatactgttctatttgaatttatgctagctactccgagtccttttggttttcataaccatggttgggactcaatggtccaatgtatccagtacatactgcaaggacatggcatcaagcgtatatcgaccccacagtgtcacaataactgaatttggtgctgttggggatggtgtgactctcaataccaaagcattccagaacgcaatcttctacctcaattcatttgcagacaagggtggcgcacagctcttcgtgcctgcgggaaggtggctgacagggagttttagtcttatcagccatctcactttgtcactggataaggatgcagaaataattggatctccggtaggataactcacatactttgcacatgataattacagccaaaatatttttgtgtgcttatgacatggtgctcgtgcacacagtatcatatattgccaaatcttatgttgatcaattgttccctaagaaccttgatatgaacactaaaatggtatttcgtagagacttgcacaaattcagttttcttgaagtttagaaaaaatgattaattaaatatttactttaattgatacagaatgtttttgttataatttcccaaatgtatttttcaggattcatccgattggccagtcattgatcctcttccatcctatgggcgaggtagagagctccctggaaaaagacatcagagtctaatttttggaactaatctaacagatgtaataattactggttagtaagtactatatctgcaccatgcatttctcttgggatgttactgtagttattttgtcagtatgtaaaaatctggtactcttggcaggcgctaatggtaccattgatggccagggagccatttggtgggattggttccacagcaacacactgaattatactaggccacatcttgttgagttgatgtactccaccgatgttgttatatccaatttaaccttcaagaactcaccgttttggaatatccatcctgtatactgcaggttggttgtctgaatagccacttgctttctgttaaatataagaattcattcacaactgtaaatttattgtctagagtgcttttgctaaataaacagccaagtgcttgtccagcatgtcacaatcctagcgcccctgaattcaccgaacactgatggcattgatccaggtaatatgaagttctgaatcattatctcccttcaatttaacctgattgttcataatgtcttacttcctcacttttcccatttagcattgcattgcattaagaaaaatggcaaaagaaaaaagtgactgcaatatcaatatgtcattcacaggctctttcttcaatttgccctgctttgtgcttcaaaatttgaaaaaaaaaaagaatccttagaacttccacttactgctgagattctggacatagaagttctcaaggaatcttcacccaaaaaaaattctgaaagaagattaaaattgttcttttgtgaagtgatcgtttatactctgctagagttttgaggtaccaatagaaaaggtattactgttttatgcaaaattaccaaaaaaagatagccctttaccactttggcaaaaaacactgctatgcaacagatacatttattttgtgatattctttcttgagatgcaactttaaccaaggttacggtacaccagttatgtattaacactatatatccatttagcatatttgcatctataactgtggtactaatggagcttcaatccattcagattcgtccacaaatgtctgcattgatcattgttatgtcagaaatggagatgatgttattgtcataaaaagtgggtgggatgagtatggcatttcctttgctcgtcctagcacaaacatcagtatcagcaacatcacaggagagacaaggggtggtgcagggattgcctttggaagtgagatgtcaggtggcatatccgaagtccgggctgagggtctccgcatcgtcaactcaatgcacgggatcagaatcaagaccgctccagggcgtggagggtatgtgaagaacgtgtacatatctgatgtgagcatggacaatgtttcgatggccatcaggatcaccggaaactttggtgaacatcctgatgacaaatatgatagaaatgctctcccaatgataagcaatattacaatcgaaaatgtggtcggcgtcaatgttggtgtcgctggcatcttggaaggaattgagggggacaacttcagcagcatttgcctgtccaatgtttccctcagtgtacagtctatgcatccctggaattgttcgcttatcgaaggttattcaaactctgtgatcccagagtcatgtgagcaactcagaacagattgtggacagacaccaatttgctatgatggtggaagttcttcagcaatacatgcacaggcagccagacatagattgtcgagtgccagcagattgctaaatcctttactgaagttggcgatgctgtagagtaggtagagagatgctctatttatttgctgcagaggggcttttgcttcgtgggatgcgtcatgtacatctgattcttgcgattgttttttttttattagcacgatgtttgcttcttgtatatagttgtgggagatgaatgttggtgtaccatgcatgtttttgtcaccatctttgatttgtgatgtatctgttccatagccttttgttgggaagaaaacagtatgatcctccttccaatatgtccagttttgtggatagggtcatcaaaattgtaacttgtaagttgagtagcaacaagagagaagagtcagttttaatc</dnaseqindica> |
| External Link(s) |
