Difference between revisions of "Os03g0851300"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os03g0851300| Description = Proteasome component region PCI domain containing protein| Version = NM_001058449.1 GI:115456626 GeneID:4334802| Len...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os03g0851300|
 
GeneName = Os03g0851300|

Revision as of 19:46, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0851300

Description

Proteasome component region PCI domain containing protein

Version

NM_001058449.1 GI:115456626 GeneID:4334802

Length

4022 bp

Definition

Oryza sativa Japonica Group Os03g0851300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:36684706..36688727

Sequence Coding Region

36685106..36685324,36685419..36685496,36685585..36685738,36685826..36685938,36686034..36686133
,36686740..36686936,36687017..36687073,36687177..36687281,36687371..36687478
,36688198..36688395,36688569..36688571

Expression

GEO Profiles:Os03g0851300

Genome Context

<gbrowseImage1> name=NC_008396:36684706..36688727 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:36684706..36688727 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagggtaacagtaccaacctcgatgcggcgatagagtcgctcctcaacgtggagaagcagatgaggctggccggcgatgtcgccggcacgaggaaggccgccatcgacatcgtcgagctctgctacaaggccggcgcctggaagacgctcaacgatcagatcgtggtcctctccaagaggaggggccagcttaagcaggctatcactgccatggttcagaaagcaatggagtacattgacttaacgccagacatggacacacgtattgagctaatcaagacgttgagcagtgtatctgctggaaaaatatatgtggagatagagagagcaagattgatcaaaagacttgcaaaaatcaaagaggagcagggacagattgatgaggctgctgatttaatgcaagaagttgctgttgaaacatttggctccatggcaaagacagaaaagattgcattcattctagagcaggtccggctgtgcttggatcgtcaagattatgtacgcgcacagattttatccaggaaaatcagtcctagggtatttgatgcagacccgtcaaaggaaaaaaagaaaccgaaagaaggtgataatattgttcaggaagccccagcagagataccttccctcctggaactgaagcgcatctactatgaactgatgattcgctattactcgcacaacaatgattacctggaaatctgccgttgctacaagtcgatttatgaaattccatcaataaaagaggatccatcaaagtggataccggttcttagaaagatctgttggtatttggtgttggcgcctcatgatccgatgcaatcaagccttctcaatgccacactcgaagacaaaaatctctccgagataccaaatttccggttactgctgaagcaacttgtaaccatggaggtgattcagtggacaagcttgtgggaattctttaaagatgaatatgcgaatgagaagaattttctcggaggagctttgggtgacaaagctgcagaggatctgaaattgaggatcattgaacataatatcttggttgtttcgaagtactattcaaggattaccctgaagaggctcgcagatcttctttgcttgagcttgcaggaggcagagaaacacctttcggacatggtaaactcaaagtcgctgattgcgaagattgacaggccaatgggtgttgtatgcttccgcacagcacaagacagtaatggtatactcaattcctgggcggcgaacctcgagaaactcctcgatcttgttgagaagagctgtcaccaaatacacaaggagacgatgatccataaggcggtgttgaaagcttaa</cdnaseq>

Protein Sequence

<aaseq>MEGNSTNLDAAIESLLNVEKQMRLAGDVAGTRKAAIDIVELCYK AGAWKTLNDQIVVLSKRRGQLKQAITAMVQKAMEYIDLTPDMDTRIELIKTLSSVSAG KIYVEIERARLIKRLAKIKEEQGQIDEAADLMQEVAVETFGSMAKTEKIAFILEQVRL CLDRQDYVRAQILSRKISPRVFDADPSKEKKKPKEGDNIVQEAPAEIPSLLELKRIYY ELMIRYYSHNNDYLEICRCYKSIYEIPSIKEDPSKWIPVLRKICWYLVLAPHDPMQSS LLNATLEDKNLSEIPNFRLLLKQLVTMEVIQWTSLWEFFKDEYANEKNFLGGALGDKA AEDLKLRIIEHNILVVSKYYSRITLKRLADLLCLSLQEAEKHLSDMVNSKSLIAKIDR PMGVVCFRTAQDSNGILNSWAANLEKLLDLVEKSCHQIHKETMIHKAVLKA</aaseq>

Gene Sequence

<dnaseqindica>3404..3622#3232..3309#2990..3143#2790..2902#2595..2694#1792..1988#1655..1711#1447..1551#1250..1357#333..530#157..159#caaaacggccaccaccacaccacagagagcccgagagccctactccccttctctcctcttcttcctctcccgcaagcaaagcgcacgccgcctttgccttagatctcctcgactccgccgccgccgccggcgcctccccacggtccctccctcgccatggtgagctcacctccctcctcccctcccccaccccgaccctccgcccgcctctccggggttttggccttcccgcccgccccgccgcggcccgcacttctcatctagggtttcgatctcttgcgggttgatctgatgccttgcaatctgaccctgtttcttgtggaccgatgcaggagggtaacagtaccaacctcgatgcggcgatagagtcgctcctcaacgtggagaagcagatgaggctggccggcgatgtcgccggcacgaggaaggccgccatcgacatcgtcgagctctgctacaaggccggcgcctggaagacgctcaacgatcagatcgtggtcctctccaagaggaggggccagcttaagcaggtcaagctctcgtcctctcctatctttggacttcgtttagtagttctagttgaattactagctgtatttagctatctaactgatatcttcaaagttatactctactgactagaggcacatgcaaaccccaaagtttccgaggagcacatgtaattgaggctaacatagcatacccacctgctattatgttgtcactctgaatcaccagccattgattttatttttgtaatcttggtatgaacttagagttattctaagttctagtgatcttaaatagattacacaattcaaattatcaacgctcactgaaagacaatagtcatattttgctcgatgtaattggatatatgcccttatttctaagggatactggtggtagggaaggcatgccatagtgttgtgtaagattactcttttctttgcaaagcattatgtgtttaggttgagtttcaactaatgttttgttgagtgctaatcgagtgcattgtatatttcacttcgaaacaatatttgcatgcatttttctccccccaaaatttcagcattgtctctccatatcccatacttaggtcttcctgaaatatccagttattatttacaagttgaacaatatttcataaatcatgcctgtttatgtatgcaatactattgctgctgcattataacttggttatgcacatgtggcatgtctcaactcttctaattctttatttttacaggctatcactgccatggttcagaaagcaatggagtacattgacttaacgccagacatggacacacgtattgagctaatcaagacgttgagcagtgtatctgctggaaaagtgagaatcatggctactcaaatattgcttacctataagatttaatgccctttcatgtgtgtaatctcactgatatgcatcaactgtagatatatgtggagatagagagagcaagattgatcaaaagacttgcaaaaatcaaagaggagcagggacagattgatgaggctgctgatttaatgcaagaagttgctgtaagttcaagctgcactataatcatggcacacagttacatctactataaccaccatagtgttgtcttcgcatctacataatgtctaacaagttcatcctcaggttgaaacatttggctccatggcaaagacagaaaagattgcattcattctagagcaggtatgaagaaatacagtaataaagcttgaaattgttacaaaagcctgggttctggaatcttactgtaatcatgatcacaggtccggctgtgcttggatcgtcaagattatgtacgcgcacagattttatccaggaaaatcagtcctagggtatttgatgcagacccgtcaaaggaaaaaaagaaaccgaaagaaggtgataatattgttcaggaagccccagcagagataccttccctcctggaactgaagcgcatctactatgaactgatgattcggtatgtcttcctgctcagtgagactaattcatcatgagttcatgtcgcttctagtaatgttggttgaagttaatgctaccccctcaggtcgcaaaatatagctacctttagctatgaatatggacaagttcagattcacagataaaggtagctatattttgggatggagggagttctattttgttcagcaaagaattgctttcgactgtttgattcatgatctaatacatagtgatagttaactatttagagttttctgctaagtcaatctaatgcttggttgattaaacaaaagaactaatgtggtgtcatatcccttactgctattagacaattgtttatgtagcttgtattttatttactcaggaaatatcaattcctcttctgcggttacctgtcaaatatgtttgcgattgtttaccatcatcatgttatggttactgcttgaatgccttatttgtatccatcaacctttttttatgctacaattatgaatactgtatttgtgctgtttgaattctcgctaactgattttataacctgctaagagtatatatttttttctatatatgtggtgaaacatgatttctgtttgtctctattcagctattactcgcacaacaatgattacctggaaatctgccgttgctacaagtcgatttatgaaattccatcaataaaagaggatccatcaaagtggataccggtaaagctctctcattcgcaagtcttacttggtgtggtgtgtgcgcatactcactcacgctataatggttatctgactgcctgaattcgctttaggttcttagaaagatctgttggtatttggtgttggcgcctcatgatccgatgcaatcaagccttctcaatgccacactcgaagacaaaaatctctccgagataccaaatttccggtacgttatgttgctttcaggattacaaattatcatggtttttaatgttctttctaattcctacttttgctgtttggatgggaataggttactgctgaagcaacttgtaaccatggaggtgattcagtggacaagcttgtgggaattctttaaagatgaatatgcgaatgagaagaattttctcggaggagctttgggtgacaaagctgcagaggatctgaaattgaggatcattgaacatgtattgcttacttgactttatcgtatttctcttttggttccttgctttgtatttgtcagttgatttccagttctttgcttttgttcagaatatcttggttgtttcgaagtactattcaaggattaccctgaagaggctcgcagatcttctttgcttgagcttgcaggtttgtgttcccagccttcctagcatcacttgtattcctcttgttactttgtagcctaccaagatctaacatgccccacatttttctcattcaggaggcagagaaacacctttcggacatggtaaactcaaagtcgctgattgcgaagattgacaggccaatgggtgttgtatgcttccgcacagcacaagacagtaatggtatactcaattcctgggcggcgaacctcgagaaactcctcgatcttgttgagaagagctgtcaccaaatacacaaggagacgatgatccataaggcggtgttgaaagcttaatctgtaaaccattttgcattggctggcttgcttaggttctctgcctggccttctatggtcaaattttacaatcacaggacgtcaagcttttctcagctcaagcatcacctgtttgctttgggaactcgtgcgtgaatgatcttaaatactgtgaccacagaatgatgacatattatttgttgttggggttcaatcgctgtcctccaatttgcttaacatgtgtatcttcccgaatattatttgaattctagattattcaatcagatgcctggcttgttttaggttctgcagatgcgctggttctcaatatgatctgatctgtaacgcgttcgttgtgattttaagtttctggagatgcatcatatgtggagaagataaaactggagatcttgtcgtttgc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0851300, RefSeq:Os03g0851300