Difference between revisions of "Os04g0112300"

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(Created page with "{{JaponicaGene| GeneName = Os04g0112300| Description = Eukaryotic initiation factor 3, gamma subunit family protein| Version = NM_001058572.1 GI:115456873 GeneID:4334938| ...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os04g0112300|
 
GeneName = Os04g0112300|

Revision as of 19:47, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os04g0112300

Description

Eukaryotic initiation factor 3, gamma subunit family protein

Version

NM_001058572.1 GI:115456873 GeneID:4334938

Length

6475 bp

Definition

Oryza sativa Japonica Group Os04g0112300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:706362..712836

Sequence Coding Region

706674..706781,707255..707341,707431..707536,707619..707727,707800..708062
,708542..708635,709385..709509,709667..709708,710856..710926
,711013..711094,711191..711311,712438..712559,712650..712747

Expression

GEO Profiles:Os04g0112300

Genome Context

<gbrowseImage1> name=NC_008397:706362..712836 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:706362..712836 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcgattccccgggaggcatgggagggctgcagcgtcctcctcgacatcaacgacggcgaccgcctcgccttcttccgcctcacccccgccgcgacggtcaaggtggggaacaggacctgctcgctgcagccgctcgtcggtcgccccttcggctccctcttcagcgtcggcccctccggcctcgtcccctgcgccgacgccccatcttctcgcgatgatacaacgcaagatgctgctgatggtccctcgcaggatgaaactagggacaatagatctcttgtcgataataatacagcacagaatttatctagcgatgacatagaggcaatgaagagagatggtgtaagtggtgatgagattgtagaagctttgatagcaaatagctccacatttgggaagaagacccttttttcccaagagaaatacaaactaaagaaacagaagaaatatgcacccaaagtgcttttacggcgcccctctacccgaagcatttgtgagacatatttcaagaaaagcccagctcgaacagggtttatgcgagttgatgcactgtccctcttgttgtctatggcaaatgttggtccatattcggatgtccttgtggttgatatggttggaggtttagtagttggagctgtagctgaacgcttaggaggtactgggtatgtttgcagcacatatcttggatctgctgctagctccatagacattataaggatgtataatttgagcagtgacatgactaccaggattgttcaggcaccactaagtgacctctgctccttgcaaaactctgtcgatgtgtcttctggtcttaatgatagcattcagggtgaggcacaagagcccactgcagtaccagtggagaatactcagccatctgtaccacaaccaactgacacagcagtaccagatgagaaaacacagtcacctaaagaacaatctattgatatagatatccctgagcccttattggatgagcacattaatcaggatggcaattcttctttagatagtaaaggagatgaggatggaagttcaataggtcccaaatcactcaaggcaggaaaggcaccatcaccagagaggatgaaatattggagtgaacatggatttagcagtttgattgttgctgctccggggcatgatgttgaaagttttgttgctgatctgcttcccctcttgtcttattcagctccatttgctatctatcaccaataccttcagcctctcgcaacatgcatgcacagcttgcaagtatcaaaaatggctctcggattacaaatttctgaaccctggcttcgtgaataccaggtccttccatcacgaactcatccacacatgcaaatgaatgcatttggtggttatattttgagtggcattaggatacacaatggcgatgcatgtaatggaagcaagtga</cdnaseq>

Protein Sequence

<aaseq>MAAIPREAWEGCSVLLDINDGDRLAFFRLTPAATVKVGNRTCSL QPLVGRPFGSLFSVGPSGLVPCADAPSSRDDTTQDAADGPSQDETRDNRSLVDNNTAQ NLSSDDIEAMKRDGVSGDEIVEALIANSSTFGKKTLFSQEKYKLKKQKKYAPKVLLRR PSTRSICETYFKKSPARTGFMRVDALSLLLSMANVGPYSDVLVVDMVGGLVVGAVAER LGGTGYVCSTYLGSAASSIDIIRMYNLSSDMTTRIVQAPLSDLCSLQNSVDVSSGLND SIQGEAQEPTAVPVENTQPSVPQPTDTAVPDEKTQSPKEQSIDIDIPEPLLDEHINQD GNSSLDSKGDEDGSSIGPKSLKAGKAPSPERMKYWSEHGFSSLIVAAPGHDVESFVAD LLPLLSYSAPFAIYHQYLQPLATCMHSLQVSKMALGLQISEPWLREYQVLPSRTHPHM QMNAFGGYILSGIRIHNGDACNGSK</aaseq>

Gene Sequence

<dnaseqindica>6056..6163#5496..5582#5301..5406#5110..5218#4775..5037#4202..4295#3328..3452#3129..3170#1911..1981#1743..1824#1526..1646#278..399#90..187#acctctccctaaaaccctcccctctccatctctcctctgcttcgtctctcctctcctctccgccgctgcatcccctccaaaaataaaaaatggcggcgattccccgggaggcatgggagggctgcagcgtcctcctcgacatcaacgacggcgaccgcctcgccttcttccgcctcacccccgccgcgtccgcacctcccttcctcctcgacctcgcgtctcctcccttcccccccaaaaaccctagacctgatttccctctcttccggtcgtgcaggacggtcaaggtggggaacaggacctgctcgctgcagccgctcgtcggtcgccccttcggctccctcttcagcgtcggcccctccggcctcgtcccctgcgccgacgccccatcttctcgcggtatgcaatgcccgatgggggtgatttcctttttgtactgcttgtttgctcctgcattcgctgtgggctagacccgcacagtactgaacgagtgctcagaactgaactaattgctagtagtagtgaatacttgaagcaggggattgtcatttgacttgatgtcgtattgttcactagtttagtttagttatttctttgtctgcaatcagccgaacttgtatcggtttatagcttatacaggagttagatttggtgaaacgttatgtaaattgtgagttcatctgtagtttgcactcttcttcagttcttttccttccttttcttttcttttttacatcacctttcatccagcttcaccctatataggatggtgacttcttaattaggctctagttgtttcagaatttcagggctggtgtgcatatgttggactgtgatgtgtcaattgtcattgcttatagtctgctaagattttgatttaatgatgggttctagttaccaaatgtacaaatgtggaccttaacacatgcactgtagttaccaaggcatgatttcacattgttcagttctctcttttggcaggcagcacatagaatttgttgggttgtttcacaaggaatttcatagctcccatggaaaaaaaataacatatacatttgcaaggtgacatccatgtgcagttgtatctaataaagccaccgtttccataacgcaagcaatatctggaaaatagtataatcgaagaatttaaatttattatgttaaaccattttctaagaaaactaaagtatgagttaaaacatgccttgtttcatcaggacacattccctctcatcaggacaccaatttgtttcaaaattgtaatcaagttctattcccttccacacgttccctctcttcttacttccactgttccacatttaggacgaatggtggtggtggtgcaattgagaaaaagtactctcaaagtcaattagcttatcctttttaaaaaaatgtcctgctacaaatattgttctagttgagttatcttacacatggtttttgatcagttcgtgtactcatcgatatagttcatagtttgtactatttcttgtttgtaacaatggttcccatttacacatagatgatacaacgcaagatgctgctgatggtccctcgcaggatgaaactagggacaatagatctcttgtcgataataatacagcacagaatttatctagcgatgacatagaggcaatgaagaggtgagggttcagttatctttgagtaagctatgcttgattgttttgtgtaaatgattccaaatcatgatttatgtactgtttgattgtccaaaacagagatggtgtaagtggtgatgagattgtagaagctttgatagcaaatagctccacatttgggaagaagacccttttttcccaagttagtataatttgttgtctagttgcttcattactttttttctaagaacactggggattgaattggttcaataattctgattacaggagaaatacaaactaaagaaacagaagaaatatgcacccaaagtgcttttacggcgcccctctacccgaaggtaatccttctatcgtttccttgtagttgggaatatgctatatcattctagaaatgaatattatctattcacattttatcatttagagaatcatcttttaccctcttaatttaactgcaaggttgcatatccactttaagccccatttggaacacaggaatttcacaacatctttttgcagaaatttcaattggaaacagtttgaatagcaggaacagaaaattgtccgggttcgaaataagtccctatgctgaatatgtgattgaagtttgtgaaacagctttttaaaattatcgtgtcaatggaagattgcttcagattaggagtatagcacaaccaggaaaacaatctttgtttttattataaattttccacttgattgaatgaaatatgctctgctcccattatgtttagtactccctccgtattttaatgtatgatgtcattgactttttgaacaatgtttgaccattcgttttattcaaattttttgtgtaaatatgaaaatatttataccatcttaaataacatttaatgatgaatcaagtcacaataaaataaataataactacataaattttttgaataagacgaatggtcaaacgttggataaaaagtcaactgcgtcatacattaaaatatggaggtagtaattagtacttttgttgtttgaatgtcactgtagcctctaaaatacaaaacaaggtgctaatcagttcttctctttatgacctatttactcctctttaatgtagctccaacaggaagcaccaagtccacccacaaattcaatttttgttcctaatgccagtaagaataaagcacatcgaagggaaaaaagactacctaagaaagcctaaaaaacatctgttgagaacaagaccaagtttttttaacatcatcttaaagataatgggagtatgatgcttgttggctttttgatatttttttctcctcattaccaatgcaaaatataatatcaaatgaagtgttttttcaagaaagttgccctgaatgcctgatcttgaactaactccttacatctgatctgtgaaatgcgttgcacattacaatttgattgccagatgcttatctagaaggtgcgcatatttatctgaccctttcttttttcctttcaatgctgcagcatttgtgagacatatttcaagaaaagcccagctcgaacagggtaaatattttgctagttcatttgcaatcccttattggcattgccattatactccatttcagtattacttttggctcatatgcatataccttgcttttctaaaacaagcaaattacacatagcacaacccttagttactatattctttcctttctaggtttatgcgagttgatgcactgtccctcttgttgtctatggcaaatgttggtccatattcggatgtccttgtggttgatatggttggaggtttagtagttggagctgtagctgaacgcttaggaggtaacatattcctactttttttattttactgataccagtagattaaattacatgtacattaacaaatttaatataattcaaccgtacgcatgtatatgcctcatgtaatagcttttgctgaaaatgcattactctttacctgcttgtttttgagaatgctagattgctagttctactcaccataacttcagtcagtggacgtagaaatgtcatttattttagttggtgtattcaataacaagtgatatgcatgtagttatctattccttaagtcacactgcctgttgctacaagcgctcaatgtatattcactatgtacagaagctacaggcacccatgaacttgaaacgtgctcatatatattcatatacgaattagaactgattttcaggtttttctaagcatctctattataatgcatctatttgttagttgccactatcacagtgcctgctattgtgagggatgttgtataaatattttagaagatcttaaattaaaatgccaaatttttgaataaaaagattgaaattgtatacacaggattgtatgagatcaatcagacacctatatacacgtatgcagataattcaattttatttataaatctttcaaagcacacctgtacatgtattcagctgcaaaatgtcttctggagtggggatggctgtactctcgtagagtactatgacccccaaagctgcttttatgagtaaagattatttttagtgattttctctgtattacaggtactgggtatgtttgcagcacatatcttggatctgctgctagctccatagacattataaggatgtataatttgagcagtgacatgactaccaggtaatttctttatttagcattatgtggattttctgatgataaaagaagttttaattagagggctcctgaaataaatatgtgctaattttacatctatactggattatgttaaggaaatagtaaaaagtgcaaaatggttatatatttttctagctatgcagttcttacacaactattgcttattgaatcgtggttgcatttctcagatataatacaatacactgtctttcacttcttgtatcatgaaataatctttgttcttgagcaattagggcgaactataatattacttatatgttcatctaattttataccatgattagtgccatgtagaactattatattctcatttgaacttatagaggtccatgtgaagcctttgaagttattactaaagtaggaaacacccattatgttgttgaagtggtgcttaagagttgggctatagcaggtaatattttgataagcttacctttcaggattgttcaggcaccactaagtgacctctgctccttgcaaaactctgtcgatgtgtcttctggtcttaatgatagcattcagggtgaggcacaagagcccactgcagtaccagtggagaatactcagccatctgtaccacaaccaactgacacagcagtaccagatgagaaaacacagtcacctaaagaacaatctattgatatagatatccctgagcccttattggatgagcacattaatcaggatggcaattcttctttaggtaagcaactgatagcactaacatgaaaaaagtatacatttgtgacttatttgatgctgtgttggtctgtagatagtaaaggagatgaggatggaagttcaataggtcccaaatcactcaaggcaggaaaggcaccatcaccagagaggatgaaatattggagtgaacatggatttagcaggtaacactgtaaattattgttgaagaaaactgcactaatagctacatattctcattgataaactgatttcatgttgatgcagtttgattgttgctgctccggggcatgatgttgaaagttttgttgctgatctgcttcccctcttgtcttattcagctccatttgctatctatcaccaataccttcaggtaaatctttcttagcttcaattttttttaatcatgatttctgcttcctatgtaaaatatgtgtgtgtttttctattgccttcatgcagcctctcgcaacatgcatgcacagcttgcaagtatcaaaaatggctctcggattacaaatttctgaaccctggcttcgtgaataccaggtcagtgctctgctcagtacattagcaatgaggaagttagacctgaaattgttgttcctgagttatggcatggtttttcttaccaatgtgcacataaccaaagactatttcacaagttatgtttagctggcagctaaattgcaaagagtaaattgaatatttgaaagtacatatggaattgtcaaggctattctaatagggctggttacaatgcaaattccttttgtcattctactatgcatgatatgcccactaactttgcttataacaatagcatcaacatatttagaaacagattttatttactattatatgagacacaagaaagataaggttattgctttgacatgatgacatccaacaaatcttttatcgcttttccggttttcgcagaatttttattttactgctgtccacaacttctaagaaatagctgttggaacttattacggtattccctttccttgttacaggtccttccatcacgaactcatccacacatgcaaatgaatgcatttggtggttatattttgagtggcattaggatacacaatggcgatgcatgtaatggaagcaagtgaatgaccaagcccgtcaatgcgtgcttctatccttggaattaaaatatggtcaccattttacacggtaacctgaaacaatagacacaattttgtagtccagagaagccaacttttatgctgaagcgacttatgtgattagtagaaattggtgcgcatatagagaataactagtgcgagttctagaagaaaatgaaatgagcatgtacaccaaatccatgtagcttacataacaatgttgtgtttgtttatcaaccaaattgaaacgcttgtggactttgagatatttgttaaggtgtgctacttactatttgt</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0112300, RefSeq:Os04g0112300