Difference between revisions of "Os04g0221600"
(Created page with "{{JaponicaGene|
GeneName = Os04g0221600|
Description = Zinc finger, FYVE/PHD-type domain containing protein|
Version = NM_001058804.1 GI:115457337 GeneID:4335199|
Length =...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os04g0221600| | GeneName = Os04g0221600| | ||
Revision as of 19:49, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os04g0221600 |
|---|---|
| Description |
Zinc finger, FYVE/PHD-type domain containing protein |
| Version |
NM_001058804.1 GI:115457337 GeneID:4335199 |
| Length |
8838 bp |
| Definition |
Oryza sativa Japonica Group Os04g0221600, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 4:8109840..8118677 |
| Sequence Coding Region |
8110148..8110495,8111285..8111407,8111489..8111559,8111632..8111884,8112137..8112292 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008397:8109840..8118677 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008397:8109840..8118677 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgaaggggggccgcttgcaccgtctggagcggccgcccgccgcccacatcaccaccgccgcagccgccaccacgcccgctccggcgcccgccgatgattggggggatggctcgtggacggtggactgctcgtgcggcatcacgtacgacgacggggaggagatggtgagctgcgacgagtgcaacgtctgggtgcacacgcggtgcgcccgctacgtccgcggcgtgcacatctctttctcttgccacaactgcaaggccaagcgcgccccctcctccgccgacgaggctgaggtcgccgagctcctggccgagctgcccacccaccgcccacggccgttgtaccgccgatgggctgaagtccctctcccctcccgtgtccatgtccacgggcttccaggcggtacagacaccgccctattccgcagcgccgcaccctcccctgtattctcgtccgccctatggcgctgtgctgggtacgtacccaagagattcggcttccgctactgcgaattcccctactgggctgatgacaaggacggtgccaacgctctatttgcgctggctagagagaagcgcaaggaaaaggcagagactaggttccctctccgccttggagccatacacaaggacaagaattatgtcaggacgctgagcatttgcggcgataaggtggatggcgttgagcactctgtggacgatgacgcaaagaggacatctccaccaagtgatgcaaagaagagaggaacatccattagcattgtagagcctgatacttgggacaatggttgtgagaagaaaagggattttgatgtgccagctagtgaggatcagcatgccaaaacaaacatggtaaattctgatttgcacgtgcttgttgaagctaagaagaagagggcttcatcctcagaacgaagtggggataagaagtgctctgcctcgaaggaaattactgggatgctaaagaaatatgaacctaaggagtccaagcgattggtgatatcctcaggagttgcaacaacggcagctgtagcagagcaagaagtgcactcacgatttgtgaagggtagcgtgtatgaaggactagacgggaatcaaaatgtaggtttacagactggagtaagatcgaatggagttgtgaaaagggatgatgccaaacgatcaaatggagatgtccagagcgatgctgctcctgagaaaatgaatgagggtctggatcttcagaagcaatcaaatcaaacttcaaatcttctggttgttggtggtgtaccggatttacagactaaccagtcagaatcattgactatcaagaaggaagcatctacagatgatcatgagagaaccgaggctatccagtttgtaagtgatgagcataaaagtggaaaacaagatactgcaatgttatcaacccttcagaggcattcgtccaagttagcatctgacttagtttatcaacatccaaagtctgaaacacaaaatccgatgcacacaataccagagcatccaaactcaagtttagaaccatcatcagaagaaactactgttcgtttggtaaagaaggatcagacaaggttggtctcatccgctgacagcgaaaatgattttgcaaaaaaatctgagagttcccaggatcgcacaagatcctctgataaagttcaattgaaaggctttgttccgtctgcgccaaaatcatctcaaggaagtagaacatatgtatcttctgccaaaaatagatttatagtgccaaaggagcagttgcaaaagacatcaactgaaggaaacgctccaccagggtcattacaaggtgaagtggcacccttacattctcgtaataaggcaatgcctttgagcttttaccaaagaaaggacaagatccaccaccgctctattcatatcacacaggacacttccaatagttcagcatcggctgagctgcaatctactgaaacaacagcttcattgagcgatgaacagcttgcattgttattacatcaacaattgaacagctcccccagagtaccaagggtgccacgttgtcatcaagcatctaccatgcagatgctacatccaactggagctagtgtgttctcaaaacggtcttcagcacatggaggaagggatcaagcactggtcttaaagaagaggaacaaagatgatgcatggagagataatgatgagaccaagaagacaggaaaggtgtctagtgttgaacggaggcatagagatagtagcacagaacgtgtccttgctgcaaaagactcatgcaaatttactgaaaatatagaatcagaacagagaaatcgtggcatttgttcaactggagccacctctggcgtaggaaatgatgctccaatagatagaggtgtttcacatgatttacctgggttgattgaggaaatcattagcaaaaatacaaacataacatatggtgaactgtgcaacgctattcgccagcattggggggatttaagtaaacccaacgtggaaaacaatgcataccccaactatttacatgctgttaacgattgtcttaggaacaggaatgactgggctcaccttgttgaccaggctgcaatgatgaatccaaacaagcgccggaaggtagaggaaagtgactctttgtcagcagatgtactggcaaccgagaagacaaataaagaggctaaaaggggtccagaagacacaaatgctgaatcacaccatgaaattctgccaaggggcaaacgcaaggctcggaaatgcaggcgtcttgaactgaaagggaggagagtcaacgatacgaggaagagatctagctttgattcggcctctgatgatgatgataccaccttgtcggattccagtagtgacagaaatgacacccctatggataagagcctagaagatagttttgttatagctaagaatgcagattcaagttcatag</cdnaseq> |
| Protein Sequence |
<aaseq>MKGGRLHRLERPPAAHITTAAAATTPAPAPADDWGDGSWTVDCS CGITYDDGEEMVSCDECNVWVHTRCARYVRGVHISFSCHNCKAKRAPSSADEAEVAEL LAELPTHRPRPLYRRWAEVPLPSRVHVHGLPGGTDTALFRSAAPSPVFSSALWRCAGY VPKRFGFRYCEFPYWADDKDGANALFALAREKRKEKAETRFPLRLGAIHKDKNYVRTL SICGDKVDGVEHSVDDDAKRTSPPSDAKKRGTSISIVEPDTWDNGCEKKRDFDVPASE DQHAKTNMVNSDLHVLVEAKKKRASSSERSGDKKCSASKEITGMLKKYEPKESKRLVI SSGVATTAAVAEQEVHSRFVKGSVYEGLDGNQNVGLQTGVRSNGVVKRDDAKRSNGDV QSDAAPEKMNEGLDLQKQSNQTSNLLVVGGVPDLQTNQSESLTIKKEASTDDHERTEA IQFVSDEHKSGKQDTAMLSTLQRHSSKLASDLVYQHPKSETQNPMHTIPEHPNSSLEP SSEETTVRLVKKDQTRLVSSADSENDFAKKSESSQDRTRSSDKVQLKGFVPSAPKSSQ GSRTYVSSAKNRFIVPKEQLQKTSTEGNAPPGSLQGEVAPLHSRNKAMPLSFYQRKDK IHHRSIHITQDTSNSSASAELQSTETTASLSDEQLALLLHQQLNSSPRVPRVPRCHQA STMQMLHPTGASVFSKRSSAHGGRDQALVLKKRNKDDAWRDNDETKKTGKVSSVERRH RDSSTERVLAAKDSCKFTENIESEQRNRGICSTGATSGVGNDAPIDRGVSHDLPGLIE EIISKNTNITYGELCNAIRQHWGDLSKPNVENNAYPNYLHAVNDCLRNRNDWAHLVDQ AAMMNPNKRRKVEESDSLSADVLATEKTNKEAKRGPEDTNAESHHEILPRGKRKARKC RRLELKGRRVNDTRKRSSFDSASDDDDTTLSDSSSDRNDTPMDKSLEDSFVIAKNADS SS</aaseq> |
| Gene Sequence |
<dnaseqindica>8183..8530#7271..7393#7119..7189#6794..7046#6386..6541#5846..6300#5384..5767#5227..5296#1214..1533#379..1123#cccctccgcgtcgccgccgtcctctgccgccgccgtcgtccgtgtctcctgtattcctcctcccctttgtgtgggagattgtctgcccaatctctggaatcgacaaggtttggtggtggcaacccgctccggcggctgcctctcgtctctccaccaccccgtcccgccgattttccgcctcgacctggtggtgcagtgctcgattcggcagttcggggcttaccgagggcgcagggtgtcgatgtgcagcccgaggaatcgcatgtaagtatgatttggttacagcaccggttgcatccttgcctcgcttcacccgctcttttgcttgcttagatccgaaggggagtcgaaattagggtttccctctactcgccgccgatgaaggggggccgcttgcaccgtctggagcggccgcccgccgcccacatcaccaccgccgcagccgccaccacgcccgctccggcgcccgccgatgattggggggatggctcgtggacggtggactgctcgtgcggcatcacgtacgacgacggggaggagatggtgagctgcgacgagtgcaacgtctgggtgcacacgcggtgcgcccgctacgtccgcggcgtgcacatctctttctcttgccacaactgcaaggccaagcgcgccccctcctccgccgacgaggctgaggtcgccgagctcctggccgagctgcccacccaccgcccacggccgttgtaccgccgatgggctgaagtccctctcccctcccgtgtccatgtccacgggcttccaggcggtacagacaccgccctattccgcagcgccgcaccctcccctgtattctcgtccgccctatggcgctgtgctgggtacgtacccaagagattcggcttccgctactgcgaattcccctactgggctgatgacaaggacggtgccaacgctctatttgcgctggctagagagaagcgcaaggaaaaggcagagactaggttccctctccgccttggagccatacacaaggacaagaattatgtcaggacgctgagcatttgcggcgataaggtggatggcgttgagcactctgtggacgatgacgcaaagaggacatctccaccaagtgatgcaaagaagagaggtgaataatttggtcaatgcttgttatttatttaattactgcaaaatgaagattcttattagtcatgagttgttggtttgtctattttaggaacatccattagcattgtagagcctgatacttgggacaatggttgtgagaagaaaagggattttgatgtgccagctagtgaggatcagcatgccaaaacaaacatggtaaattctgatttgcacgtgcttgttgaagctaagaagaagagggcttcatcctcagaacgaagtggggataagaagtgctctgcctcgaaggaaattactgggatgctaaagaaatatgaacctaaggagtccaagcgattggtgatatcctcaggagttgcaacaacggcagctgtagcagagcaagaagtgcactcacgatttgtgaaggtagaagttagtgttttctatattcaaactgcttatttcatataatttggattgcactggttcctgacaattagcctactattgattttaatgttcatagttaacctcaccaagttagccatttttctttcatcctaaacttttaaataccacttatcagaaccacattgtattggaactgctaaataggttgatagataagctaccatttgtgcatagtatgggtagaatttcttaatgctggaagcctggaaatggattggaatatggcaatccttttgagctgcataatcttttatccgtacatcagtaaatagtaaatacagtttgaaaaaactactctacaggattagaatcgatcagaaatttcattttcatacatacaacttgctcaatttggtctttgaaagtaacaaaattgtgtttcctcataaaaattttaagggagcaacttggttaaagagacgcatcaataccatggttaagtaaccaagcaagagttagttttatatcctgaattctttatccagcactaaaagttcccatgttcccctttgttaaaacctacattcaatttgctactcctcacggcgcttaagtaaaattttatcccctttgtaacctatttagggtttttggagcagttaggtaagtcgtgcaaagttgtgcccttccttgtagactcctttccattcgttgacgctgatgccaacttgtggctctctcttccttctctccacccctaagatgggagacactcctagttatgcttcccattttgccaatatccatcagatagcgaagctaacctgcagcaacttaactggatctggcacataggcgtagctggtgactggtcgtgcagctctacccacctcacttgagtgcgccaggtggaggtgagtgtgtgtgcatgatacccacccattctactctgtttgtatgtaatttcttgtatgcaagcaatttgatttcactccccacagtagcacaaagggtataaacttggtcagataaactaagcaaggaaactattagaagggcacatgttacagcattccgtttagcaattggatttggccatgtagcagtctatttgatctgcctggtctatcaccaagaagttttaaccttatgccaaagtaattccatgccccaagtaacctatgcctgtattgtcatggaacctgttcattttgagcaggagagatgcatggcagtgagctgcacctgccaatgggtggaggagcagagtggcaaagtcaccagcagacccttgcatggcgaaggtgcaaaccaggcgtgcaccaggtgggggagagcgaagggatggttgaggagtagataaagggcattttttccatttctcaaaaaaactgacaaggccaaaatgccaaacacactaacggtgagttgaactaacagaggtgacctataagggaagtgaaatttcaagtgcatggaaagtaatagtaaattttgagtggcatataaggaaacatgggaactttaagtggcaaggattttttctctttttgtttctgcttttgcctctgtagttcatcattttttttaaatgataacaaaatggtccaaccactatcatatcctcttggtgttagccatgatttaggtatgtttctttgcttacgctttcaagctgtctttttggcctttgtagtttacaaggcagtagtttctaagccacacggccacaggttcaatcataactaactatagtccacaaaagctataaaaaactacttaaatctgaatctggcttattagtacaagagtggcttatagctttgtgaagcccaatagaaagtctgtcttctgggttagacttttctggccgttaataaggataatagaatgggcctctgagttgaactatatcttgctgttcatcaccagtgcttctaccgatcaccaatgaacttcactgctagttagatcacctgttaaattcagttacctctgaaaagcagggaagatccattggggatgcggtgacggtacaaaaacaccaaccctgcccatagacagaagcctaaggacatttcctagcacagccacctctcccgccagatggatagcacatattctttgtgctcctccatgtgaataggaaggttcgtgtggttgcattctgtgtaggtgctgaagggctaggggttttgtgcgtgttgagatgggttgttattgggctgggctaaaattgtgtcctggaatagtatatgtgtatttttcatcttatactttaaatgagataatagtcctatgcatactgttaatgttttagaactgtatcagcatcaaatgcatgacttgggactattgaagctttgtaggctcatatcctccgctagtaatcccatctctcaaaaaattgattccatccttgggctaactctagcttagacggggcaggctggtggctttaggtgccacatgggtgcagcgacttgagatttggatgagactttgaagaaatggctattgggtaggtgtggcaagtatggctcttgactattgtaggtgttggctctgtggaggacctggagtgagtggatttgtaatatcccatgtggcccatatatggttttggtggcattagtccaacatggagaatttatattggttgggaccagcaaccgggtacataaacccacatgttccgaccattaatgcttttacatgagcgatctgaagacaagtgtaatcagatccttttagctatgtatgaactgcttcagtttgtgttggaaaattaataaagggtttcaatttgaatgaaaatattgacacatttagtatgagtaatgattacaaatttacaactttacgagtagttttttctaatatttagaatgggtgcagttgataagtactaccactagtcacagtttgaaatagattattgactgggtctattttagtggattatctacaccattacagatataaattaaatatattgataaataaaattaacaaatactagcttagaacaagggatccaagcaatgcagtagaagaaagtttttagtaaaacatatttttagaggtgtggaattaataatcagcgacaataatatgatgaagtagatgaaaaaaacagagtcttattatgagattttcccaactcagaatagatgtgaagaaacttcatattactttttttttctgctatgttttttttttcttttggtgaaattttgtcatgtccgaaattaattagtaaatgcataaaaggttttctttttgttcattacacattgattcatgattattttgtctacattttgtctctggctacaatgccttttggtatgaaaaagaatggtgcataattatctgacagaaaatcttgtttcttttggcatgtgaattagtattaagattctgaacttctgatacatcactgccatatgaaggcatatggtttataaattttaggttctgacgattgtaatgtaagacagatttatagtttcaagatagacaattttgtgttactaatggaacttctaagaatatttagatatgttcatttcaagaagttaattctttcaatttctgatggcttatcattagtcctgtttctgtttattttttatctatctattgagtaagcttaattactgcaatagttttagtatgtattttaatacattctataatgtgcagggtagcgtgtatgaaggactagacgggaatcaaaatgtaggtttacagactggagtaagatcgaatggaggtaacttaagttcctctggtatgttttgattaatatgaaaaccccttgaaactcactagtgtgacttatgcttggaacattacacagttgtgaaaagggatgatgccaaacgatcaaatggagatgtccagagcgatgctgctcctgagaaaatgaatgagggtctggatcttcagaagcaatcaaatcaaacttcaaatcttctggttgttggtggtgtaccggatttacagactaaccagtcagaatcattgactatcaagaaggaagcatctacagatgatcatgagagaaccgaggctatccagtttgtaagtgatgagcataaaagtggaaaacaagatactgcaatgttatcaacccttcagaggcattcgtccaagttagcatctgacttagtttatcaacatccaaagtctgaaacacaaaatccgatgcacacaataccagagcatccaaactcaagtttaggtaatgtgaaagtttgtacagcatcttctggtcctaactctaccacttttgatttatcttgctctttgctatccacagaaccatcatcagaagaaactactgttcgtttggtaaagaaggatcagacaaggttggtctcatccgctgacagcgaaaatgattttgcaaaaaaatctgagagttcccaggatcgcacaagatcctctgataaagttcaattgaaaggctttgttccgtctgcgccaaaatcatctcaaggaagtagaacatatgtatcttctgccaaaaatagatttatagtgccaaaggagcagttgcaaaagacatcaactgaaggaaacgctccaccagggtcattacaaggtgaagtggcacccttacattctcgtaataaggcaatgcctttgagcttttaccaaagaaaggacaagatccaccaccgctctattcatatcacacaggacacttccaatagttcagcatcggctgagctgcaatctactgaaacaacagcttcattgagcgatgaacaggtacggacacaataagttctccaataatttatatgtatgctgataaaattttatttttttctcatggtttcttgattttctgtagcttgcattgttattacatcaacaattgaacagctcccccagagtaccaagggtgccacgttgtcatcaagcatctaccatgcagatgctacatccaactggagctagtgtgttctcaaaacggtcttcagcacatggaggaagggatcaagcactggtaagatcactattacttcctccgtttcacaatgtaagactttctaacattgatcacattcatatagatgttaatgaatctaaacatatatgtgtatctagattcattaacatcaatatgaatgtgggcaatgctagaaagtcttacattatgaaacggagggagtactaccaaaggtcatcttttctatttctatttcaatatttcttccatctttatgtgaaaacttatgaagcttccctgtaagtgcaggtcttaaagaagaggaacaaagatgatgcatggagagataatgatgagaccaagaagacaggaaaggtgtctagtgttgaacggaggcatagagatagtagcacagaacgtgtccttgctgcaaaagactcatgcaaatttactgaaaatatagaatcagaacagagaaatcgtggcatttgttcaactggagccacctctggcgtaggaaatgatgctccaatagatagaggtgtttcacatgatttacctggtatgtaactcataccatctggttttattcagtatagaagtcaataagggtgccttattattctatctgcagggttgattgaggaaatcattagcaaaaatacaaacataacatatggtgaactgtgcaacgctattcgccaggtatgttttatttcaatttcatgtatatttattctgtatgtttcataatttgtgctaattttattattatgtttctttcagcattggggggatttaagtaaacccaacgtggaaaacaatgcataccccaactatttacatgctgttaacgattgtcttaggaacaggaatgactgggctcaccttgttgaccaggctgcaatggtgagatctcgactttcatcctttccttttcattttgtcgacagttgtaattccttctgagtattgtggttacatgaactgatttgtgcctccttagagcttagatgatggttgatttcattttatatcttttagcatgtgtggttgagtcacttggtacattcaatgctatttgctaaatacagttgcatcttcaaataaaattttctgcttgctcatggcatgtaattcttaggtgccagctaaaggcgtatgcttgtcttctggggatcttagtgaactaataaaattttcttcatacagttttattcatttgaataaagaaaaccttttaggtcgttttgctatgcattttgtacaaatgtaccctctcaaaaatttattccatgaatggacccctggctcagcactagcctcaaaggagttgtactgtaatgtctcagccattcttataggtgctgagttgtcggctgcactaacatgacagtcagatcagcagcacgtcagtgccagtgagcttggtgttgacatgcacaaggtcaactccggacctcctggtgctgatctgtcagaatgctgcaatcttggcactggtcgtgtgccaaaaactcagcaccagttagttattcgaatgacccaagttattcctgtcaacctattaaacttattattaactacctggttttgcatactcgtaactaaggaaaccacctgcattcagctctatgcaaacattgggagttctgtttggtttgatggttaaaagttatttaacttgttttgtttcagatgaatccaaacaagcgccggaaggtagaggaaagtgactctttgtcagcagatgtactggcaaccgagaagacaaataaagaggctaaaaggggtccagaagacacaaatgctgaatcacaccatgaaattctgccaaggggcaaacgcaaggctcggaaatgcaggcgtcttgaactgaaagggaggagagtcaacgatacgaggaagagatctagctttgattcggcctctgatgatgatgataccaccttgtcggattccagtagtgacagaaatgacacccctatggataagagcctagaagatagttttgttatagctaagaatgcagattcaagttcatagaggtggttcaatgcagtgctgctggcaatacattcgaatggagttggtgaagaaagtcagatttagcgaccgcagatcggttcacttgtaagttgtaacagtagtgtaacatagttaatccttttctcgcctaactgtaatgcaggtagatttgttgaagtagcgtatcatgtaagcaatttgcaatttgtagcgtctgatgattgcgcccaaaataacaagcattatgtgtatcagcgtatctagttattttgtggcggattggttggtaacctaagcaaaaaatgtctacgaaactgcaattgaac</dnaseqindica> |
| External Link(s) |
