Difference between revisions of "Os04g0378200"

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(Created page with "{{JaponicaGene| GeneName = Os04g0378200| Description = Sterile alpha motif SAM domain containing protein| Version = NM_001059122.1 GI:115457973 GeneID:4335618| Length = 53...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os04g0378200|
 
GeneName = Os04g0378200|

Revision as of 19:51, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os04g0378200

Description

Sterile alpha motif SAM domain containing protein

Version

NM_001059122.1 GI:115457973 GeneID:4335618

Length

5384 bp

Definition

Oryza sativa Japonica Group Os04g0378200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:18489222..18494605

Sequence Coding Region

18489363..18489490,18490529..18490593,18490687..18490958,18493596..18493670,18493752..18493814
,18494283..18494327

Expression

GEO Profiles:Os04g0378200

Genome Context

<gbrowseImage1> name=NC_008397:18489222..18494605 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:18489222..18494605 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtacgcggaccagatctccaccggccggaagcgctccatccacgaccgcatcgacggcgaccagcccgccgcccgcgctggcgccggcgccggcggccggggggcccgtaacccgccgtccaagaggcaacggcaaactgatgaaaaatggaagcatgatctttaccgggaagacgatgaaccagcttcaaaatcaattgatccacgggatttgcgattgaagcttcagaagaaaagctctcagcaaagctttgctggccaaaggggttctggtgtacgtgatctacgtgagatgctttctggaacaatgcacccacagccagtcaatgcggaccctccaaaggcaaagccatcatcagagatcgtgaaagtcacaaggcgtgaaaatgcagatgtaatgcctgtacgtcaaagtaagaaagtaccaaaaccgacgtcatcgaagaagacatctcagccgaaggctgacagtccacttgatattttcctgaaatctcttggacttgagaagtactcgattaccttccaggcagaagaggttgacatggcagccctaagacacatgactgacagtgatcttaaagctttgggcattccgatgggtccccggaagaagatcatgcttgccttggaatcgagagcgtag</cdnaseq>

Protein Sequence

<aaseq>MYADQISTGRKRSIHDRIDGDQPAARAGAGAGGRGARNPPSKRQ RQTDEKWKHDLYREDDEPASKSIDPRDLRLKLQKKSSQQSFAGQRGSGVRDLREMLSG TMHPQPVNADPPKAKPSSEIVKVTRRENADVMPVRQSKKVPKPTSSKKTSQPKADSPL DIFLKSLGLEKYSITFQAEEVDMAALRHMTDSDLKALGIPMGPRKKIMLALESRA</aaseq>

Gene Sequence

<dnaseqindica>142..269#1308..1372#1466..1737#4375..4449#4531..4593#5062..5106#attcttctccttcttctccctccgcgtcgcattcgcatcacccccccgaaaccctagacccaccaccaccaccaccatccccgagctcgcggagaggcagcgagagcgagaggtagctgctagtaggcgtcgggcgaggagatgtacgcggaccagatctccaccggccggaagcgctccatccacgaccgcatcgacggcgaccagcccgccgcccgcgctggcgccggcgccggcggccggggggcccgtaacccgccgtccaagaggtcagcgcggagcagctccagtctcctcctcctcttccctccctaccgtcctctcctccgcggcatatgctctttgcatctaagtacctcgctctgttccttcgtggctggcgcgctgtgtgtagcttaggaatacgcgtagcgtagttttgatcttgtcgcgaggaatgattgtggcttttaaagcttcggtgtcctcgtttctttgttgtgagaggagctgaatatcaccgtgtttgtggttgaaattgtgctgtgcgtgcccacccttttttacttcctgattgcgtgttgacaatgatcttgttgcgggcgagcggtaccacgcatagtttgtattgataccaattaagtcggtgtaatgcgtgaatttcagttatataggcttttggtatgtttgcacttggagcttctttgtttggaagttaaaagtccaaaattttctcttaccaaaaaaggatttgtgattccacgtggtgtgtacggtagtgtcggcttacagcttacaacaggattttcctgttgttactacttatgacttatgagatgtcctaaccaagccacatcgggtctgctgtccttttttgttgcaaaaagtcttaactttgaactagttatagtaaattgtagtgcttatagaaggaactacaacttttaagtagtcgtttggtttccatggttattagtgaggtattttccagaagacagcggtgcctcccgatgttggaaagtcagcccttgatgtttgatagtttttttccctaacaaaggtgtccgaccatttgttgtgttgatgcttacatcagttctattatcgtgttccaactgatcattgtaggcaaaatttgttgaaactgagccatggtatgtttaatcctgtttataaaaggtgcatgatctttattgtcatgcttatctagaagttagtctttctttattgaatcacataacttttattgtgcacaacactaccattcctgtatgcccatttcacttggctagctaattattaaaaccgtagatccttatattctgtaggcaacggcaaactgatgaaaaatggaagcatgatctttaccgggaagacgatgaaccagcttcaagtaataaaagaaagaagtttttgatgtaccttaaataaagacaggccttttgtattcttatttaattcttatctgcctgtgcattatgttaagaatcaattgatccacgggatttgcgattgaagcttcagaagaaaagctctcagcaaagctttgctggccaaaggggttctggtgtacgtgatctacgtgagatgctttctggaacaatgcacccacagccagtcaatgcggaccctccaaaggcaaagccatcatcagagatcgtgaaagtcacaaggcgtgaaaatgcagatgtaatgcctgtacgtcaaagtaagaaagtaccaaaaccgacgtcatcgaagaagacatctcagccgaaggtaagggttatgtttgttgtaatgggtgccacatgtatatagttttccagtatttagttggatctcattctcagttgtttgcaattagcttgagagactgcttttttggtaactacttttattttgatgtccagaatgaaacttgtagtaatagttttgagaaaatttcttatttaccatataatataactccaatcccttattttccaatggaaaattgatcttccctcgaatgccactagttcattttgtcttcctttatttgccactttcgtcatcttgctgttgactgtagtctgtactgcaccactggggagcggcattattgatatgcgaaaatcttttcttcttcgattagcttcagcaaggcagctaatccctccactgcagctgtttcctcctccttgaatgcatggcgagcacttcccttctgtcaaagcacttgggtaggtgtccttgttggtggtgtcaatttagcctaacttatcaaacaaaaacattcgagttggtggtgccaatttagccaactcaacaaaaacaatcgagccatgcgcagcaatgataatttgaacggttagtacactcttgactcccatccaagtcccaaccaccatgaccaaaaaaagaaaattattagcagcttagctagaggacctatgcctagcagattaaggccctgcttgcgggagcttaagattctgagaagcagttgatgggaatctggaaaaactgggtttcctagcttctggcttctaggtcatttatctggattctacaactagattctcagaatatgcgaaaatctggactgtttgggggagcttctgacagctgcagtttctcttgttctaggagaagctgcagctgtcagaagctcccccaaacatggcctaaagcttgttgggatctggtagatccaacattgttgggacatggttctagaattactatactcaattgatgcttgatttaatcatgtcttgtagcctagactttttatccccacataatctagaaagcatggtcaaccaagcattaatctatcctccatccatccccccacaagaaacaatgggtacagatccacgatagctgaattcttcatgctggctcttggctctgagtgctctgcagaggtggaggagatggattcagctgtaacggctgacttgccaaaactgctagcctgataagtgatgtggagaagtgctgccttcgtaggttcatcttgttgcctatgaacgcactgatcttctgcagatatggacaggagatagagattgagttcacaggcaagcactatgtttgtgagggtagaaaaggagttctttttccaaagatgtttaatagtcccttgacttaagggaagacaaaaatgaactgatgggcaatggcaaatagggtaagatcgtttttcacatggcaagtaaacaattttggttagcattttttttttttagaaatgttatccctggttttattgaaagcatggttctgttgattgggttaatcttttatggcaaatagtgaattttctaacacttttggatttcttgtgctgatgtttgtttcactatgttgtgctctttggagataagagtaactccaggtcctgtcatgatcttgttgtgtaaataggtgttgaattttaatcttttatcgaggaattttgggatctgttcatttcattgtcatttaaattgccccttcaatttggaatgccttctattttctgttttaagagcgccattgccattcattatacatttctgacttctgatcctgtatataaaatgatgtgcatagaattctggccgagcccactagccactggcttactagtcactgctatttaatcataggtacttctatagttggaaacttgagttggtttggtaattgggagaaggcaaaattggttatatagcatcgaaagttaacgtttttggttttatagcaccgaaagataccggttcattttaatagcacccaaagttcaccccgtttccatttttaacactttcgtcaattctcgatcgttttccgtccgccttgattgctattgacccagccacatacgcgatatgatgtttctacccctcattgccatggactctacttgtatcgcgtgcgtggctgggtcaatagcgatcaaggcgaatggaaaacgatcgagaattgacggaagtgttaaaaatgggaacggggtaaactttgggtgctattaaagtgaaccggtatctttcggtgctataaaaccaaaaacgtgaacttttgatgctatataaccaattttgcctataaaatttcaaggaagtcatagctgataagcatgcttcacagtttgttttgcatgagggaaggcaagagtcacaggaaccatataatctgttaaagggcatcggtaggtttcagcatgagagtttttatgagggtatctgaactattttgtgccaaatttatgcctagttaaccagctatgaatgttgtatcctgttgactagatccttcacatgttgtgcaaagtatagaattaactaatcgcagctgcagtgactttgcttattttcttaactaaactttcttggtatggttcagatccaacatcattttttttttgttgggaattctttataggctgacagtccacttgatattttcctgaaatctcttggacttgagaagtactcgattaccttccaggcagaagaggtttgattatttccgtgaatgtgtaaatcattttgatgccctctttgatatttatttggttaatagttgtttgtgttgcaggttgacatggcagccctaagacacatgactgacagtgatcttaaagctttgggcattccgatggtacatgcattgcgcctgagatctttattctgttttctgattattaattcgctcgtcagttagataagttttgggggtccttgcttcatctctcatttagccatttaagaatagttgtaatcacccatcaccccaggtcttaagctaactttttgtataatcgtatgtggaatcaactatgaactagttcacttcactccatttttgtataatcgtatgtggaatcagctatgaactagttcacttcactccatataaattagaatacatgtactggtatcatttttgctgaggaactggactataacctttgactgtagtactgcatatgcatgtatattttgtttcaggatataggtggcaccaaactaatgtaagtaaagttgaacatcagcaagcctgcattctttcttatgcgcaagtgtaaatttgatttaagatggaaacttaaggtgggtgttctttcagggtccccggaagaagatcatgcttgccttggaatcgagagcgtagggagggctggcgtgtaatgtagaaaggctgggcgattaggaattgtatgctcctctgcttgcttggtaaacccaaagtgtccgcatgtcctggatacggcgcaagaacaaaagcgctgggcgtcttgtaatgcgtcttctgactagttgagcattccgcattctcagccagtttaggatgttttagaggctggatgaaggttgacaatgtaatattattagtctcctgttaatttttatctggtcggcttgcttgtcaggactcaggaccagctgatt</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0378200, RefSeq:Os04g0378200