Difference between revisions of "Os04g0397000"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os04g0397000| Description = Defender against cell death 1 (DAD-1) (Defender against apoptotic death 1 protein)| Version = NM_001059199.1 GI:11545...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os04g0397000|
 
GeneName = Os04g0397000|

Revision as of 19:52, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os04g0397000

Description

Defender against cell death 1 (DAD-1) (Defender against apoptotic death 1 protein)

Version

NM_001059199.1 GI:115458127 GeneID:4335701

Length

2613 bp

Definition

Oryza sativa Japonica Group Os04g0397000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:19619177..19621789

Sequence Coding Region

19620286..19620366,19620442..19620489,19621134..19621221,19621302..19621345,19621431..19621514

Expression

GEO Profiles:Os04g0397000

Genome Context

<gbrowseImage1> name=NC_008397:19619177..19621789 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:19619177..19621789 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccgagggccacgagcgatgcgaagcttctaattcagtccctgggcaaggcttatgctgccacaccaacaaatctcaagatcattgacctctatgtggtctttgcagtcgccactgcccttattcaggttgtttacatgggaatagtggggtcatttcctttcaactctttcctttctggcgtcctctcatgcataggaactgcagtcctcgctgtttgccttcgtattcaagttaacaaagataacaaggaattcaaggatcttcctcctgaaagggcgtttgcagatttcgttctgtgcaatctggtgctccacttggtgatcatgaacttccttggttga</cdnaseq>

Protein Sequence

<aaseq>MPRATSDAKLLIQSLGKAYAATPTNLKIIDLYVVFAVATALIQV VYMGIVGSFPFNSFLSGVLSCIGTAVLAVCLRIQVNKDNKEFKDLPPERAFADFVLCN LVLHLVIMNFLG</aaseq>

Gene Sequence

<dnaseqindica>1110..1190#1266..1313#1958..2045#2126..2169#2255..2338#ctctcttcggtatcctccacacctcgtcgccgatctcccaccccgcgcggcgccggcgcccgtccgtcctctcctctcctgcctccgccgcatcctcgcctcgcctcgccggtgaggaacccgtcgccgcacatccctctctctctctgtctctctctctctcgtctctctacctgcccggacctgtggaagattttttttcttttctctttggcgttaaacccctcctagatctggagcacttgagagttcctgctgtttcttggatccgtggaggccactactcctcctctcccgccttagcttttgtctcgtggatctgggatgggatgggggtggcttcttcacagccgagatccgtgtgccggatacgacggtgatcgaccgggacggtcagattgcatggttcttgggttcagtttctgtaaccaaatttgcgtggttctcgaaccaaagcttgtcgcggggggattcgcttcccgttcccacagagcgccaatcaaaaccgacgggatttattttaagcttttcccgattccggcttcgcccccgagttgtctcttgctcgcgtggtgttgtactacctccgcatagatgttaatgaatctaggcacacatatatgtctagattcattaacatatatatgaatgtgggtaatgttagaaagtcttataatatgaaacggaagaagtactaaatagcagtctgtttccaagacaatttgtgagtaaatttgcatttcaagtttttgcgccagtgtccggcagatcaggagctgtgtaaatttgcatcctcgcggctcttcaatccggtagctgccagcatttttcatgcgcctatacttgctgtaattctgaatgctagaggagcctcacttgttattgttatagtgttgaattctgaatgctagggcctcattatgtttttattgtagtgctgaaaaaggatctgattttgatacctagctactgaagatgtagtaaactttactggttacatgaagcacagattcagattaatcataagtaaagcaccagacctgttttaagagaatcgttggtaatcgtatttttgaactgctccatgtagaacacacaagattttgaggatgccgagggccacgagcgatgcgaagcttctaattcagtccctgggcaaggcttatgctgccacaccaacaaatctcaaggtattagttggctttttttttatctataagctgtcatcttaaactattggctaattactgatcatatttctgcagatcattgacctctatgtggtctttgcagtcgccactgcccttattcaggtaactcaatcaattaccaggacaccttgaaacatatattatctgcaaaatattttcatgctttcatgttggggatttttttctttgcaaaagcaaacatgagataaaaattaagtaggcaaccaaatgatagcttaacacgagggcggtacacagcagatgggcacgattaccctggaaatttgatgctttcctaatgctatataccgttttgtttgatggaaaacattcctatttgttggtgatagtgatatcgtatcacttattgttgacaaggatgatttgtcaacacagaaatttcttccacttttttatgcagagaaatatgttctagttcatcatctagcttacattttttttcatatatatatgcagctgttatggattactgttgtttgggttgatagacaagcacatgacctgtatttttttaatatgatgttactgtgtaatagagggtcagtcaatattcttaaagcttggtgcaattttttattaagctcctaatttactgagtgaacataagtttctgttcagttcacaagtcccttcttccatcactgttgcaaactagttggtatcagccttgttatgcttacagttccatttgcaaactattgaaatgctctcctctgacaaaacaggttgtttacatgggaatagtggggtcatttcctttcaactctttcctttctggcgtcctctcatgcataggaactgcagtcctcgctggtagggatttcttaaccccttctcaattccggttaccctttttcggttgtacgatacataactgtcaatgtttcgtgcagtttgccttcgtattcaagttaacaaagataacaaggaattcaaggtaactctactttcaccttagtctgttggggccattaattcttgagattctggcgtaacgtcgcatgccaaaacactatctgcaggatcttcctcctgaaagggcgtttgcagatttcgttctgtgcaatctggtgctccacttggtgatcatgaacttccttggttgatgtcctgcccctacaactgatcaaggttttgtagccccagtttatggtcactggtcagaacaccctgatgtttgggagtgtcatagtatgagatattcatatgatctttcacacttcaccgatgtaattcgacaatttttcgagaaactataagttctctacctgccgttcgctgcggcttatctttatatctgtgtatttagtgtttaacaatcttagaacatgtgatcctgttttcttcaagtgaccgaaggttggcaacatgctattcgacc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0397000, RefSeq:Os04g0397000