Difference between revisions of "Os04g0401700"
(Created page with "{{JaponicaGene|
GeneName = Os04g0401700|
Description = Potassium transporter 1 (OsHAK1). Splice isoform 2|
Version = NM_001059224.1 GI:115458177 GeneID:4335729|
Length = 5...") |
|||
| Line 1: | Line 1: | ||
| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os04g0401700| | GeneName = Os04g0401700| | ||
Revision as of 19:52, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os04g0401700 |
|---|---|
| Description |
Potassium transporter 1 (OsHAK1). Splice isoform 2 |
| Version |
NM_001059224.1 GI:115458177 GeneID:4335729 |
| Length |
5682 bp |
| Definition |
Oryza sativa Japonica Group Os04g0401700, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 4:19907646..19913327 |
| Sequence Coding Region |
19909216..19909585,19909680..19909928,19910265..19910315,19910422..19910682,19910842..19910894 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008397:19907646..19913327 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008397:19907646..19913327 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgtcgtcggcgctggaggtggagggctcgggctcgccgggcgtcgagccggcggcgacggcgacggcgagcaggctgaagcggcacgactcgctgttcggagacgcggagaaggtgagcggcgggaagcaccacggggggtcggcggtgagctgggcggtgacgctgcacctggcgttccagagcgtgggcatcatctacggcgacatcggcacgtcgccgctgtacgtctactccagcacgttcccggacggcatcggccaccgcgacgacctcgtcggcgtcctctccctcatcctctacaccctcatcatcatccccatgctcaagtacgtcttcatcgtcctctacgccaacgacaatggcgacggtggcacgttcgcgctctactcgctgatctcccggtacgccaagatcaggatgatcccgaaccagcaggcggaggacgccatggtgtccaactacagcatcgaggcgcccagctcgcagctgaggagggcgcagtgggtgaagcacaagctcgagagcagccgtgccgccaagatggcgctcttcttcctcaccatcctcggcacctccatggtcatgggcgacggcaccttgacccccgccatctccgtgctctctgcggtgagcgggatcagggagaaagctccaaacttgactcagacgcaagtcgtgctgatctcggtggccatcctgttcatgctcttctccgtccagcggttcggcaccgacaaggtcggctacaccttcgccccgatcatctcggtgtggttcctcctcatcgccggcatcgggctgtacaacctcgtcgtccacgagatcaccatcctcaaggccttcaatccgtggtacatcgtgcagtacttcaggaggaacggcaagaagggttgggtgtctctcggtggcgtcgtcctctgtgtcacaggcacagagggaatgtttgccgacctgggccatttcaacatcagggccgtgcagatcagcttcaactgcatcctgttcccatcggtggcgctctgctacatcgggcaggcagcgtacctgaggaaattccctgagaatgtcagtgacaccttctacaaatccatcccagggccgctgttctggccgacgttcatcgtcgcgatcctcgccgccatcatcgccagccaggccatgctctccggcgcgtttgccatcctctccaaggcgctgtccctcgggtgcttgcccagggtccgggtgatccacacctctaagaagtacgaggggcaggtgtacatccccgaggtgaacttcatgatgggtctcgccagcatcatcgtcaccatcgccttcaggaccaccaccagcatcggcaacgcctacgggatctgtgtggtgacgacgttcatggtgacgacgcacctgatgacggtggtgatgctgctgatatggaagaagcacctggtgttcatcctgctcttctactgcgtgttcgggttcacggaggtggtgtacctgtcgtcgatcctgtccaagttcgtggacggcgggtacctccccttctgcttcgccatggtgctgatgacgatgatggcgacgtggcactacgtccacgtgcggcgctactggtacgagctggaccacatcgtccccacggcggagctggcgtcgctgctggaggagaacggcggcgtgcggcgggtccccggcgtgggcctcctctacacggagctcgtccagggcatcccgccgctgttcccgcgcctcgtccgcaagatcccctcggtccacgccgtcttcgtcttcatctccatcaagcacctccccatcccgcacgtcgccgccgccgagcgcttcctgttccgccaggtcggcccccgcgcccgccgcgtcttccgctgcgtcgcccgctacggctacaccgacgccctcgaggagccccgggagttcgccgccttcctcgtcgacggcctcaagatgttcatccaggaggagtccgccttcgctcctcatcaagagatgatcgatgccgccgccgacgacgacgacgaggcggcggcgaggccgaggcggtcgacgagctcggccgtgcacagcgaggaggcgatccaggcggcgtcgtcggggaggacgacggccagcagcgtccagctccaggcgggcggcgagccgccggcggcgatggacgtggaggaggagaagcggctgatcgacagggaggtgggccgcggcgtggtgtacctgatgggcgaggccaacgtgtcggcggggcccaactcgtccatcctcaagaggatcgcggtgaactacatctacaccttcctgaggaagaacctgacagaagggcacagggcactggcgattccaaacgatcagctgctcaaggttgggatcacgtatgaaatctag</cdnaseq> |
| Protein Sequence |
<aaseq>MSSALEVEGSGSPGVEPAATATASRLKRHDSLFGDAEKVSGGKH HGGSAVSWAVTLHLAFQSVGIIYGDIGTSPLYVYSSTFPDGIGHRDDLVGVLSLILYT LIIIPMLKYVFIVLYANDNGDGGTFALYSLISRYAKIRMIPNQQAEDAMVSNYSIEAP SSQLRRAQWVKHKLESSRAAKMALFFLTILGTSMVMGDGTLTPAISVLSAVSGIREKA PNLTQTQVVLISVAILFMLFSVQRFGTDKVGYTFAPIISVWFLLIAGIGLYNLVVHEI TILKAFNPWYIVQYFRRNGKKGWVSLGGVVLCVTGTEGMFADLGHFNIRAVQISFNCI LFPSVALCYIGQAAYLRKFPENVSDTFYKSIPGPLFWPTFIVAILAAIIASQAMLSGA FAILSKALSLGCLPRVRVIHTSKKYEGQVYIPEVNFMMGLASIIVTIAFRTTTSIGNA YGICVVTTFMVTTHLMTVVMLLIWKKHLVFILLFYCVFGFTEVVYLSSILSKFVDGGY LPFCFAMVLMTMMATWHYVHVRRYWYELDHIVPTAELASLLEENGGVRRVPGVGLLYT ELVQGIPPLFPRLVRKIPSVHAVFVFISIKHLPIPHVAAAERFLFRQVGPRARRVFRC VARYGYTDALEEPREFAAFLVDGLKMFIQEESAFAPHQEMIDAAADDDDEAAARPRRS TSSAVHSEEAIQAASSGRTTASSVQLQAGGEPPAAMDVEEEKRLIDREVGRGVVYLMG EANVSAGPNSSILKRIAVNYIYTFLRKNLTEGHRALAIPNDQLLKVGITYEI</aaseq> |
| Gene Sequence |
<dnaseqindica>1571..1940#2035..2283#2620..2670#2777..3037#3197..3249#3516..3627#3739..3996#4386..5410#ccagccggcgagagagagccagccagccagccagccagacagcttcttcttcctcgtccctgtgttgctgcttctgctgctgctgccgccttgtgtatagccttgtgtatctcctttggcttcttctgggtacctgccggccggctaagctagctgatcgccggccgccggctctcgttgagctcttcttggtgccggccgcggcgttgttagtgtcgtctttgctgggtacgtaagtgctcaccctttgtattttgctctccgtcgcaaaatgattcatgagctgtagttctgctggcattttctctctctttctgtctttctctctttctcatttgatacagtgtatggcaaattgcataacaatcaaagttattggtgttgggagaggcaaatccgcaataatttataaaatccgaatcaaaccaaaagattttgcctgtgatcttatatgcaaacatatgaagaaacgtttcatatgtacaagcagtataatactttcttcatgccacggtacttgtctttctagattgtttagtacaaattaagatttgagaagtagtactctcaaatgataagtaccgtggggtaaaatttgaactccaaagaaataactattttgggacagaagaatgctaccactatgtagaaattaatggttctgacgtcatagggagtggtgtctaaggttggaagtgaagttacatccagagaagttggtttgtgatttctgtatccagtttattattatcccatttggaactgagtgaggtagggtgtaacatgacccaaggggatctgaggagtgatgtgactgctattggactaattctttttgtccatgagcaacagcaatctcagggttggtgtatgtgacttgaaggtcaaatacagagtggatattatactagtattagaacagagtatttctctgctcctttatctttttttaaaaaataggtcatgtcttttaagtagtatatatctgaggtagtaaatgcccatttggactttttgtgaagagtgagttggtccactctaattttgtaactccattattaaagattaataaaattaccattactaaaacaatcagggcttattatgcataccagtgacagttcagagcacccttgaaaatatgttgttttgacacatacacatcataatagcatagtaatacctactacttgtacaccatgagctggctctcctctaagttgttggcatcttccatatgaaccaaaatctgagtaataaatcaccatattatgcatgcatcaattgcaagcaccaagaaccaagaatcgatagcatttatgctgctgatttactaggcagcaaaggaggccaaggaaatcaatacaatcctttcttgagcattttaatcactcctctccctttgcttagcaacaaaggatcccatcttctttgtagacgtcaacaaagatgcagaggattttgcttggtttttcacaccatcgccgacctcagaatcaaagccattgaccgtgcaggctgcaggaagatcagcagcaagctaagctagtagcctccaaggtgcccggagatgtcgtcggcgctggaggtggagggctcgggctcgccgggcgtcgagccggcggcgacggcgacggcgagcaggctgaagcggcacgactcgctgttcggagacgcggagaaggtgagcggcgggaagcaccacggggggtcggcggtgagctgggcggtgacgctgcacctggcgttccagagcgtgggcatcatctacggcgacatcggcacgtcgccgctgtacgtctactccagcacgttcccggacggcatcggccaccgcgacgacctcgtcggcgtcctctccctcatcctctacaccctcatcatcatccccatgctcaagtacgtcttcatcgtcctctacgccaacgacaatggcgacggtaagaatcgatcaagaaaacctccttcttcttcctcctcctccatcatcgatcgtctcagcatctctgaattgaatctctgatgacgttgcaggtggcacgttcgcgctctactcgctgatctcccggtacgccaagatcaggatgatcccgaaccagcaggcggaggacgccatggtgtccaactacagcatcgaggcgcccagctcgcagctgaggagggcgcagtgggtgaagcacaagctcgagagcagccgtgccgccaagatggcgctcttcttcctcaccatcctcggcacctccatggtcatgggcgacggcaccttgacccccgccatctccggtaaaaaaagaaataaaatcaaacgcatcaatcgatcgattattagtcaacatttatcacattatgtcagtggtaagagttgggtttcgggcgatcttggctgtgttccgttgttggtttagcggcaatcggtcacgcttagtggtggccggttcggtgctagccttcttctggggctgtgtgttggtgctgtcggtgtgtgggtggtggtatacttttttttcctagttacgatcttccgaggttataatcttgcaattttttcctactctatctcgttaaaaaaaacatttatcacattatgtgtataccttgtgttgtgtgctttgcctgcagtgctctctgcggtgagcgggatcagggagaaagctccaaacttgactcagagtatgtgtgacagaattttatccagaatttgtcactgaatgattcagaaaatgttttgaaccaaagaaacctgacatttaaattttcttggtggtgttttttgcagcgcaagtcgtgctgatctcggtggccatcctgttcatgctcttctccgtccagcggttcggcaccgacaaggtcggctacaccttcgccccgatcatctcggtgtggttcctcctcatcgccggcatcgggctgtacaacctcgtcgtccacgagatcaccatcctcaaggccttcaatccgtggtacatcgtgcagtacttcaggaggaacggcaagaagggttgggtgtctctcggtggcgtcgtcctctgtgtcacaggtaattaattatacttaattaccttccattttctgacaaatgttacacaaatgtaactgcagatgaatccattcctaattctgttgtagcctgtagtaaatttttactgattctgactagctgtaagtaataaccttaatatgattccatctgcaacaggcacagagggaatgtttgccgacctgggccatttcaacatcagggccgtgcaggtatgtatatatggacacacacctgacacccatgctttgtctgagaaatagcagtagccagggtttgaatatcgcgcagcacggttatcgtactaaccacgtgcggtaaccttttcagtttttttaaaccctcggtttttcacggtaaccgtgatatcgctgggtagcagtaaccctcaccaaaacgcgaggaaggggaaccccttgtagtaacaacctggatgtctgaactctgaaacggctctggttttttctttctgtcgcagatcagcttcaactgcatcctgttcccatcggtggcgctctgctacatcgggcaggcagcgtacctgaggaaattccctgagaatgtcagtgacaccttctacaaatccatcccaggcaagtacagagatcgactgaattttggtagaacagagtatattcatcactgacgcttactctgctctgctaactctgtcttcttcatgtgctgctgctgctgcatcgcagggccgctgttctggccgacgttcatcgtcgcgatcctcgccgccatcatcgccagccaggccatgctctccggcgcgtttgccatcctctccaaggcgctgtccctcgggtgcttgcccagggtccgggtgatccacacctctaagaagtacgaggggcaggtgtacatccccgaggtgaacttcatgatgggtctcgccagcatcatcgtcaccatcgccttcaggaccaccaccagcatcggcaacgcctacggtaacatctctttttctcatcatcagtttaaacttttaggttgaactggttgatcgactgatatgatctattgagttgaaatatggttttcaattttgaaatttagtaaatttcgatatttttgaccgaaattatttaaaaatttgattaattttgaataaatttgaataaaattcgaccaagttcacataaatttgcaaaaaaaagagaaaatttcggatgagctatgtgcttggcggtggggggcgaaatttctgaaatttcaatccctgagttgaactggttgactaactggtttgagcttttgagttgaactggttgactgattgatatgagcttttgtgttgaactgatcggtaactgatctgaacgtttatgggtgtatatagggatctgtgtggtgacgacgttcatggtgacgacgcacctgatgacggtggtgatgctgctgatatggaagaagcacctggtgttcatcctgctcttctactgcgtgttcgggttcacggaggtggtgtacctgtcgtcgatcctgtccaagttcgtggacggcgggtacctccccttctgcttcgccatggtgctgatgacgatgatggcgacgtggcactacgtccacgtgcggcgctactggtacgagctggaccacatcgtccccacggcggagctggcgtcgctgctggaggagaacggcggcgtgcggcgggtccccggcgtgggcctcctctacacggagctcgtccagggcatcccgccgctgttcccgcgcctcgtccgcaagatcccctcggtccacgccgtcttcgtcttcatctccatcaagcacctccccatcccgcacgtcgccgccgccgagcgcttcctgttccgccaggtcggcccccgcgcccgccgcgtcttccgctgcgtcgcccgctacggctacaccgacgccctcgaggagccccgggagttcgccgccttcctcgtcgacggcctcaagatgttcatccaggaggagtccgccttcgctcctcatcaagagatgatcgatgccgccgccgacgacgacgacgaggcggcggcgaggccgaggcggtcgacgagctcggccgtgcacagcgaggaggcgatccaggcggcgtcgtcggggaggacgacggccagcagcgtccagctccaggcgggcggcgagccgccggcggcgatggacgtggaggaggagaagcggctgatcgacagggaggtgggccgcggcgtggtgtacctgatgggcgaggccaacgtgtcggcggggcccaactcgtccatcctcaagaggatcgcggtgaactacatctacaccttcctgaggaagaacctgacagaagggcacagggcactggcgattccaaacgatcagctgctcaaggttgggatcacgtatgaaatctaggcatttgatacatctgatctgatatcaaagtatacatatatatgtgggaaaaaaaatgagcctagtataaaccatgggttttgttgatgatgctgatgttggaagagagggcaaagtgccttttttgtttgttgaataagtagtttcagctgaaagtgttggcaggcagggagggtttggtttttctttcgcctctgtacagtgtggtttgtgtaaacggcgtgtgccaacttgagtagaaggtttctcactggtggtgtgttgtccatgct</dnaseqindica> |
| External Link(s) |
