Difference between revisions of "Os04g0434300"

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(Created page with "{{JaponicaGene| GeneName = Os04g0434300| Description = Protein of unknown function UPF0004 family protein| Version = NM_001059375.1 GI:115458479 GeneID:4335891| Length = 3...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os04g0434300|
 
GeneName = Os04g0434300|

Revision as of 19:53, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os04g0434300

Description

Protein of unknown function UPF0004 family protein

Version

NM_001059375.1 GI:115458479 GeneID:4335891

Length

3431 bp

Definition

Oryza sativa Japonica Group Os04g0434300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:21614012..21617442

Sequence Coding Region

21614107..21614664,21614772..21614932,21615025..21615117,21615255..21615363,21615488..21615696
,21615793..21615868,21615954..21616073,21616224..21616473,21616793..21616884
,21617153..21617191,21617284..21617442

Expression

GEO Profiles:Os04g0434300

Genome Context

<gbrowseImage1> name=NC_008397:21614012..21617442 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:21614012..21617442 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atcgaggacgtgctggggccggccgggatcgccggcggcggggcggctccggggctccgtctcccgctcgccgccgtcgccgtgaagcccaagcgtccgagatcgtccagggtcgcgcagacccggccgcagcccgaggcccggatccccgggacgcagacgatatatgtgaagacgttcgggtgctcgcataaccagagtgacagtgagtacatgtcagggcagctgtcagcgtttggatatgcgatcactgaagagcccgaaggagcggatttgtggctaattaacacatgcactgtgaaaaacccaagtcagtctgccatgacaactctcatatcgaagtgcaagagtgcaaacaagcctttggttgtggctggatgtgtaccacaaggaagccgggatctgaaagagcttgaaggtattagcgttattggagtgcaacagattgaccgcgttgttgaagttgttgaagaaaccttaaaaggccatgaggttcggttgttgagtcggaaaacactgccctcacttgatttacctaaggtaaggaagaacaaatttatcgagattcttcctattaatgttgggtgtttgggtgcttgcacatactgcaagacaaagcatgctcgtggtcatcttggaagctatactatagaaagtttggtagatcgtgtgaaaattgttgtctctgaaggtgtccgagaaatatggttgagtagtgaggatactggtgcttatggcagggatatcggtacaaatcttccaaatctattaaatggaattgctgctgagcttcctgcggacagaagcacgatgcttcgcattggcatgaccaatcctcctttcatattggagcatttgaaggagattgctagtgttttgtgccatccctgtgtttattctttcctccacgttcctgtacaatcaggaagtgatgcagttttaacggcaatgaatcgtgaatacactgtgagtgaattcaggagggtagttgacactctttgtgagcttgtccctggaatgcaaattgctacagatattatttgtggattccccggtgagactgatgaggatttctctcaaactgttaaccttgtaaaacaatatctattccctcaggttcacatatcacaattctaccccagaccaggaacacctgctgctaggatgaaaaaggttccaagcgttgaagtgaagaaaaggagccgtgaattgacctcagttttcgagtcattttcaccctaccaaggaatggaaggcaaagtagagaggatatggatcactgaaatagctactgatggtgttcatttggttggacataccaaaggatatatccaggtgcttgtcattgctcctgatagcatgttaggaacatcagcagatgtgaagatcacatctgttgggagatggtctgtgtttggtgaagtgatagaaggatccgttgtagcaaaggaaacacagaagcataatcacagtgaactgcaagaagaatacaggccaagtcaggttgaggaagccacttgctgcggcacggactcttgtggtgcctgcacatgctctgatgcagcacagcaatgcaatcccggtccagagcgatccgaaaattcgacgccccaatcctgtggtgatgctactcatcaggaagctgttcagtctaaacttgtgagaagaaatgttgaaggagcggtgaaaagtagcgaaagtgatacagcgaaacaggtaggggagattcagcgactaaatgtagcagctaggaggttcccagatgttgatacgattctgtggggtggtttggccgtgagctttgccacgacagtaaccctcattgcactgctagcttacaagatttcttccacgccctcctactag</cdnaseq>

Protein Sequence

<aaseq>IEDVLGPAGIAGGGAAPGLRLPLAAVAVKPKRPRSSRVAQTRPQ PEARIPGTQTIYVKTFGCSHNQSDSEYMSGQLSAFGYAITEEPEGADLWLINTCTVKN PSQSAMTTLISKCKSANKPLVVAGCVPQGSRDLKELEGISVIGVQQIDRVVEVVEETL KGHEVRLLSRKTLPSLDLPKVRKNKFIEILPINVGCLGACTYCKTKHARGHLGSYTIE SLVDRVKIVVSEGVREIWLSSEDTGAYGRDIGTNLPNLLNGIAAELPADRSTMLRIGM TNPPFILEHLKEIASVLCHPCVYSFLHVPVQSGSDAVLTAMNREYTVSEFRRVVDTLC ELVPGMQIATDIICGFPGETDEDFSQTVNLVKQYLFPQVHISQFYPRPGTPAARMKKV PSVEVKKRSRELTSVFESFSPYQGMEGKVERIWITEIATDGVHLVGHTKGYIQVLVIA PDSMLGTSADVKITSVGRWSVFGEVIEGSVVAKETQKHNHSELQEEYRPSQVEEATCC GTDSCGACTCSDAAQQCNPGPERSENSTPQSCGDATHQEAVQSKLVRRNVEGAVKSSE SDTAKQVGEIQRLNVAARRFPDVDTILWGGLAVSFATTVTLIALLAYKISSTPSY</aaseq>

Gene Sequence

<dnaseqindica>2779..3336#2511..2671#2326..2418#2080..2188#1747..1955#1575..1650#1370..1489#970..1219#559..650#252..290#1..159#atcgaggacgtgctggggccggccgggatcgccggcggcggggcggctccggggctccgtctcccgctcgccgccgtcgccgtgaagcccaagcgtccgagatcgtccagggtcgcgcagacccggccgcagcccgaggcccggatccccgggacgcaggtgaaaccgccgccgtagctcgagctccaatgagcgtgttgctgcgtttccacgtttaatctgatgcgcttgatggtttcgttttgttgcagacgatatatgtgaagacgttcgggtgctcgcataaccaggcaagcttcgtccacatttatttctgcagaattttggcacgctagcttacagaatactgatatgaattatgaagtgctatatgattcgttaaatgctgttacttccactagcaaatgaagaaattctggttgaagtgctgaaacaagtagtgatccactgatagtgtgtggttctagcgggcttattcattgtgctgatgctaggaagccaatggttctgctgttgttagctatgtaaaataaccagttgatcattcctgctctgcagagtgacagtgagtacatgtcagggcagctgtcagcgtttggatatgcgatcactgaagagcccgaaggagcggatttgtggctaattaacacgtatggttttagtttctttcttctcttatttgtttctttccatctattacctcctgacgttcattaaaagtacacatgagttgaatttaacctgtgatggtttcaaactggtgctgctctggatttgtgttgtggaaaactagctacgctattttttgcactagaatatgccatgagctgtgtaaacttgggataataagcataaatccaacttgcagtgccgaagagtgagatatatattgacacgtaggggcaaaccttcaaattaacttcagaggtgaagaatatattgtgaccgacacctattttgccatttcagatgcactgtgaaaaacccaagtcagtctgccatgacaactctcatatcgaagtgcaagagtgcaaacaagcctttggttgtggctggatgtgtaccacaaggaagccgggatctgaaagagcttgaaggtattagcgttattggagtgcaacagattgaccgcgttgttgaagttgttgaagaaaccttaaaaggccatgaggttcggttgttgagtcggaaaacactgccctcacttgatttacctaaggtacaactcatatttctgtacatgatgttatatgtatcaatcttttatggctagtatagtgccaatgttatgtgctattacctttttaccactgacagatgtaatatactaatatcattcctgatgactgaccacagctacaatttccaggtaaggaagaacaaatttatcgagattcttcctattaatgttgggtgtttgggtgcttgcacatactgcaagacaaagcatgctcgtggtcatcttggaagctatactatagaaagtttggtacgttcatagatgttttgtttcctgtaggaagttttgcttatttatttaaatctcaagcatgaaaattggtttgctactctaggtagatcgtgtgaaaattgttgtctctgaaggtgtccgagaaatatggttgagtagtgaggatactggtgcttatggtaataccattgtccagatctttttggattccttctgagagataagccatagaattattatggcaatttgctcctctgactttgcgaggttttcaggcagggatatcggtacaaatcttccaaatctattaaatggaattgctgctgagcttcctgcggacagaagcacgatgcttcgcattggcatgaccaatcctcctttcatattggagcatttgaaggagattgctagtgttttgtgccatccctgtgtttattctttcctccacgttcctgtacaatcaggaagtgatgcagttttaacggtatgcttgaacttacagcaacatatggatataaaacccaaatataattgggtaattatttgcttgtaacctatctgtagtgtttgcgcctggccctgacttattccacaactatacatctcaggcaatgaatcgtgaatacactgtgagtgaattcaggagggtagttgacactctttgtgagcttgtccctggaatgcaaattgctacagatattatttgtggattccccggtaaaataaatatcttggtttagctattcaaccttacttaaagtgatcatttatgaataaccttcatctttgtttattaaatcattcaaagatgtcgatagtagtttaagctaaagtataatcttgccatttttcaggtgagactgatgaggatttctctcaaactgttaaccttgtaaaacaatatctattccctcaggttcacatatcacaattctaccccagaccaggtatctttttctaacttttgttttctagaaatattcttcatcagttttcccccatgtctttgtctataatgttgtttctttgtgttctgtaggaacacctgctgctaggatgaaaaaggttccaagcgttgaagtgaagaaaaggagccgtgaattgacctcagttttcgagtcattttcaccctaccaaggaatggaaggcaaagtagagaggatatggatcactgaaatagctactgatggtgttcatttggtaagcgtgtcattattgctggcaatcttatcatcgatggtgtttgtgcgagttgccacatttatagtcacataaactttttcctgaaattatcttttgctgcacaggttggacataccaaaggatatatccaggtgcttgtcattgctcctgatagcatgttaggaacatcagcagatgtgaagatcacatctgttgggagatggtctgtgtttggtgaagtgatagaaggatccgttgtagcaaaggaaacacagaagcataatcacagtgaactgcaagaagaatacaggccaagtcaggttgaggaagccacttgctgcggcacggactcttgtggtgcctgcacatgctctgatgcagcacagcaatgcaatcccggtccagagcgatccgaaaattcgacgccccaatcctgtggtgatgctactcatcaggaagctgttcagtctaaacttgtgagaagaaatgttgaaggagcggtgaaaagtagcgaaagtgatacagcgaaacaggtaggggagattcagcgactaaatgtagcagctaggaggttcccagatgttgatacgattctgtggggtggtttggccgtgagctttgccacgacagtaaccctcattgcactgctagcttacaagatttcttccacgccctcctactagtaagtctggtgcatgtgtaactgtagttgagctgtgtgttactgctcagttttgaccatttttctgtatccatcctcgatccttctgtttgccgc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0434300, RefSeq:Os04g0434300