Difference between revisions of "Os04g0447400"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os04g0447400| Description = Similar to Glutamate decarboxylase 2 (EC 4.1.1.15) (GAD 2)| Version = NM_001059450.1 GI:115458629 GeneID:4335973| Le...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os04g0447400|
 
GeneName = Os04g0447400|

Revision as of 19:53, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os04g0447400

Description

Similar to Glutamate decarboxylase 2 (EC 4.1.1.15) (GAD 2)

Version

NM_001059450.1 GI:115458629 GeneID:4335973

Length

2355 bp

Definition

Oryza sativa Japonica Group Os04g0447400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:22712607..22714961

Sequence Coding Region

22712954..22713397,22713578..22713630,22713715..22713968,22714065..22714480,22714559..22714846

Expression

GEO Profiles:Os04g0447400

Genome Context

<gbrowseImage1> name=NC_008397:22712607..22714961 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:22712607..22714961 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgctgtcgacggcgcagacaggggagtcgatgcactcctcgacgttcgcgtcgcggtacgtgcgcacggcgctgccgaggttcaggatgccggagaagtcgatccccaaggacgcggcgtaccagatcatcaacgacgagctgatgctcgacggcaacccgcgcctgaacctggcgtccttcgtcaccacgtggatggagcccgagtgcgacaagctcatgatggccgccatcaacaagaactacgtcgacatggatgagtaccccgtcaccaccgagctccagaaccggtgcgtgaacatgatcgcgcatctgttcaacgcgccgatcggggacgacgagacggcggtcggggtgggcacggtggggtcgtcggaggccatcatgctggcggggctggcgttcaagaggaagtggcagaacaggatgaaggccgaggggaagccccacgacaagcccaacatcgtgacgggggccaacgtgcaggtgtgctgggagaagttcgcgcgctacttcgaggtggagctcaaggaggtgaagctgacccaagggtactacgtgatgaacccggagaaggccgtggagatggtcgacgagaacaccatctgcgtcgccgccatcctcggctccaccctcaacggcgagttcgaggacgtcaagatgctcaacgacctcctcaccgccaagaacgccgagacagggtggaacacgccgatccatgtggacgcggcgagcggcgggttcatcgcgccgttcatctacccggagctggagtgggacttccggctgccgctggtgaagagcatcaacgtcagcggccacaagtacgggctcgtctacgccggcgtcgggtgggtcatctggcgcaacaaggaggacctccccgatgagctcatcttccacatcaactacctcggcgccgaccagccaaccttcacgctcaacttctccaaaggatcgaaccagataattgcgcagtattaccagctcattcgtctcggattcgaggggtacaaggacatcatgcagaactgccgggacaacgcgacggtgctccgggaggggatcgagaagacgggccacttcgacgtggtgtccaaggactccggcgtgccgctggtggccttctccctcaaggactcgtcgcggtacacggtgttcgaggtggccgagagcctccgccgcttcggctggatcgtgccggcgtacaccatgcccgccgacgctgagcacgtcgccgtgatgcgcgtcgtcatccgcgaggacttcagccgcggcctcgccgagcgcctcatcaccgacctcaccaagacggtggccgatatggacgcccacgccgtcaagaaggccgccgccgagccggccaagaagaccgtgcgggagatagagaaggaggtgaccacctactggcggagtttcgtcgccaggaagaagagcagcctcgtctgctga</cdnaseq>

Protein Sequence

<aaseq>MALSTAQTGESMHSSTFASRYVRTALPRFRMPEKSIPKDAAYQI INDELMLDGNPRLNLASFVTTWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNM IAHLFNAPIGDDETAVGVGTVGSSEAIMLAGLAFKRKWQNRMKAEGKPHDKPNIVTGA NVQVCWEKFARYFEVELKEVKLTQGYYVMNPEKAVEMVDENTICVAAILGSTLNGEFE DVKMLNDLLTAKNAETGWNTPIHVDAASGGFIAPFIYPELEWDFRLPLVKSINVSGHK YGLVYAGVGWVIWRNKEDLPDELIFHINYLGADQPTFTLNFSKGSNQIIAQYYQLIRL GFEGYKDIMQNCRDNATVLREGIEKTGHFDVVSKDSGVPLVAFSLKDSSRYTVFEVAE SLRRFGWIVPAYTMPADAEHVAVMRVVIREDFSRGLAERLITDLTKTVADMDAHAVKK AAAEPAKKTVREIEKEVTTYWRSFVARKKSSLVC</aaseq>

Gene Sequence

<dnaseqindica>1565..2008#1332..1384#994..1247#482..897#116..403#cgcgtcgtcgtcccctctcctagctagcggctatcaaacccccacaccactgctcgatcgatcgtcgcagccggagtaactaaggcagagatcagatcaggcgaattaggagcatatggcgctgtcgacggcgcagacaggggagtcgatgcactcctcgacgttcgcgtcgcggtacgtgcgcacggcgctgccgaggttcaggatgccggagaagtcgatccccaaggacgcggcgtaccagatcatcaacgacgagctgatgctcgacggcaacccgcgcctgaacctggcgtccttcgtcaccacgtggatggagcccgagtgcgacaagctcatgatggccgccatcaacaagaactacgtcgacatggatgagtaccccgtcaccaccgagctccaggtaaacaaccaccacgacaacaacaaacacctctgcatctgcacaacgcatcatgtctaacacggatccgatgaacagaaccggtgcgtgaacatgatcgcgcatctgttcaacgcgccgatcggggacgacgagacggcggtcggggtgggcacggtggggtcgtcggaggccatcatgctggcggggctggcgttcaagaggaagtggcagaacaggatgaaggccgaggggaagccccacgacaagcccaacatcgtgacgggggccaacgtgcaggtgtgctgggagaagttcgcgcgctacttcgaggtggagctcaaggaggtgaagctgacccaagggtactacgtgatgaacccggagaaggccgtggagatggtcgacgagaacaccatctgcgtcgccgccatcctcggctccaccctcaacggcgagttcgaggacgtcaagatgctcaacgacctcctcaccgccaagaacgccgagacagggtaagacacctcgccgatctctgcattcactgcacgaaaatgccaaaattaactcaagaagtcaagatcattgatcgatctgagaatgcatgacaggtggaacacgccgatccatgtggacgcggcgagcggcgggttcatcgcgccgttcatctacccggagctggagtgggacttccggctgccgctggtgaagagcatcaacgtcagcggccacaagtacgggctcgtctacgccggcgtcgggtgggtcatctggcgcaacaaggaggacctccccgatgagctcatcttccacatcaactacctcggcgccgaccagccaaccttcacgctcaacttctccaaaggtgcatgcccgttttgcatacgtgattacctttggataattgcacatccagtaatctgatttttctaccctgttctgataataggatcgaaccagataattgcgcagtattaccagctcattcgtctcggattcgaggtaatataactactctttttttgcaactacacggaatcatgtgtgttgattgcatcagcgagaaaccctggatgtttggattcaagttcatgcattccgaatggttgcatcgtttgttgggatcctgtcggctgtacctatttgatcatgcgaaaccgaatgttgctgttcgtgatgcaggggtacaaggacatcatgcagaactgccgggacaacgcgacggtgctccgggaggggatcgagaagacgggccacttcgacgtggtgtccaaggactccggcgtgccgctggtggccttctccctcaaggactcgtcgcggtacacggtgttcgaggtggccgagagcctccgccgcttcggctggatcgtgccggcgtacaccatgcccgccgacgctgagcacgtcgccgtgatgcgcgtcgtcatccgcgaggacttcagccgcggcctcgccgagcgcctcatcaccgacctcaccaagacggtggccgatatggacgcccacgccgtcaagaaggccgccgccgagccggccaagaagaccgtgcgggagatagagaaggaggtgaccacctactggcggagtttcgtcgccaggaagaagagcagcctcgtctgctgatcatcgactcctgcactcgcgcgtacataaagtgcaggaacgaataattcttgacccgtcttgcattgagttcttcgtttgctgctgcttcttttctttttttttttccttttcacccgctgaattttgagttcagtttcaaattcgcttcgatagatttgtgtatgtcacaccgatttgtggcattcttgcagacaagttaccaatatgaaatgcgtataggcatgtacacgcagagacgtgtcaggcagaacagaagtgagatgcaccgatctgtaccggccatggcatggaattggtttgtcatgggctatagttggttgacagaataagttcattttgtgacc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0447400, RefSeq:Os04g0447400