Difference between revisions of "Os04g0489600"
(Created page with "{{JaponicaGene|
GeneName = Os04g0489600|
Description = Basic helix-loop-helix dimerisation region bHLH domain containing protein|
Version = NM_001059693.1 GI:115459115 Gene...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os04g0489600| | GeneName = Os04g0489600| | ||
Revision as of 19:55, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os04g0489600 |
|---|---|
| Description |
Basic helix-loop-helix dimerisation region bHLH domain containing protein |
| Version |
NM_001059693.1 GI:115459115 GeneID:4336235 |
| Length |
7743 bp |
| Definition |
Oryza sativa Japonica Group Os04g0489600, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 4:24859733..24867475 |
| Sequence Coding Region |
24859918..24860311,24864997..24865382,24865514..24865636,24866256..24866321,24866464..24866532 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008397:24859733..24867475 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008397:24859733..24867475 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgaacccggcgccgtcgagggcgccgcagcggcagcagcgcggaggggagatgtcggcgcgctacggcggcgggctgcagttcttcgctgacgccccgccggcgggggtggaggggggcgccgcgaccgcgcggacgttcttcccggtgccgggcgggggaggggagcagcagccgccggagcgcgcgatgaggcagcagcactacggcggcggcgggagtggtgcggccgagatctcgctggggcacggccacggccacggcggcaagcaccatttccatcagttcggcgtcgaggcgaaggacggtggcggcggcggcgaccagtcggggtttctgacgcggcacaacagctcgcctcccgggttcttctcgagccccgtcatggacaacggtttctcatcgagtgctagaccagcaggatcatcactcggtgaggttcgccatggcgccatgagcagcagcagcaacaacaacaagaagatgaaggccccactgagcttcgctagcagcaggcagggctccggcggcctctcccagatatccgaggacggcatcccggacctcactgacagcatccatggcgccgctcatcatcatgggcgctccgaggagaacgtctccacccacgaccacgtcgtccgctccttctcctccggtgggttctcgatcgggtcatgggaggactccaactccatcgtgttctccacgtcgacgggcaaatcaggagcgcacggcaacgacgacatcatcgccacccttagcaactacgaatctcagcttgttgcgcccagggagatggctggcgtagagaaatacctgcagatgcagcacgaccaggtgccattcagagtacgggccaagcgtggatgcgcgacgcacccacggagcatcgcagagagggagagaagaacgaggatcagcgagaagctcaggaagttgcaggccctggtgcccaacatggacaagcaaacgagtacttcagacatgctggacttagcagttgatcacatcaagggactgcagagccagctgcagactctgaaggaagacaaggagaaatgcacctgcagctgcaagcaagcatcaaggaacagaccagccgactaa</cdnaseq> |
| Protein Sequence |
<aaseq>MNPAPSRAPQRQQRGGEMSARYGGGLQFFADAPPAGVEGGAATA RTFFPVPGGGGEQQPPERAMRQQHYGGGGSGAAEISLGHGHGHGGKHHFHQFGVEAKD GGGGGDQSGFLTRHNSSPPGFFSSPVMDNGFSSSARPAGSSLGEVRHGAMSSSSNNNK KMKAPLSFASSRQGSGGLSQISEDGIPDLTDSIHGAAHHHGRSEENVSTHDHVVRSFS SGGFSIGSWEDSNSIVFSTSTGKSGAHGNDDIIATLSNYESQLVAPREMAGVEKYLQM QHDQVPFRVRAKRGCATHPRSIAERERRTRISEKLRKLQALVPNMDKQTSTSDMLDLA VDHIKGLQSQLQTLKEDKEKCTCSCKQASRNRPAD</aaseq> |
| Gene Sequence |
<dnaseqindica>186..579#5265..5650#5782..5904#6524..6589#6732..6800#7211..7282#agtcgctcgctcgctcgctggctgactgcgcccgcgcccgctttgctgcgctcccccggcacgcgacgacgaaaagaccggcctcaaaagcgacaccacgcagcagacgcagcgcccccgcgcggagaagctagctaggtactcctgtctggttagctagctagctatagctagaagcctagcacatgaacccggcgccgtcgagggcgccgcagcggcagcagcgcggaggggagatgtcggcgcgctacggcggcgggctgcagttcttcgctgacgccccgccggcgggggtggaggggggcgccgcgaccgcgcggacgttcttcccggtgccgggcgggggaggggagcagcagccgccggagcgcgcgatgaggcagcagcactacggcggcggcgggagtggtgcggccgagatctcgctggggcacggccacggccacggcggcaagcaccatttccatcagttcggcgtcgaggcgaaggacggtggcggcggcggcgaccagtcggggtttctgacgcggcacaacagctcgcctcccgggttcttctcgagccccgtcatggacaacggttactgcactctctgctcacttaattacgtgtaccttcgatttgccgtcttgattcgtctcttccattactatcgagtttggaatgttccaattaaccaccgttcttctttctcttgactcattggagtattccaatttatttctctgtctttatttcttttttttcttcttttactgcgattttttttcttatggtgcgatgtttagtcaagtgtgatcttggttattttttctctcattttcttgatatttgagtgcttttgatgaatgtttctgggtctactgcacaggttacacgtacatcagcagctgtgcaatgtagtcatccaatacatttgcaacagcgccttcatttttctgttatatttacgccgcatgcatgttcattagcagccgcccaccgattagtgcaatattctttcgggggcagcaatattttactccattttatgttgaaaaaaaaggctgtatgatcgttttagtaagggtttagactacaaaacggatgttcgatgctaccaggtttgataaattaaaataaagttcactctatatatctgaaggtagaccggcgccataccctttttatttgccgcaggattttttttcgaggggaaatttgccgcaggcttaatttcgttactgtcgctctgtcgttcatctttgtgttcgttttcaaaataaactcaagtttaccatgaataaaatacttatttgaaaccccaagttccttttcggatcaaaataaattacctacctatgcaaagtgaaatatgatcgataaatcttttgtttgtgatgggttacttttgcaacaaaatcacaatatcgtaagcaaattacttcagcaaaaaatatgcaaatactatttttgtgtgtccggtctacaaacacacatgaagatatattgatatataatcaaagtttgtatataagtataggtgactttgtgtaccctaagaatttcactcattgaccaatattgagagtatagtctcctagctaatctgattctgcaatctgctgatttcaccaactatatccaaacttttgtcttcggtttgtttttgtttatatacgtgatatcttatgggttgctttcaaaccgggtggcttggaataattggatggaaaactacgggctgcacagttacggtggttttctggtgggggcaatgagaaatgggtgggtccttaggattgtataaccacatatgtacacatatgtacgcccacatgcttcttgcacatatttatttattccgaaatatttactaaactatctattttaacatgctattaatatttatttgttttgctgacagcctaacatcactaccatggacctagctactttcctcctctttggttttcaagccgttatacattgcctttacgcgtgtcctatcagccatccactagtttcagaactaacaggataagttgtccttatcttattagactctatttggtgtacgtgtagcatctacccttcactagatataaaactaataaattatacgtacaacttgtttataatgtccattatgcacccttcatatataaaactagtaaaactatgcgtacaccttgtttgaattgtgtacatctatcctatggggaaaagtgcgaagaccttttctaaatattattttttattattgtcctattgaacttcttgtccacttgtaacacatttggtctacattttaagagactatttcttctactcacctatcatttttatagcttctttcgtaataaacagcggcacttgaactaataggataacaacgtacagcctcatgtgtgaacatatacaacagtgtgttgaattatatgcaattcaagttaccttaatttccttatccttgaaaaagaacaaagtcgctttttcttagattttcccatgtctcaagttatgtctggccaagacgacggtaagctataacccgaagaaggttaatcgaattggtgccccacacgctgctatacggctgccgtgtgatgtatagactgattaaccaaggggctggacgacggttcttcgcttgatggtgtattatcgaacgcgcgtaattaagctagcttagctaggttaggcccgctaaccttacacatgaaattaagttctgtcatatcccgtctaggttcagttgatcgatctctctcgcgtgcagacatcagcgaaccaaagtagaggtgatgtcacctcctatatatacatgcgagcaccagacgacgacgatcgaggaataattcattctgggttcattctcactcgctggttgcctggctggggtgagtggaagagtgttgcacgcggcgccaaagccatcaacagtttgacatatctgtccatcgccgtgagatcgatcgtaaacggtaaacctggtctactactatactatacgatgggatccggtggcaacttggtagggatggaggtagaacaaaatagagaagggtatcactcgcttggtttactctactttatatcaagtttagactgatatgtatgcttgagtttaaattgagggggtgcacatacggtgaaaattgataaattatagatatttttttttaaccgggttcctagctaggcatccctctcctagttacctagctccacccctgcaacttggcatgttctatttaagaaactgcattttgataaaaaaaaatgtttcttgcacacttgcgaattgggagtactttgtgtgacaatggggggatatatatatatcgatcgtagattaaactacttgtgtgtgatcaccctccaccgtgcatgcgatgttcgacggcagtacgatttagctagaatgtctagcatgacacattagaatgtctttgatgaacatcacgcatgtgcaagttgattaattgcatacactataatattatattaatatggcacaatacatattacacttagaaagaactttcaattttcgtcctaatttttgccacacataactgaaaacaacaatttgcagtggaaaacgcaatgttttaacaaagacccaatcatatttctaatactattaacatcaaattgtgattatatatatatgattccgtggaaagaaaaatccataaaaaaataaaagaactgaacacaagcccagctagcaccttgaatttcaaaactaggcatgtagcctcttttactttgcaatactccatttgcataatctttggagtgatttgccaatcttcgatcgttgaatcgactatacatgacacacatgtaggcattgtgttggttcttagttgtctcaggagaaaaagggtacaatggagagagataatggaaaatatcttgtactatgtcactcagagcaagtataatagtgagctataagcttactatatacttaggtggaggaaagaggaagtaaaaaatcaagggtgttggctctcatgcaagagctaacttatcacaagctccaagataaatacattaaatatataagtgagagatagagagaagaagaaaattatagccaaacttatagttaatctactatatatattagttttaagataagctaatagtagaaagtgggctctactattattcttgctctcgggcatagccatcttaaagggttatgtagataatattgcaaagctcagagggccaggcgacaactggtttaaatgatcacacaatgcttacttcctaggaactatcaagttgggctcctttacgatgcaagttcttcatttgattggtaattaataacagatggttggcttcggatcggctagtctcttccacagccgagtgcatgccatctttgagatcaaagtgatgaaactatacaacacatacaattgtctctcgtgtcttttgcaagctgtgtgtacttcccttctcttggagatggggttgcgctggggttgcatctcagccaacgacagttcatttttcaggttggtggtgtgtaaagccatcaatgaagtttcaaaagagatgcgcaaaggactaaactcattgattattctagtagcataggagatttggaagaaccgtaacaattgtattttcaaagcttctctaaatgttttggtggtagcacgtgcagtggcaaatgacagtatttgtggtgtttagccggaaactcgagcgctctgtaagctttctttgtatgtaggtcaattaatttggacgactaatgatggctttctgggtaacgagtttatgtgagtgtggccattttaatttgttccttatgtttgtaattatttttcccttttttttatttttctcaatgaaacgaagcacaaacctcctttacttttgagaaagaaaagcttgaagtgttaaacatacttttttttttgcgggagtagtatatagagggtttttttttccattgtggaataagttgctgttgtgtttttcttacaacagtatcatcgtctacttcgaaccgtaagtgctactctctgatgaaccttgtgaaacggatttaaaacacatgcatgcatggaacaagttcatttcccagatgtgcggaccactgctgcatgtttagcatttccaaaaaaaaaaaaaaatctgcttagtcaccaactcacgatttatacatcttcttataacaatatttgtggatatagagatcggattaatgaaacatccattatctaaaaaacatcttcttatggcaataggtttctcatcgagtgctagaccagcaggatcatcactcggtgaggttcgccatggcgccatgagcagcagcagcaacaacaacaagaagatgaaggccccactgagcttcgctagcagcaggcagggctccggcggcctctcccagatatccgaggacggcatcccggacctcactgacagcatccatggcgccgctcatcatcatgggcgctccgaggagaacgtctccacccacgaccacgtcgtccgctccttctcctccggtgggttctcgatcgggtcatgggaggactccaactccatcgtgttctccacgtcgacgggcaaatcaggagcgcacggcaacgacgacatcatcgccacccttagcaactacgaatctcaggtgtatatatatatgcgttttatctttatttttcatttttcgtatttatagtttgatttattagtgtgtgtgtgtacaatgtgagggatgatttcatgtctaatttgtatatacatgcatctgcgatgcagcttgttgcgcccagggagatggctggcgtagagaaatacctgcagatgcagcacgaccaggtgccattcagagtacgggccaagcgtggatgcgcgacgcacccacggagcatcgcagagagggtatgtatagacgacattttcccttgctaattctacgccccatcatagtaccaactttttatgtacgtacgtagcgggtcgaactatatactgtaatgtcaactagcatggaagcgtatcctagatacatagacctttaacgtgtatagtatgcaccgtacatcaaattaacaaatatcataaaaaaattagaaaaaaaatcaatatacatgtatttttagtattatatttacacataaagtcatgtcttcaaattcattacatagatagagcaacaaaaatgataaaattctgatatacttattgtcttaaaactataaaaaaattgttacacctatgatataacaaatttgaggttaagattttacacaaaggtgtagcatttttgaaattataatatgtattttttaaagaattttttgtgatatttgtttgttggtgtgtatagaatttgcatgcgaaacttgtgtgcacatgatatgttaccaaataagaatattgataacctttcaagatgttcttcatatgcatgcatctagccagtagcattcttgttgttcctccttggatcgtgcatgccagattaatcttcaggcatatgatcgatcgatgatgacaggagagaagaacgaggatcagcgagaagctcaggaagttgcaggccctggtgcccaacatggacaaggtgtgtgccatacgtgtgttcttttcatgtatataccagtccttgtctgaactttttcgtcagacaacaatcttcaggttattgagttggagttcaattgatgatctttctaatttgttcttcttacaaattaatgtggcagcaaacgagtacttcagacatgctggacttagcagttgatcacatcaagggactgcagagccagctgcaggtataatgacgtatgcgtgttactaatttgcatgttcagaatggcaaaactgaattgaagccactgctgcctaaagaagcctgataggtcgatgtaccagtccagttacaaagacccccgttagcatcagaatatatatagctagatggaataccaatatattgcactgtaaaacagcagctcagtatgagtaatcaagtatccctccatttcaaaataaatcaacttctattacaaacatagacatagctaaaagttgatttattttgggacggatatgagggagtaacatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatataaaagcacaacgcaacccggaaacaacactgagtttttccctgtgtgcagactctgaaggaagacaaggagaaatgcacctgcagctgcaagcaagcatcaaggaacagaccagccgactaaaatgggatgtgaagcaaattgcagtgctggctagtttgatgacatttctccttggtcctcaaaacatgtttgcctggcgacaggaaattaaaggtatagcaggcagcatatagcgtgacaagagcaaagtaatggaggtcatcagtctcttccaaacgaaaggtcgaagtcgtctgatcaaacctttaccagtgaatcgatcagtccagtcttttttcttttgtcagtgtgaccaaccccttttgttgagctgtaaaattaattgaaactagactagaattgttccttcctttaacaaggagctctgctgctctggatgttaggcttctagctgtcctgttgctgtggtaaatagtgattggttcacccagcggttagcaaataatctggttgctggtttcagggtattctccggccaacattagacaagattcagtgatgtgttatgattcatacagatc</dnaseqindica> 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