Difference between revisions of "Os04g0512900"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os04g0512900| Description = Disease resistance protein family protein| Version = NM_001059835.1 GI:115459399 GeneID:4336386| Length = 3444 bp| ...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os04g0512900|
 
GeneName = Os04g0512900|

Revision as of 19:56, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os04g0512900

Description

Disease resistance protein family protein

Version

NM_001059835.1 GI:115459399 GeneID:4336386

Length

3444 bp

Definition

Oryza sativa Japonica Group Os04g0512900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:26031914..26035357

Sequence Coding Region

26031914..26032662,26033803..26035307

Expression

GEO Profiles:Os04g0512900

Genome Context

<gbrowseImage1> name=NC_008397:26031914..26035357 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:26031914..26035357 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgcgctgcggcggcgaaaggatggtggacgagctgcgcgacgtgctggacgacttcgcgttccgggccaagcggctggccgcgccgctgctgcagccgttcggccgcgcctccgaggcggtggcgcttgacggcgcggagatcgacgggctcaggcgcatccgcgcggcgctccgggccgccgaggagcgcgtggtcaccgatgacttcgtcaggctgtggctgcgggagctggaggacctggagcgcatggccgaggacgtgctcgaggagctcgagttcgaggcgctccgcgcgtcccgcctcgagcggttcaagctccagctcctccggtccagcgccggcaagcggaagcgcgagctcagctcgctcttctcctcctccccggatcgcctcaaccgcaagattgggaagatcatggagcgctacaacgatctcgccagggaccgggacgcgctgcggctgcgaagcagtgatgaggagaggcgacgtgagccgagcccactgacgccgaccagctgtttgacgaaatgctcccttcatggaagagagcgggacaagaagcaggtcattaagctgctcctatctgatgaatataactgccagggtgtctactctgttgtgcctatagttggcgctgctggtgttgggaagactagtctggttcaacacatctacaatgatgaggccttgagatccaagtttgacatgaaaatgtgggtctgggtgtgccaagagtttgatgtattgaagctcacaaggaagctcgctgaagaagcaacggagtccccttgcggcttcgctgagatgaatcaactacatcgaatcattgctaaacggctggagggaaagcgattcttgcttgttcttgatgatgtatgggatgagagtctactccgctggacaagcttgctggttcctctaaaatctgctgcacctggtagtagaattgtagtgacgactagaagtgctaaagttgctcgaatgatggcattcaagatacaccaactggggtacctcactgatactacctgctggtctgtgtgccgaaatgctgccttgcaagaccgtgatcctagtattattgatgacggcttgatttctataggtaaatctgttgcagccaagtgcaaaggcttgccattggctgcaaatgcagcaggaagtgttctatccattgcaattgataggaagcactgggagactgttgagcaaagtgacttgtgggctaacaatgaagtgattgatcatacccttcctgctcttctagtgagctacaatagcttacagaagcctttgaaacattgtttctcgtattgctcgctgtttccgaaggagtatgtgtttagaaaagacaagctggtcaggctatggttggcacaaggctttgctgcagcagatggagaaagcgatgctgaagatattgcttgcaggtactttcataacctcgtggagaggttctttcttcagcaatctccatcttatgaccataacgagcaaaggtatgtcatgcatgatctctaccatgagcttgctgagtacgtagcagccgatgagtactctagaatagagagatttacattgagcaacgtaaatggagaagctcgccatctatccttgactccaagcgagactcattctcatgaaataggagaatttcatgcatccaataacaaatatatgaatgaatcccaataccctggcctgcgaactttgctggttgtccagagaaccaaacatgacgatggaagaaaaacttcgagcatacaaaaaccaagtgttctgttcaaagcttttgtatgtttaagggctctggatttgagtaatactgacatggagggcctgccaaactctattggggaactgatacaccttaggtacctcagtcttgagaacaccaaaatcaagtgcctgccagagtcaataagttctctattcaagttgcacacgatgaacctcaagtgttgcaactatcttagtgagctgccacaagggataaaattccttgctaacttaaggcatcttgaactaccacgcatagataactggaatgtgtacatgccatgtggaatttctgaattaactaatctccaaacaatgcacacgatcaagttcacaagtgattcaggaagttgtgggattgctgacttggttaacttggacaatcttagaggtgagctgtgcatatcaggcatagagaacgtaagcaaagaacaaattgctacagaagctatcatgaagaacaaaggtg</cdnaseq>

Protein Sequence

<aaseq>MARCGGERMVDELRDVLDDFAFRAKRLAAPLLQPFGRASEAVAL DGAEIDGLRRIRAALRAAEERVVTDDFVRLWLRELEDLERMAEDVLEELEFEALRASR LERFKLQLLRSSAGKRKRELSSLFSSSPDRLNRKIGKIMERYNDLARDRDALRLRSSD EERRREPSPLTPTSCLTKCSLHGRERDKKQVIKLLLSDEYNCQGVYSVVPIVGAAGVG KTSLVQHIYNDEALRSKFDMKMWVWVCQEFDVLKLTRKLAEEATESPCGFAEMNQLHR IIAKRLEGKRFLLVLDDVWDESLLRWTSLLVPLKSAAPGSRIVVTTRSAKVARMMAFK IHQLGYLTDTTCWSVCRNAALQDRDPSIIDDGLISIGKSVAAKCKGLPLAANAAGSVL SIAIDRKHWETVEQSDLWANNEVIDHTLPALLVSYNSLQKPLKHCFSYCSLFPKEYVF RKDKLVRLWLAQGFAAADGESDAEDIACRYFHNLVERFFLQQSPSYDHNEQRYVMHDL YHELAEYVAADEYSRIERFTLSNVNGEARHLSLTPSETHSHEIGEFHASNNKYMNESQ YPGLRTLLVVQRTKHDDGRKTSSIQKPSVLFKAFVCLRALDLSNTDMEGLPNSIGELI HLRYLSLENTKIKCLPESISSLFKLHTMNLKCCNYLSELPQGIKFLANLRHLELPRID NWNVYMPCGISELTNLQTMHTIKFTSDSGSCGIADLVNLDNLRGELCISGIENVSKEQ IATEAIMKNKG</aaseq>

Gene Sequence

<dnaseqindica>2696..3444#51..1555#ctcgattagaattgccagagtaatcggagctccggttccgatccctgtccatggcgcgctgcggcggcgaaaggatggtggacgagctgcgcgacgtgctggacgacttcgcgttccgggccaagcggctggccgcgccgctgctgcagccgttcggccgcgcctccgaggcggtggcgcttgacggcgcggagatcgacgggctcaggcgcatccgcgcggcgctccgggccgccgaggagcgcgtggtcaccgatgacttcgtcaggctgtggctgcgggagctggaggacctggagcgcatggccgaggacgtgctcgaggagctcgagttcgaggcgctccgcgcgtcccgcctcgagcggttcaagctccagctcctccggtccagcgccggcaagcggaagcgcgagctcagctcgctcttctcctcctccccggatcgcctcaaccgcaagattgggaagatcatggagcgctacaacgatctcgccagggaccgggacgcgctgcggctgcgaagcagtgatgaggagaggcgacgtgagccgagcccactgacgccgaccagctgtttgacgaaatgctcccttcatggaagagagcgggacaagaagcaggtcattaagctgctcctatctgatgaatataactgccagggtgtctactctgttgtgcctatagttggcgctgctggtgttgggaagactagtctggttcaacacatctacaatgatgaggccttgagatccaagtttgacatgaaaatgtgggtctgggtgtgccaagagtttgatgtattgaagctcacaaggaagctcgctgaagaagcaacggagtccccttgcggcttcgctgagatgaatcaactacatcgaatcattgctaaacggctggagggaaagcgattcttgcttgttcttgatgatgtatgggatgagagtctactccgctggacaagcttgctggttcctctaaaatctgctgcacctggtagtagaattgtagtgacgactagaagtgctaaagttgctcgaatgatggcattcaagatacaccaactggggtacctcactgatactacctgctggtctgtgtgccgaaatgctgccttgcaagaccgtgatcctagtattattgatgacggcttgatttctataggtaaatctgttgcagccaagtgcaaaggcttgccattggctgcaaatgcagcaggaagtgttctatccattgcaattgataggaagcactgggagactgttgagcaaagtgacttgtgggctaacaatgaagtgattgatcatacccttcctgctcttctagtgagctacaatagcttacagaagcctttgaaacattgtttctcgtattgctcgctgtttccgaaggagtatgtgtttagaaaagacaagctggtcaggctatggttggcacaaggctttgctgcagcagatggagaaagcgatgctgaagatattgcttgcaggtactttcataacctcgtggagaggttctttcttcagcaatctccatcttatgaccataacgagcaaaggtaatgtcacttattttccaactccaaaaaaccatgaactattaattatgtcacagggatgtgcaattatgcatgagtgaccatcctttggttgattgttgaaggaaagttccacaagaaaatattactgcattgttattttacctttatgctcccaaggataaatatgcaattattcatggcatgcacaaaaattgaactggcatgcaaattaaactcaatgttagcgcactccattttatgtaccattcaaatactcaaacatcactagctacaccacataaatgtctgtactgcttacatgttattttgcaatctaaaatagaaatttggcactgaattcgacatggtgacttggtgaatgtcaaaataatgctgctaaatatattttaattttaatatgggaagttaaaagtaaagcatggaagacttggtttacaaatctaacttgaaatgtttcagtatgcatgctttatgcagaacaataatactagagacaacaagaacttctgaagtaaaaaattgtaattctgcatatgcacaaccaaacttgatgaatggatatagaattggtgcagatgtgccgtgttaccaaagatattcaggaaatacagcatgttaagattgctataaatttattatttttaataaaaacttatgtttcatttttctgtggtgcttttattagtattctccttgtaataggtgagtctatacatttttttcttgaaatttccgaattgaatgctttttatggacaatgtcacataagtgccactattatgtagtggagtttaaaccttaatattgctgctattatttccttagtggctgaagagtagcactgcaagagctcacactttgatagccttccatattttccatgtcttaatcccagtggtttgatgaatatttgtattgatggctattgattattagatgaaaagctcctatggttataactagatggatggccttaaacaactactaatgttggtcatataaacattcatttctggttaaaccttttcaggcttcatgttagttaggtataactcattttaatcatattcttgcttcatgggtttatgctgttttaagatccttcagaaacttccataacactgattatactaacaggtatgtcatgcatgatctctaccatgagcttgctgagtacgtagcagccgatgagtactctagaatagagagatttacattgagcaacgtaaatggagaagctcgccatctatccttgactccaagcgagactcattctcatgaaataggagaatttcatgcatccaataacaaatatatgaatgaatcccaataccctggcctgcgaactttgctggttgtccagagaaccaaacatgacgatggaagaaaaacttcgagcatacaaaaaccaagtgttctgttcaaagcttttgtatgtttaagggctctggatttgagtaatactgacatggagggcctgccaaactctattggggaactgatacaccttaggtacctcagtcttgagaacaccaaaatcaagtgcctgccagagtcaataagttctctattcaagttgcacacgatgaacctcaagtgttgcaactatcttagtgagctgccacaagggataaaattccttgctaacttaaggcatcttgaactaccacgcatagataactggaatgtgtacatgccatgtggaatttctgaattaactaatctccaaacaatgcacacgatcaagttcacaagtgattcaggaagttgtgggattgctgacttggttaacttggacaatcttagaggtgagctgtgcatatcaggcatagagaacgtaagcaaagaacaaattgctacagaagctatcatgaagaacaaaggtg</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0512900, RefSeq:Os04g0512900