Difference between revisions of "Os04g0513400"

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(Created page with "{{JaponicaGene| GeneName = Os04g0513400| Description = Similar to Beta-glucosidase| Version = NM_001059838.1 GI:115459405 GeneID:4336389| Length = 8719 bp| Definition = O...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os04g0513400|
 
GeneName = Os04g0513400|

Revision as of 19:56, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os04g0513400

Description

Similar to Beta-glucosidase

Version

NM_001059838.1 GI:115459405 GeneID:4336389

Length

8719 bp

Definition

Oryza sativa Japonica Group Os04g0513400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:26056878..26065596

Sequence Coding Region

26056941..26057081,26057203..26057269,26060102..26060163,26061282..26061357,26061464..26061538
,26062877..26062964,26063064..26063297,26063567..26063586,26064268..26064311

Expression

GEO Profiles:Os04g0513400

Genome Context

<gbrowseImage1> name=NC_008397:26056878..26065596 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:26056878..26065596 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgtggcggcggcgacgcgcattgcggtggtggtggtggtcttggcgctggcggttctcgcgccggccgcgcgcgggctccgccgagacgacttcccgccggggttcctcttcggcgccgcgacgtccgcttaccagattgagggcgcatacttggacgacaacaaggggctcaacaattgggatgtcttcacccacacgcaggctggacgaatctcagatggacgcaatggggacgtagcggacgaccactaccatcggtacacggaagatgtggatatcctgcataacttgggtgtcaattcctacagattctcgatttcgtgggcgagaattctaccaagaggccggcttggaggagttaattcagcaggaattgccttctacaaccgtctgatcaacgcactccttcagaaaggcatacaaccattcgtgactctgaatcatttcgacattccgcacgaactggagacccggtacggcggctggttaggcgctgcaatccgggaggagtttgagtactactcggacgtctgcttcaatgcgttcggcgatcgggtcaggttctggacgacgttcaacgagccgaacctgtccaccaggcaccagtacattctgggagagttccctccgaaccactgctccccgccgttcggcaactgcagcagtggcgactcgcgccgggagccgtacgccgcggcgcacaacatcctgctctcccacgccgccgccgtccacaactggccttcgaggtggattggtttttggatccaatattctttggtgattaccctagagaaatga</cdnaseq>

Protein Sequence

<aaseq>MAVAAATRIAVVVVVLALAVLAPAARGLRRDDFPPGFLFGAATS AYQIEGAYLDDNKGLNNWDVFTHTQAGRISDGRNGDVADDHYHRYTEDVDILHNLGVN SYRFSISWARILPRGRLGGVNSAGIAFYNRLINALLQKGIQPFVTLNHFDIPHELETR YGGWLGAAIREEFEYYSDVCFNAFGDRVRFWTTFNEPNLSTRHQYILGEFPPNHCSPP FGNCSSGDSRREPYAAAHNILLSHAAAVHNWPSRWIGFWIQYSLVITLEK</aaseq>

Gene Sequence

<dnaseqindica>64..204#326..392#3225..3286#4405..4480#4587..4661#6000..6087#6187..6420#6690..6709#7391..7434#agtgctcgagctaaacgagtgagagaacgagtagtacgtgctgtagtgggtggatcggtcgagatggccgtggcggcggcgacgcgcattgcggtggtggtggtggtcttggcgctggcggttctcgcgccggccgcgcgcgggctccgccgagacgacttcccgccggggttcctcttcggcgccgcgacgtccgcttaccaggtgggttggtcgatcatgggctgctcacatggagggtgggtgtggagcttgcctttccttctcgatcgttcattcgttcctggctgtgaatgacatgtattccgttttctgctgctgccagattgagggcgcatacttggacgacaacaaggggctcaacaattgggatgtcttcacccacacgcagggtaagaggtcaccaacagattaacaataatcagttcctaaaactatatatttttctcctaaactgaatgcaagaaattgaatataggaagtgagaaaactaatccttgatagcctaaaattgatttcctataataaaaaatggtccctccctttaactactagcagagaatattacattttctgctcctcccctatacgtgcgccggatggccagctcctctttcatctcgctcgagagagcgattgggaaaaaaatcgctctcttaaagtggggaagaagatatctagagttaggaacctgtattattgttgagagacaggttaaggattctgttggatatgattttttgccaaaattttctaaatctaaggatagaaaatagaataagaaaatgttgcgttctttaggagtgggttgagtaaaagaaaaacatatttctcacgtgccaaagtgcttaaactgttttttttataaaaattatagacaagttgccttaattgcttttaaaaattatatttattattttttaagtttagaataattaatttaattaactatatactaataacttttttttctcatgccaaccacatccctagggtcgtctatcaccggctacactgaactcagattctccttctcccttcttaattcttcttctccaatcaggagtactagtacttttcaaaagagagcattttttttgaaagaatataaactgtggttagtgcttccattcgagatgtatgcccgtatcatgtgtcagtttcactgtgtccaaaagttggtctgcatgtcactgccaacatatgcaaggaggcatcttttcctctcggtagccttggaataacgaatcatgcgtaattcttcacagtcacttgctgtccttgactgaaggtgcgtaccttatcctggacaagagcattgccagttctcacaagagaaaaataaaaacaagacaagagtatggtcatctgtagtttgaagatgtcttaatccaaacagtgtagtaattggcgtcttcaggttttcacacacgcagtgtagttgagatttctcacccttttttactgatcattctacatgaaaagcaacatccaacattccactcccttcccttccgttccatagtactctctattttttttctttaatatttgtcaccttaaaattaaattaaccaacatccaatatttgaaggagcatttcattttaagtgtacttgtggttttttatctaacgtttaatcgtccgtcttatttaaaattatttaaattttttttatgattagtatttttattattattatatgataaaagataaatattaatttatgcgtgacttttttaaaaattttataaatttttcaaataagatggacaatcaaactttcaatataaaaatacacaactacacttaattaaaatgagacatacatattatctacctgttcgaatggcatccaacttttcctagcattcaatgaaaaggaaaaaaagactactgccaaagattcctccctatatacttccttcgtaaaaaaaacctagaaatagatatgatatatcttaatataacaaatctgggcaggcttctattcagattcgtttttttcaactagaaatagatatgatatatcttaatataacaaatctgggcaggcttctattcagattcgtttttttcaactgagggaatactagccaatttgcaatcatcagcccatcaggatgagtagttaactattggaaaatggcaaattcctaacaggataagttgtaaaaaaaacagaaatgggacttaaaactagtgtttcttactacaattaaactttgagcgattcgtagtcgttggtatagtgacattcaaggggcgctatccacttcagctgttctcccccttcttttctaactcacatctttcttttttcacgtgcacactttttaaactgctaaacggtacgtttttaaaaaataattatggaaaagttgttttaaaaactatattaatctattttttaagtttttaaactaataattaattaattatatattaatgagcaacaccgttttacgtacgagaagatgaagttcctaacaatacctcccgaactcactccttggttgtcattcaataggccagcaaatatacttgtgcttttcctcttcttttacagcatgcttgtatttttccttggctactgctttacagagaaggcaacatcttagcttctgatgacacatctgtgttctgttcctatgaagtgttttactaggaaaatgatcactgttcttatctttctccgatcatttttacgggaaagtgttttacacttttacaatcaatctacactgatcaccttttctaatccaatgaaccgtacctattataataccacctcaattagtgatagtaaaataaattttgtaactagtgataatactagtgtgttccatttgcttctaaaacaaggagtggatctcgttttggaagattacatgcatgagaggtttatttacaaaattgctatccctcaagcacagatgcacattctaccataatttttcaatatatcatatagatgactgttttttcaaacattggccaacaatatttatttaattacttagttattaagtaaagtgattagagtaccactagatcttcctaaaaaaatactttaaacacgcctctacgtttacacatatttttagaaaagatgaatagccaaactcaaaaagtcaattgcgcctatattaaaaaaaggaagtagtattagatataagttatcctcttgtttatctctcaaaattgttttgtttcgtcacagctggacgaatctcagatggacgcaatggggacgtagcggacgaccactaccatcggtacacggtacaagagaaattttacaagacagcccataaatgtccaagtgatgcatgttagatttataataactagtatggtggcccgcgcagattgcgcaactagcattattatattttctctcatataatagtatatatgttttctcattatattattaaaatatattacaatgacaacataattttaaattttgtaataactttacgaaactactaatgtgtaatattcaaattgtattttatatacatgttagttattaattatttttaatatcaaattttagttatttgtaaattatatatattcctatatagactctagactcgtcttttaatatttcttttttttaattctgaatttttattatttctaattgtatttctatgtggactctaaactcatctttcaatattctttaatttttaatttcaaatttctgttacttctaaattgtattcctatattaactataaactcttcttcccatgtttttattaattttaaattttagttatttgtaaattgtatttttatacggactctaaactctacttttaattttattatgtttattccgaattttagttagttttaaattcctatatggactctatactctacttctaatattcctttttttttaattccgaatttctatttttttcttaattgtatttctatatggactctatactctacttctaatattccttatttttgattccgaatttatattatttcctaattgtatttctatataaactctatactctatttctaatattccttatttttaattccgaaattcagttatttcctaattatatttctatatggactctagtctcctcttctaatattccttattttttaattccgaattttaatgatttctaaattgtatttatatatggactctagtattctcttctaatatttcttattttttaattctgaatttcagctatttctaaattgtatttctatatggactctgatttttctttttctacgattaatgtgagaatttctaggcaatgagagcgaatgtggaggcttatttttctattcctttaataatataatagattaatataatagatgtgtgatgttgtgaacaggaagatgtggatatcctgcataacttgggtgtcaattcctacagattctcgatttcgtgggcgagaattctaccaagtatttcaagaactgtacatgcagtgcttgttttaagtcggttctgaaatttgacctgactatggaccattcagttccttacttagctgtcctcgaatcatcgcaggaggccggcttggaggagttaattcagcaggaattgccttctacaaccgtctgatcaacgcactccttcagaaaggtaccctcccccttgctaatatattacgtacaatcttgtgcgttcgaaaaaaaagaaaggtaccctttcgacactgaaatattcaatgcacagataagatgttggttaaacttttaaaatgacattcaataatttcttatatgctgtttaaaaacaactcaaacaatatttatagatttgccttcaaaaatactaccacaatattattaaattttataaaattatttaatttaaaattgatggtcaaagctttaaaatccaatcaaatcgtgaaaacgaagtgttaaatatttatgaccaaaaggagtatatcacaacatgagttaagttgtcacattttcatactctaatctttgacaaatactacttgaattgttgcaatgttttttctttgagtaaattacgctcatgatatatgaacttgtgtgattggtgcaaatagatataacaacttgtaaattgctcactttgatataataatttggctagttggtgcgaaccaggtctaaatgatccacacaaataaaatttatctaaattagcacacactaataacgtagcagcatacacgtatgattatgatttggatatcttatttcgaatccaaataaaaggataaattagatgtgcaaaagtttatttttcatgtccaggatagagtatttatttcatttcttgagaaaatttgatcatctatatagctcgtctaatgtttttttatatgttcaagaccaagacaatttttatccgtacaattaactcctaaaaaatcattttaattttcatgttcagacaatctatttcatcgaaaatgtatttttgtgatagggtatttttagttattttgctttttcgttggtctaaatcctaaacaacaacaacaacaacaataatatagctagtataatttttttatgtgtaacaataattacacataagtatgtattatatttgtagataatggaaatggattatatctccggtttctgtcataagacacacaaccataagtttaatagtaataaaaaggtaaaataaaagtaaatcaaaatgagaaataaggtatgggacaaatcctttattattgactagcgttaaaccacataaatttttttaagctagcaattctaatgaaactacgccacccatagtggaatataagtatgtattatgttagatcaattttatttgtgtggttcatttttgcctaggtttgcatgaattagtcaagttattgtatcggaataaataatttacaagttattgtatctatttgcacccaccctataagttgtgtgaacacaatttgctcctttcttttcttttctttttcgtcaggcatacaaccattcgtgactctgaatcatttcgacattccgcacgaactggagacccggtacggcggctggttaggcgctgcaatccggtatacatacatggccaagttaatttcctcttctgtggttctgtcgcctcagcttcagcttaagcttaatcccgtgtatgtacatatgcatgttttcagggaggagtttgagtactactcggacgtctgcttcaatgcgttcggcgatcgggtcaggttctggacgacgttcaacgagccgaacctgtccaccaggcaccagtacattctgggagagttccctccgaaccactgctccccgccgttcggcaactgcagcagtggcgactcgcgccgggagccgtacgccgcggcgcacaacatcctgctctcccacgccgccgccgtccacaactacaagacgaattatcaggtggtcacacacttcacacaaccaaccctcgatggctcgatccctagctgaggcgcctgagctcctgcctggcactgtacatacgctagctagtgtttttttcgatgtgtcgtctgagatgcagaggtggttctgttttgtgtgtgtgcgctaggcaaagcaaggcggctcgatcgggatcgtgatcgcggtgaaatggtacgagccgctgacgaattccacggaggatgttcgggcggcacggcgtgcgctggccttcgaggtggattggtatggctttgcctttttgctcccctttcttcagtgatgcacacatgtaaattcagaatctttttatgagcgaagcagagattcggaatccaccaactagaatagcctgcaaaataataatgaaaaaataataccttgcgtacttcgtaaattaatgaagtacacccttaaaaaataatgcaacgcaccccaaatgattacgcacggtgatcacgaatagtgttgattttttttttagaaaaaaagaatgagaacgtatgctacttgttctaaagataaaaacaatgcaaactcagttcaacctgatgtagatagggatttcttcatttttgctgctcagctgccagcttgggtaaaaccggcaggctgtaatttgtaattgtaatcgcgtccaatctgctccggcggagaaccaccacagcaccctgtgcagtgtttgcatcatctctccttaaacttaataaaactagaccggcaactcttagccggtcctgcaaaaataaaaataaaaatgcaaacatgtgacaaaggctatgtgtttgtgttttgcagccttgcaggtatgcagagagtagaattattgatttttccctttgttatgtagctaccgacaaattgtcgaaagtgggagctttgaaagcgtcatgttgctcatgtcttatatatgtatgttgctttcaggtttttggatccaatattctttggtgattaccctagagaaatgagagagatcttatcatcaaatttgccaaagtttaccccagaagagaaaaaactactgcagaataacaaggttgatttcattgggataaatcattacacagcaatttacgcaaaggattgcatctattctccgtgcacgcttgacacttacgaggggaatgctctcgtatacgccattggtagaagaaacggcaaaataattggcaaacccgtaagaactacttgtctcttcttctgtaattactttctgcaacatttgcttagtcttatgcatctcatatgtgatatgatcgaccttgtagactgcacttcatgggtactttgtcgtcccagaagccatggaaaaggttgtcatgtacgtcaatgatagatatagaaacacaactatctacattactgagaacggtgagtgcctgagtggcaactgtcttggacttgggatatgcattggactgtaaaccatatgaaaaattagtagcagttcgtaggctttatgtgttcattttgttcctattgatcatgggggtcctgatatttcattttaattaggctactcacaacacagcgataccagcatggaagacttgatcaacgacgtcgaaagagtcaactacatgcatgattacctcaagtatctctcttcagcaatcaggtgatgtattattgctaaactttatatgcatatatgcacaatctattcatgtccagtagctcatattcagtctgttgggatatgtttactacaggaagggagcaaacgtagggggctacttcgcgtggtcaatcgtggacaattttgagtgggtttatggttacaccgtcaagtttgggttgtaccaagtggatttcgacacgcaggaaaggattccaaggatgtctgccaagtggtatagagatttcctcacgagctccagtcttacagacggtctccaagtgcggtcacgtagagcagattcgtgaataattccgatgctagaatacgtctagcactggatagttattttgtacttggagttgtatatatactcagatgtattgttgtgtacatgactacatactttatagttacttcagttatggacttgtgatcctatcaaaatgctctcaagctcaattcgtggacacacaagggggtgctagtacagcttagcataagtgtacttatttaccaatagagagcaccggagcaagctgtgtacgttatgtataggacgatgtgtttatgaagccatgtgtaaaatgttatcatgttttgtgaaagtgcatccgaagtttatttgtgtgatc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0513400, RefSeq:Os04g0513400