Difference between revisions of "Os04g0522800"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os04g0522800| Description = Photosystem II oxygen evolving complex protein PsbQ family protein| Version = NM_001059877.1 GI:115459483 GeneID:4336...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os04g0522800|
 
GeneName = Os04g0522800|

Revision as of 19:56, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os04g0522800

Description

Photosystem II oxygen evolving complex protein PsbQ family protein

Version

NM_001059877.1 GI:115459483 GeneID:4336432

Length

7935 bp

Definition

Oryza sativa Japonica Group Os04g0522800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:26557397..26565331

Sequence Coding Region

26564106..26564354,26564943..26565050

Expression

GEO Profiles:Os04g0522800

Genome Context

<gbrowseImage1> name=NC_008397:26557397..26565331 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:26557397..26565331 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggattgtgggattgaattgaagggctgcatttgtcggatcaacaactgcgctgttgaactcttctcaatggaggaggacttggtgattgatgatgaggactcgtgggaccttcttgcgagggatcttcggttgaaggctacattcttgtacattgacctcggccgtgtgatttgctcctgtgagattgatgaacacaagaagatgctcaccggtttagcgaacaagtttttctacttcatggatgagttgacgaatgcagtgagcagcagaagcatccccctcatgcaggtgtgctacagtgatacgactcttcttctccgcgaggtgctctccgcccttgtgccctcccagtaa</cdnaseq>

Protein Sequence

<aaseq>MDCGIELKGCICRINNCAVELFSMEEDLVIDDEDSWDLLARDLR LKATFLYIDLGRVICSCEIDEHKKMLTGLANKFFYFMDELTNAVSSRSIPLMQVCYSD TTLLLREVLSALVPSQ</aaseq>

Gene Sequence

<dnaseqindica>6710..6958#7547..7654#aaggtagagccaagctgcgctactattccccctcttcctttttctacggaagacgcagtcacacgctcaggcaacgcaggtaaagaaaaagagaagaaaaggcaaggtacaaacttgagacctgttcctccgttgctttattaatcattatcccggtgcttacttcttcttaattaatcaatagcaattagtggatttgttaagctgctctaggggaattattgggggcagggggcagaccggaatagaacaagaaaactgttctctcgggttctcagcttcgattgcatcgatcggtctcgaaattaaaaaaaatttaaagggggggaggtaaacccttttttagtgggttgcggggaagcatctctacgaagagggaacatgttggagcgttgagctttcctctcatcttatctccttcgtggtggttttaaattgggggaagaagacgacgaggtaaaagcgggtttttgtagagagaagaaaatatcggatttcggtttgagtgcggattggtaatgcgggaggaatcggggatttttttgtgtgttcgtccctctcgattcttggttttggaccagttgattcggatcgtgtgctcgtgattttgatcaacttaacatggaaaatggccatccttcgctatctaatcaaccactattcctttctttcttcgcttaacttcgtttgatgcagaatgctgaatgccatgcctgtcccctccttcttctccaggcattttttttcatgtccatcagcttttctccctgatcggaatatctcctacttgattggaaaatgttcttgatgagaaattaattagagaaggctccaggaggttaggaacaaatatcatggaggtgctcctaaatccccatgggtttcttggtccctggaggttggagggaatatctgtcctctggtctctgccctttagcctttattcgtcctgttcctttcgttccattcctaaatcctattccagtcacgccttctccgtccacgttgccattacttcattaagccctcactgaacatggttaaatcatcttattgtaaattcatcgatcgaagttgtgttcattggtcaaagctcaataaaattctaggtgttgatcatgcctagaggccaatgggcaaagatagggaagagaaccatccgactaataattttgtttgtggcaatcaagctgctatctttgcctgccctcgtcctcttctggaaactggaacagcgaccgaagacaagaaaagtagaatggaatgtagggcccacacaacttagctgctcattgagcatacctgattttggtatttttgctgaccattgattgattcccataattacctagagaacttgttgagttatgtatgtgttggtccatgaggcccatatactactcatatgtacatgtatataacagagttagagaaatgaaaaaagtagtgaagcttctagagaaaaattcccaaaacttcatggtatcagagccaatcggctggtggctggcgacggctaaaccctagcctcgccggagcttgtcgaggcgtgcagagaggtgctgagggagctgcgctggcagagctgcgcgtgtacgcggcgcaggagcgcgtggagctccaggtgaggagggaaacgctggtgctggagctcccggcgaggacgcagcggcgtcaacggcggcaggcagagccaacggcggccgcgcgcggagggagctgctggttgtgaggacggcactgctggtgctggtgtgaggatttggtgagctgctattgctgttctgttgctgaggcagagaagatcgagctgaggatttggtagtgtgctgttgctgctgaaaggaaaaggggaacacaaatttggtaagtgtgttgttgctgttgctgttgagcgagcagaggaattgtttgccggttgtgctattggtgtggcttgtgtgtgctgcggcaaggaggtgagcttgtgagtattgtactcctgtgtgtggttgagaaaggaagaaaaagaagggagtattgctgctggatctgttggtggtgtcgtgtgtgctgaagattacaggtgcagagagcaatagcaggtgaggaaagctgtagctagcttcatctagaagggaagaagcggctttggtgttggaaattaattattgtcaagaagtaaggcaacaggttgtgcaaggtgaatgtgaagttagtgcttcagattggcaggcaaccaacccaaattcgtgtgtgcgagaacacagtccaagcctcggcagtcacagagagggagaggggtgctgctgtgtcgagttccctgatcaggaggaaagaaaaccaggggacgttgtcttcaaggtgttagaatagagtgagtttgtaaaaaaaaaaaaaaaaaaaaaaggaatggagggaagtcaaggaattgaacaactgcttgcgaaaatggctgtagaaatacaagaaataagggaaagaatacggaaggagagggagaaaacaacagttcttggcaaccttgtcaacctcgcgcatcccatgcagatgcaggtacctcactcaacctggatattagactctggagcatctagacatgtaacaggtatgccaagtgagtttgtgtcatttactccatatccacccacatataaagaaactgttcagaccgccgatggtacttcacagcctatcaaaggtgtgggaagagtacagtgcactccatccattacattatcatcagtgttatatgctccctcctttccagttaatttggtatcaataagttctttggttgaccatatggattgttgggttactcttgatcgagaaaattgcctaatagaagagagaagaacaggaaggaagcttgggattggcattaggcagaacggattgtggtacttagatagaagcggaacaaataaagcactatgtagtgcattggcagttggtacaagtgaagaggaagctagattgattctccagcattgtcgattgggccatatgtgttttgaaactatgaggaagatatatcctgatgagatgagtaaggtggacagaagcaaactagtatgtgatgcatgtgaatatggaaagcatacaagagctacatatataagcagaggacttcggagcatatcaccctttatgttaatccactctgatgtgtggacttcccctattgtctcggtgagtggaatgaagtactttgtgacttttattgattgttactcccgaatgacctggatatatcttatgaaacataaaaatgaagtactaaaatgcttcaaggacttctacgcatttgttagaaaccaattcaacacatgtgtcaaaattatcagaactgataatgggaaagagtatgtgaacaatgaatttggtagtttcctttcgatagaagggatactacatcaaacttcttgtcctgacacaccaccgcagaatggggtggctgagaaaaagaatcgccatatcttggaggtggcacgttcactcatgtatactatgaatgtaccaaagttcctctggagtgaggcggtcatgacagctacatatcttatcaatcgtacaccatcaagaatacttgggatgaaggctccatatgagatggtatttggatgtaatgaatttattgttccaccaaaggtgtttggatgcgtatgctttgttcgagatcatagaccttctgtgggaaaattggatcccagagctatcaagtgcatatttataggttactcatctggtcatgaaaggatacaaatgttggagtccatctgagaggcgaacatttgtaagtatggatgtcacctttagagagtctattcctttctatggagaaatgacaagatttgagttatttgttttctgatcttgacaatccaatcatgagtgangttaggtatgaaggggttaatgaatnactaggnatggangtaggnggatgaatnaaagaggacgaaggntgttattgggncaaatcccatgccctatggaanactccacatgagcagaattggaggaaaccacatgaagaagaaaatctacaggtttacacaaggagaaagccaaggtccttggagacacaacaggtagaacaacaacctctaacaattgataggaatgagatggtggaacaacatcaacaacctctagtcattgatgaaataaatgatcaatcttcttatcagtcagatcctatacaagagaataccgagacagggggagaggagagtgaaatatcaggagaggaatctaacttgcctattgctaataggaaagggataagaagcacggcaggaaagccccctataagatatggctttgaggaggttgaggaggaaaatgggaatgacatagctaattatgtgtcatattcatctttatctcctgcctatagggcttttattgcatcatttcaatccatagtgatcccaaaggattggagagaagcgaagaatgatccaaagtggcatgaggcaatgatggaggagatgtcagcacttgagaagaacaagacctgggagcttgtaccttttccaacaggtaagaaggtggttagttgcaagtgggtgaatgctgtaaaacaagatccatttgggaaagtagaaaggtacaaggcaaggcttgtggcaaaagggtacagtcaaacatatggaatcgattatgatgaaacctttgcacctgttgcaaagatgagcacagtgagaaccttgatatcatgtgcagctaactttgattggccactataccaactagatgttaagaatgcatttttgcatggagatcttcaagaggaagtttatatggagattccaccgggtttttccacctctcaaactaaaggaaaggtattgagattgaagaaatccttgtatggccttaagcagtcaccaagggcttggtttgatagatttagacgtgcaatgtgtggcatgggctacaaacagtgcaatggagaccatacattgttttatcgtcaccgtggaaagaagattgccatcctggctgtatatgtggatgacataattattacaggagatgacactcaagaaatagctcagttaaaagagaatataagcaaagaatttgaagtcaaagatcttggtcagctcaaatattttttgggcattgagattgcaagatctcctagagggatagttctttcacaacgaaagtatgtattggatctactttgtgacacaggtatgctcggttgccgacctgcctctacaccaattgagcaaaatcataagttatgtgctgaattaggagatccagtgaataaagaaagatatcaaagacttgtgggacgactgatatatttgtgtcataccagacctgacataacttatgctgtgagtgttgttagtcgatacatgcatgaccctcgaagtggtcacatggacgcagtatatagaatcctgagatatttaaaagggagcccaggaaaaggcttatggttcaagaaaaatggacatctaggtgtggagggctactgtgatgcggactgggctagcagccttgacgataggaggtcaacctctggttactgcgtatttgttggtggcaatttggtctcttggaggagcaagaaacaaccggtagtgtctcgctcaactgctgaggcagaatacagggcaatgtcagtgagtttaagtgagctgttatggttgagaaatcttctttctgagttaaagttgctaatgaatattcccatgaagtgtggtgtgacaataagtcggctattagcatcgctaacaatccagttcagcatgatcgaacaaaacatgtggagatagatcgtttttttatcaaggaaaaactagatgaagggattttgaagctaggttttgttatgtcgggggaacaagtagctgactgtttaacaaaagctttaagtgttggggagtgtacttcatcgtgtaacaagatgggcatgatagatatctatcgcccatcttgagggggagtgttgagttatgtatgtgttggcccatgaggcccatatactactcatatgtacatgtatataacagagttagagaaatgaaaaaagtagtgaagcttctagagaaaaattcccaaaacttcagaactagtattgggttgtttggataccatctcatcagagtaccatgtgttgagcttcactagagactttgtgaaaaaaaattacttcagaagtcactctagtttatatatcttacagttgcaaacgtctactttatcacaacctcactttttttttcttacaagcagtttcttgtggtttcccctattgcacctttggctgagtttagttccaaaatttttcttcaaacttgcaacttttccatcacatcaaaactttcctacagacacaaactttcaacttttccgtcattccaattttaaccaaacttctatttttggcgtgaactaaacacaccctttcttgatctgcaagctccaggcaatgcgccaattacacagaagtctcctcttttcccaagagcgttatcctctgactaatattgtatcttctcattgactagttcgcccaattgctacatggcttcctttcttttacactttgttgcatttgttgcttctaaacatagtacaagaattagcttcctctttctcttctttacttgatgatgcgccttgatgctataaatatatctgataggtcttgaccattccaagcacaacttgggataagacgaagtagtgccaaattatggattgtgggattgaattgaagggctgcatttgtcggatcaacaactgcgctgttgaactcttctcaatggaggaggacttggtgattgatgatgaggactcgtgggaccttcttgcgagggatcttcggttgaaggctacattcttgtacattgacctcggccgtgtgatttgctcctgtgagattgatgaacacaagaagatgctcaccggtttagcgaacaagtttttctacttcatggatgaggtgagcattgcttccctcgttcttggcaagctttcgcccaaagcatgtgtctctttttttatatataaaagcatgcctcttatttcattgcaaatttagtaattcacacgtatttgaagagctcaaggatgcctttgattatatataacactcctgttttagtcatttcctgtaataatgctttgtcatttcacattaaacgtgattggttactccatcctatctagctacaaattttatatagtttttattcataatttgttatctaagtcaacaactcaacattttaagctaagctaatgggttgtaaggggagaaggttatcttggaattttctggatgtttaatgtaaatggataattatgcttccttaaaaaaagttgttaacgtccttttcgtgtttttgttttagctgtttatggttcatgaatcatgactaggctcacccaatagaattagaaaggtgctcctagcccgttcggcaatgtacttatttgtcaaatcagttatggacaatcaacacacttgattaatttgtggatatattcgctgtctatctaatttaagatgcctttgcacaaatggcagttgacgaatgcagtgagcagcagaagcatccccctcatgcaggtgtgctacagtgatacgactcttcttctccgcgaggtgctctccgcccttgtgccctcccagtaatttgggcctaattcaagattagatgccccctgcaaggctagtattcgctctgcttctgcagcatcgcaatgtatggagcaggcgagggtaagatctgagagcctcacattttcttggaagcaagaaacacccagaagaggatggataaggaaaatgtgagaagaatgaggtgcagaatcaccctcacctatgtacatatctttaatcagcttcagagttggaacttggaagcactttaatggattagcatccggtttgcaccaatgagatgcacttctctg</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0522800, RefSeq:Os04g0522800