Difference between revisions of "Os04g0555600"
(Created page with "{{JaponicaGene|
GeneName = Os04g0555600|
Description = Concanavalin A-like lectin/glucanase domain containing protein|
Version = NM_001060053.1 GI:115459835 GeneID:4336621|...") |
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| Line 1: | Line 1: | ||
| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os04g0555600| | GeneName = Os04g0555600| | ||
Revision as of 19:57, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
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Structured Information
| Gene Name |
Os04g0555600 |
|---|---|
| Description |
Concanavalin A-like lectin/glucanase domain containing protein |
| Version |
NM_001060053.1 GI:115459835 GeneID:4336621 |
| Length |
8627 bp |
| Definition |
Oryza sativa Japonica Group Os04g0555600, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 4:28205317..28213943 |
| Sequence Coding Region |
28205317..28205583,28206324..28206656,28207180..28207261,28207481..28207556,28207711..28207825 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008397:28205317..28213943 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008397:28205317..28213943 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>gccgttgttgccgcggagctcctgccttacctcccctgcggcgatgagccatctccgcgcactcgtatggccgtgggcattcacgccacgctccgcgcctgcacacgcaatcgtgccatgtgctcttcatcgggccttctacccgtcctcctcgattctgctgagaagctactcattggaatgggtcgggcaagtagctgggacggaacaccactgctccattgcatccagctattgggtgggcactcgcttagcgtgaaggacttgcattcgtggcttggtttggttaagaaggcgcttggtacaagctgggcaacaccactgatgctggcacttgagaaagccatggggagtgaggaagcaagaggtcctgctgcgacatttgagtttgacggggagagctctggcttgcttggccctggtgacagcaggtggcccttctctaatggctacgggtttgctacttggatttacatagaatcattctcagatacacttagtacagcaacagctgcagctgccattgctgctgcagccgcagcaacatctggaaaatcatcagcaatgtcagcagctgctgcagccagcgctcttgcaggagaaggaacaacacacatgcctagactttttagctttctctcttcagataatcagggtgtggaggcttacttccatggacagttcttggtggtggaaagtgggggtgggaggggtaagaaggcttctctgcacttcacttatgcgtttaaacctcagcgatggtacttcgttgggttggagcacacaaacaagcatggtttgcttggaaagggcgacagtgaattgcggttgtacgttgatggaagcttgcatgagagtcgtccttttgagttcccacgcatctcaaaaccactagcattttgctgcattggaacgaatcctccaccaactattgcaggcctgcagaggcggaggcgacaatgtccattgtttgcagaaatgggacctatatacatttttagggagccaattgggccagaaaggatgggtcgtctggcatcccgtggaggagatgtactccctagttttggaaatggtgcaggtttgccttggagagcaaccaatgaccatgttaagaacatggccgaagagagttttacattgaaccaacagataggaggatgcttacatcttctttatcatcctagtcttctgaatggacgattatgtccagatgcttccccttctggctcagcaggcactcaccgaaggcctgcagaagttcttgggttggttcatgtttcatctcgtgtgcggcctgcggagtctttatgggccttagcctatgggggtccaatggctttacttccgttgactataagcaatgtgcagatggatagtcttgaacctatgcttggtgaattgtcgattgccactgcttctctttctgccccaattttcaggattatttccctggctattcagcatcctggaaataatgaagaattatgtcggacatgttcaccggagattttgtcacgtgttttacattaccaattacaagcatttccaaagatggaaggtggagagggggaggcagtgactgatgaggagctagttgatgcaattgtatccttgtgccaatctcaaagaaacaaccatgagcttaaagtgcagcttttcagtactttgctgttggacctgaagatgtggagttcatgtacttatggtttacagaagaagcttctgtcctcgcttgcagacatgatatttacagaggctgcttgcatgagggatgcaaatgcattgcaaatgcttcttgatagctgcagaaggtgctactgggcaatccgggaaccaaattcgatcgataactttgcccttactggaacaaagagatccttgggtgaaattaatgctctgattgatgaactcttggttgttgttgaacttctgttaggatcagcatcttccacagcagcttctgatgatgttcgctgcttgattggatttgttgttgattgcccacagcctaatcaggttgcaagggtgttgcacctcatctataggttgattgtgcagcctaacatttctagagccaacatgtttgctcagtcattcatatcttgtggtggtgtggatgcacttctcgttcttttacagagggaagctaaagctggtaacaacagtattttggacaattctgatgcacttttaagtgaaaatgattttttaaggaatgatgattcagacacaaaagctgctagtggtgaagcaaagagccaggatgatcaaattcaatcagttgaacttgaacagcacgaatccatccttcatgaagaacatactgagctgggatctacaagcacaaatgatgtgccttgtgagattttgggatcaagtataggaaggaagttgtccagttctgaaaatcagctgctaaagaatttgggtggcatcaacttctcaattactgctgacaatgtccggaataatgtttacaatgttgacaaaggtgatggcattgttgttggaatcattcacattttgggtgctctagttgcatcaggtcacctaaagtttgcctcaagggctgcaaatccaaatttacctggtggccttctgacgacagttcatgaagaaggaaataccatgtcagaagatagagtgtcactgttactgtttgctctgcagaaagcatttcaagcagccccaaggaggcttatgactgtaaatgtctatatggctttaatttctgctgcgatcaatgtttcttcagttgatgaaaatctaaacctatatgattgtggccaccgttttgaacatattcaactgttgctagtcttgctccgttcgcttccatatgcatcaaggtcattccaatctcgtgctatacaggatcttctgtttttggcttgcagtcatccagagaatagaaccacgatgacctcaatttcagaatggccagaatggatttcggaggttttgatttataatcatgagatgggtgctaagaaatatgctgatggcataagcattggtgatattgaagacctcatacacaatttcctgattatcatgttggagcattcaatgcggcaaaaagatgggtggaaggatgtggaagcaacaattcattgtgcagagtggctttcaatggttggaggatctagcacaggagaccaaagaatcagacgggaagaatcattgccaattttaaaaaggagattgctaggcggtctgcttgatttttctgccagagaacttcaagtccagactgaagtaattgctgcagctgcagctggtgttgcagctgagggtttatctcctgaagaagcaaaaacccaagcggaaaatgctgctcatctttcagtagcactagcggaaaatgcaatagttattctgatgcttgtagaagatcatctgaggtcacaaggtcaacatttttgcacatccagatcacttgatagtgctgtcccttctgcctcaatggtttcgtctgctgccagtcgatcaaattcattgtgtagaagtggtaatgagcctatggatgctgggacctcaagacgatcatctttgtccactgatgctggtggccttccattagatgtgcttacttcaatggctgattcaaacggacaaatctctgctgctgtgatggagcgtcttacatcagcagcagcagctgaaccttatgaatctgtcaaacatgcatttgtttcttatgggagctgcattgcagatcttgctgaaagttggaagtacaggagccgcttgtggtatggcgttggaatcccatccaaatctgatacatttggtggcggtggaagtggttgggaattttggaaatctgttctggagaaggactcaaatggg</cdnaseq> |
| Protein Sequence |
<aaseq>AVVAAELLPYLPCGDEPSPRTRMAVGIHATLRACTRNRAMCSSS GLLPVLLDSAEKLLIGMGRASSWDGTPLLHCIQLLGGHSLSVKDLHSWLGLVKKALGT SWATPLMLALEKAMGSEEARGPAATFEFDGESSGLLGPGDSRWPFSNGYGFATWIYIE SFSDTLSTATAAAAIAAAAAATSGKSSAMSAAAAASALAGEGTTHMPRLFSFLSSDNQ GVEAYFHGQFLVVESGGGRGKKASLHFTYAFKPQRWYFVGLEHTNKHGLLGKGDSELR LYVDGSLHESRPFEFPRISKPLAFCCIGTNPPPTIAGLQRRRRQCPLFAEMGPIYIFR EPIGPERMGRLASRGGDVLPSFGNGAGLPWRATNDHVKNMAEESFTLNQQIGGCLHLL YHPSLLNGRLCPDASPSGSAGTHRRPAEVLGLVHVSSRVRPAESLWALAYGGPMALLP LTISNVQMDSLEPMLGELSIATASLSAPIFRIISLAIQHPGNNEELCRTCSPEILSRV LHYQLQAFPKMEGGEGEAVTDEELVDAIVSLCQSQRNNHELKVQLFSTLLLDLKMWSS CTYGLQKKLLSSLADMIFTEAACMRDANALQMLLDSCRRCYWAIREPNSIDNFALTGT KRSLGEINALIDELLVVVELLLGSASSTAASDDVRCLIGFVVDCPQPNQVARVLHLIY RLIVQPNISRANMFAQSFISCGGVDALLVLLQREAKAGNNSILDNSDALLSENDFLRN DDSDTKAASGEAKSQDDQIQSVELEQHESILHEEHTELGSTSTNDVPCEILGSSIGRK LSSSENQLLKNLGGINFSITADNVRNNVYNVDKGDGIVVGIIHILGALVASGHLKFAS RAANPNLPGGLLTTVHEEGNTMSEDRVSLLLFALQKAFQAAPRRLMTVNVYMALISAA INVSSVDENLNLYDCGHRFEHIQLLLVLLRSLPYASRSFQSRAIQDLLFLACSHPENR TTMTSISEWPEWISEVLIYNHEMGAKKYADGISIGDIEDLIHNFLIIMLEHSMRQKDG WKDVEATIHCAEWLSMVGGSSTGDQRIRREESLPILKRRLLGGLLDFSARELQVQTEV IAAAAAGVAAEGLSPEEAKTQAENAAHLSVALAENAIVILMLVEDHLRSQGQHFCTSR SLDSAVPSASMVSSAASRSNSLCRSGNEPMDAGTSRRSSLSTDAGGLPLDVLTSMADS NGQISAAVMERLTSAAAAEPYESVKHAFVSYGSCIADLAESWKYRSRLWYGVGIPSKS DTFGGGGSGWEFWKSVLEKDSNG</aaseq> |
| Gene Sequence |
<dnaseqindica>8361..8627#7288..7620#6683..6764#6388..6463#6119..6233#5904..6008#4777..4911#3562..4284#2056..2837#3..1239#ccgccgttgttgccgcggagctcctgccttacctcccctgcggcgatgagccatctccgcgcactcgtatggccgtgggcattcacgccacgctccgcgcctgcacacgcaatcgtgccatgtgctcttcatcgggccttctacccgtcctcctcgattctgctgagaagctactcattggaatgggtcgggcaagtagctgggacggaacaccactgctccattgcatccagctattgggtgggcactcgcttagcgtgaaggacttgcattcgtggcttggtttggttaagaaggcgcttggtacaagctgggcaacaccactgatgctggcacttgagaaagccatggggagtgaggaagcaagaggtcctgctgcgacatttgagtttgacggggagagctctggcttgcttggccctggtgacagcaggtggcccttctctaatggctacgggtttgctacttggatttacatagaatcattctcagatacacttagtacagcaacagctgcagctgccattgctgctgcagccgcagcaacatctggaaaatcatcagcaatgtcagcagctgctgcagccagcgctcttgcaggagaaggaacaacacacatgcctagactttttagctttctctcttcagataatcagggtgtggaggcttacttccatggacagttcttggtggtggaaagtgggggtgggaggggtaagaaggcttctctgcacttcacttatgcgtttaaacctcagcgatggtacttcgttgggttggagcacacaaacaagcatggtttgcttggaaagggcgacagtgaattgcggttgtacgttgatggaagcttgcatgagagtcgtccttttgagttcccacgcatctcaaaaccactagcattttgctgcattggaacgaatcctccaccaactattgcaggcctgcagaggcggaggcgacaatgtccattgtttgcagaaatgggacctatatacatttttagggagccaattgggccagaaaggatgggtcgtctggcatcccgtggaggagatgtactccctagttttggaaatggtgcaggtttgccttggagagcaaccaatgaccatgttaagaacatggccgaagagagttttacattgaaccaacagataggaggatgcttacatcttctttatcatcctagtcttctgaatggacgattatgtccagatgcttccccttctggctcagcaggtttgtccccccccccttttgttgacggagtagtttaccccttttcccacattaacatcaacttatatgttttaggtccaatttacacatccttgttggttccagttttagtgaaataggtatagatacagaaatgttatgttactcaaactcctgaacacattatttaaattcttgctctggacaaaacaaattgttatgctcaaagtcatataactaatgtgcctttgaccaataaaaaaagggctctgatttctcttaggacctttaacttttcaatggcccgctttggttcagaaactttcatttaatggtctgtaaatagtatctttaaaaagttttggttgtccagcaattttctcaatttgtttccataatagcatccttgaaaaaaaattcagtctgaacacaaactgtatcctaaagtcgaatgaccaaaatagggcttttcccatagcaaaacataagagttctcaaaaatgaggtgggagctcttgagagcaagctgctaactgtagtttctaccaagaaattgtatttactcacaggtgaatcatatcttcaatgccagtagtttctgtcaattgttgataaatctttgtgatgacactctcttgagtcatctatacccttttcagtgtgcaaagtaattgatatatcatgttccttgttgctgaaatgatgtcagattattgatttttgatatgtactgggctaaccgaatgtcaaaaaattcccaagcttcctcatagtggcactttgacacgttcggtcatgtacatgattttattgatagtatcttcttttgaactgtaggcactcaccgaaggcctgcagaagttcttgggttggttcatgtttcatctcgtgtgcggcctgcggagtctttatgggccttagcctatgggggtccaatggctttacttccgttgactataagcaatgtgcagatggatagtcttgaacctatgcttggtgaattgtcgattgccactgcttctctttctgccccaattttcaggattatttccctggctattcagcatcctggaaataatgaagaattatgtcggacatgttcaccggagattttgtcacgtgttttacattaccaattacaagcatttccaaagatggaaggtggagagggggaggcagtgactgatgaggagctagttgatgcaattgtatccttgtgccaatctcaaagaaacaaccatgagcttaaagtgcagcttttcagtactttgctgttggacctgaagatgtggagttcatgtacttatggtttacagaagaagcttctgtcctcgcttgcagacatgatatttacagaggctgcttgcatgagggatgcaaatgcattgcaaatgcttcttgatagctgcagaaggtgctactgggcaatccgggaaccaaattcgatcgataactttgcccttactggaacaaagagatccttgggtgaaattaatgctctgattgatgaactcttggttgttgttgaacttctgttaggatcagcatcttccacagcagcttctgatgatgttcgctgcttgattggatttgttgttgattgcccacagcctaatcaggtaatttggccattgattggtagacaaactcatggtgagatgcctctagtgtttcctcctgaggcattgtttgaatggaaatacccaaccttctacatattttatacgcagatgttcttgaactaaagatcataatggtactactactacctaatatctagtgagcatatacactgaaaactgtaaagttacaatttgatgtatttatttccatacatcatatcataaggataagtgggtattattttaaccgtgagtcacaacaaatttgatggtgcatcagctctttgctcttaaagcttgtctgtggttactccttccagttccataattcttgacgttttggatgaggttgaggtcaaacaattagaaccttgactatcactaacttttaaaatatttaatttgaagacactagaacatgatgcatatattagtttaaaaatattttttaaaagctaaatatttacttattttttgtatatattataatagaaaatcatagccaaagattttggagatcatgttgttgtccaaaacgacaagaattatggaactggagggagtacgtgctatttttctgttgggatatatttatacttgccttgatcatttgaaagacaatacaaatgtgtagcagtctagggccatcttatctatatagctcatctgacaatatagtctaagctgtttcttgtgatcttaacaatgtccttgttaacaggttgcaagggtgttgcacctcatctataggttgattgtgcagcctaacatttctagagccaacatgtttgctcagtcattcatatcttgtggtggtgtggatgcacttctcgttcttttacagagggaagctaaagctggtaacaacagtattttggacaattctgatgcacttttaagtgaaaatgattttttaaggaatgatgattcagacacaaaagctgctagtggtgaagcaaagagccaggatgatcaaattcaatcagttgaacttgaacagcacgaatccatccttcatgaagaacatactgagctgggatctacaagcacaaatgatgtgccttgtgagattttgggatcaagtataggaaggaagttgtccagttctgaaaatcagctgctaaagaatttgggtggcatcaacttctcaattactgctgacaatgtccggaataatgtttacaatgttgacaaaggtgatggcattgttgttggaatcattcacattttgggtgctctagttgcatcaggtcacctaaagtttgcctcaagggctgcaaatccaaatttacctggtggccttctgacgacagttcatgaagaaggaaataccatgtcagaagatagagtgtcactgttactgtttgctctgcagaaagcatttcaagcagccccaaggaggcttatgactgtaaatgtctatatggctttaatttctgctgcggtatgttgtttatgtgctgtctagataattgtatatgtttttgacttccacgaaatcgatttcctatgattaattaacttaagagtaaattacttagttgcctgttggttaccttatcacctgacctttttctcaactcaggccacatgaaaaactgatatctaagtttctatcaacaaaatctcttggattgtgctttatggtatttcaagtaaaaataagcatgaacgctagattttctctgcccagtcgagtgtccgagtccatgtcagttttggcggactttgcagttatatcctttacttagtttttttttgtccattccatttggaatggcataagcaccacagtgtttcaagtttgattagtattataggctctagactctaatattatcttgaatgcagattagtgtttcttccatttaattattacccaactgtttacaattcgaagtttctacttttgatgttgttatgatcttgaatgcagatcaatgtttcttcagttgatgaaaatctaaacctatatgattgtggccaccgttttgaacatattcaactgttgctagtcttgctccgttcgcttccatatgcatcaaggtcattccaatctcgtgctatacaggttggttttcatcttcttgccataaactttccaggatttgtgctgtcatgtcgatggtagtttcttatggtatatgctatgcgtggtttggctttttttaccttgtgataattgtggagtagtatttgttacagaaaaaacaccaatctttgccttgttgttttgtggttttgtgaagattatgaagaattgaagataaatccacacaatatttcttttggtcaatagggtatgaatatggcatgcatttattttcagtgaaaaatccttataaagtgatttgttatttgttaagtactagtacttcatccataaatattgggcacattttgttttgcacatagaccaatgagagattgacaaatgatctagtattccatccataaatattgggcacaatttgttttgcacataggccatggagagattgacaagtgatccaaacatgctcttaggattttgagctgttttgaacttaggctttatggtattagtcagtttctttttgctttattctaattattctcattgaaatcacatgcagctgtggtttaatacatttacatgggacaaccagctgccatgttctcagtagaagtcagccaagaactaagagaattaaggaaatatgtgtcactttgcactgttcaagcacatttcttttcttttggaaactcaagaaaagaaaaagaatgtatgcttgaactatgcaactgacacatatttagtgggaatattccatgccgtgtttaactatattcttatgcttttaaccaaacacctgcatggctgcacaatcatattcacttccattgcattatatgcccacatataacctctatgttagtactgtttggtgttttttttttattatttttgctcatcagtactgtttgctgttatctattctttgttttttcctgaaaccttgtttgcgaccttacctgtttaaatttcttatggtgtcaaaatttccctctatattatttcaggatcttctgtttttggcttgcagtcatccagagaatagaaccacgatgacctcaatttcagaatggccagaatggatttcggaggttttgatttataatcatgaggtaagtatcgtaggccttttttttatgtcagaatatattgccagaagaatcatgctacattttgtgctgtccactacccattgatctaattcacaaatttctaattatagatgggtgctaagaaatatgctgatggcataagcattggtgatattgaagacctcatacacaatttcctgattatcatgttggagcattcaatgcggcaaaaagatgggtggaaggcaagctatttttcttttgtagagcatcctatgcagaaaatcttttccgctgttgccatcccaaccttcctctcttatttgtgtttgtgatgcttgtatcattgctgattttggcctatttcctcataattttgttgttgctgtgacaatttaggatgtggaagcaacaattcattgtgcagagtggctttcaatggttggaggatctagcacaggagaccaaagaatcaggtgctctctctctctctctctctctctctctctctctctctctcgtgctcccttctgtgtgcaggctagcagagggaatgcgtgaggagttttgacctgaaattggcaattggcttagatagagaaagagtcattttctctacaatttttctggcctttttacttgtggcattattatcttgctccttttataacaatatggcacttatgttcttttagacgggaagaatcattgccaattttaaaaaggagattgctaggcggtctgcttgatttttctgccagagaacttcaagtccaggtggttggactttcctctaaaagttacagtttactttctgtgcagagatgttttgtgtatatgtgtgagccttttttttttttgtatttttttgctctttctactttctgcactagttttttttacctttgccttgtgctgtatagtttggtcctggcctagtttaaatggtggtaataatccagaaaagttcagcatgaacttacaaattttggtactgtaatggtcaaaatggtggaacactaaaactggtagctttgactacatcactgcttactctgcacaaaagaaaagggttgacacctagacaataccatgtcagtggcattggtttctgttatcaatgttactgggtgtactttaccatttgcattgtattgtttatgttaatttgaagatagctgtctttgttatgttttgatacaatttcgtgaagtttgataattctatcattttcatggatactgtttcatcttatgttagtcaaatctataatgtctttgttttgcttgtcatacaacagactgaagtaattgctgcagctgcagctggtgttgcagctgagggtttatctcctgaagaagcaaaaacccaagcggaaaatgctgctcatctttcagtagcactagcggaaaatgcaatagttattctgatgcttgtagaagatcatctgaggtcacaaggtcaacatttttgcacatccagatcacttgatagtgctgtcccttctgcctcaatggtttcgtctgctgccagtcgatcaaattcattgtgtagaagtggtaatgagcctatggatgctgggacctcaagacgatcatctttgtccactgatgctggtggccttccattagatgtatgtaacgcatggctatatatattttatgttacttcagctattagcatcattttgatcaaatgatatttatttctaacaggactcaaaactggaatacttgtatttttaggtctatatgcactagcatgtttcgtcaacatgtttgttctgagattccatttactattttcttcaagatggtgcatagttgcaaaaggtggcactatgtgtcacaattagtcacctaagtttttagaatttttttaatctatattctggcttactactgctggtttttcgtcatagttacctatatctttgaggctctttatgccagtcacttaggctaccctgtcctgcattggtttttaaccacatgttacaggagaatattattgccatggtgaatactgctcttcttttttttaaaaaaaaatctacatagacaataatactgaatggacggaggtatatgtctaatggttcatacagaaagatgcataccactttactggataggaattctgaaagaaagttctaaatatgtgatacgtaggaaaattcatatgcctttcagtctgtagaatgcacaattatgggaagttgacagcatgataatgcatgtaaaacagacaagtgctattgaaagaaatatcattagttttaatagatttctggtcacgtattgactatatatagagtccactgttccttcatatgaatgtagtttcattcttgtttactgtgtgatcaagcaggtgcttacttcaatggctgattcaaacggacaaatctctgctgctgtgatggagcgtcttacatcagcagcagcagctgaaccttatgaatctgtcaaacatgcatttgtttcttatgggagctgcattgcagatcttgctgaaagttggaagtacaggagccgcttgtggtatggcgttggaatcccatccaaatctgatacatttggtggcggtggaagtggttgggaattttggaaatctgttctggagaaggactcaaatggg</dnaseqindica> 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