Difference between revisions of "Os04g0558400"
(Created page with "{{JaponicaGene|
GeneName = Os04g0558400|
Description = Acyl-CoA thioesterase family protein|
Version = NM_001060068.1 GI:115459865 GeneID:4336637|
Length = 6415 bp|
Defin...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os04g0558400| | GeneName = Os04g0558400| | ||
Revision as of 19:57, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os04g0558400 |
|---|---|
| Description |
Acyl-CoA thioesterase family protein |
| Version |
NM_001060068.1 GI:115459865 GeneID:4336637 |
| Length |
6415 bp |
| Definition |
Oryza sativa Japonica Group Os04g0558400, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 4:28382650..28389064 |
| Sequence Coding Region |
28382789..28382804,28382880..28382972,28383671..28383738,28384204..28384285,28384420..28384466 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008397:28382650..28389064 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008397:28382650..28389064 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggatcgggaagaagtgacggagttcctcggccaggtgcccctcctgcagtgcctccccagctcctccatccgcaggatcgccgacgccgtcctggtgaagcgctacgaacctggtggttacgttgctcgtgaaggtgaccctgtagatggcctttacatcatattggatgggcaggctgaggtttcagctcctgcaaacacagaagaagaaaaccgccctgactatgtgttaaataagtatgactactttggttatggaaccaatagttctgtgcatcaagtaaatgttattgcagtatcaaagctgacctgcttcgtattgccaaatcaatatggacacttgttgcaaccaaagaccatttggagtgcagaagagacacctgagaaccattctttgctagaacaaattttgcacttagagccattggaggtcgatatcttccgtgggtttactttgccaggagctccgacttttaggcaagtttttggaggacagttgataggacaggcactagcagcagcatccaagaccgttgactgcctaaaagcggtgcacagtttgcacgcaattttccttatcgcaggagacaagaatttgccaataatatatcaggttcatcgggcgcgcgatggaacaagctttgccaccagaaaagtggaggcaaagcaaaagggccttgtcattttcaccttgattgcttcattccagaaagacgaattagggtttgagcatcaagctgcaatcatgcctgatgttcctcctccagaagagctcctgaatctggaagagatacgggaaagaagacttactgatcctcgcttcccaatgcaatataggaactcagctgccaagaaaaagttcgtaccttggcccatagaaatgaggttttgtgaagattcagcatctcaacataaaccaagcttaaattattggtttagagccagaggaaaactttctgatgatccagcactgcataggtgtgttgtagcatatgcttcggatctactatattctggtgtcagcctaaatcctcatagggagaagggtctgaagacatactcactcagtcttgatcactcgatttggttccacaagcctgtgaaagctgatgattggcttttatatgtgatcgacagcccatctgcacacggtgggcggggttttgttacagggcgaatgttcaaccgacaaggagagctcgtcatgtcgttgacccaagaggcgctgattaggagggcgaagacgccaggacaaccgtcacaaaccccaaggccaaagctttga</cdnaseq> |
| Protein Sequence |
<aaseq>MDREEVTEFLGQVPLLQCLPSSSIRRIADAVLVKRYEPGGYVAR EGDPVDGLYIILDGQAEVSAPANTEEENRPDYVLNKYDYFGYGTNSSVHQVNVIAVSK LTCFVLPNQYGHLLQPKTIWSAEETPENHSLLEQILHLEPLEVDIFRGFTLPGAPTFR QVFGGQLIGQALAAASKTVDCLKAVHSLHAIFLIAGDKNLPIIYQVHRARDGTSFATR KVEAKQKGLVIFTLIASFQKDELGFEHQAAIMPDVPPPEELLNLEEIRERRLTDPRFP MQYRNSAAKKKFVPWPIEMRFCEDSASQHKPSLNYWFRARGKLSDDPALHRCVVAYAS DLLYSGVSLNPHREKGLKTYSLSLDHSIWFHKPVKADDWLLYVIDSPSAHGGRGFVTG RMFNRQGELVMSLTQEALIRRAKTPGQPSQTPRPKL</aaseq> |
| Gene Sequence |
<dnaseqindica>140..155#231..323#1022..1089#1555..1636#1771..1817#1927..2052#2431..2506#3015..3104#3500..3612#4554..4616#4688..4743#5080..5172#5436..5492#5569..5670#5756..5804#5896..5964#6064..6150#atctccttcgctttaaattttgtggtagatttttgtctccttcgctctccacgctaccgcctcgccgtgccggagcccgggcgttccccgccgccgagaacctccgcctccgcctccatctcctccgccgccgccgcagatggatcgggaagaaggtaaagcagcgcagagcccgccgaatttaggagcgctcctggctaatccgaggggtggttgccattggtgtgcagtgacggagttcctcggccaggtgcccctcctgcagtgcctccccagctcctccatccgcaggatcgccgacgccgtcctggtgaagcgctacggtgagtagcacacggtccccatcactgtatcactcgctctagtttttgcgaccttcgattggttggtggttatggtgaacgtggcggcggcggattcctgatgctcgttggtgggagatttttttttagattagtaaattagcggtattctccaattgcgtacccgatttttgtggagctcgctggctatgtttgatttgctgctgtgtatgtatatgtataggtttaatcaacttgcttaaaaaggtgactattagaggcttagagcatcaccccctataatagggtgcttccattcaacgcccaagctagctactataagattcattttttttagaacaataacaatgttatagattttctttatagatcatggggaactggggatatcattggcaatagtacacattgatttgacatgtaatgcttgagagaaaattggtatcagttcaataacgaagatcaggcatccaaatccttgcaagcgaggactcaagcctgggtgttcacctacgcctgccacctacctcacttcctctcactgatttagtgatttttagttctcaacgcatgtttggcattatcccctttctagagaagtgttgtttctttttttggtactgaaagtgaatgtggtttcaagttggaatcaagctgattacatgtctgttcgttgtgatacttttcgaattttgcagaacctggtggttacgttgctcgtgaaggtgaccctgtagatggcctttacatcatattggatgggcaggtatgaattggagtatattatttctttgcttagcatttattggcttttatgattaccatactttgggaacaaatatgcaagctgtcatttagccagttgtcagccggattcattgactagtactgtttgtggctgttccaactaccacgctggaacaattgatgaattgttctttaaaaaaatattcggtcatattttgcagcaatgatcatttatgctgggacttggggtgaaggatcagtttgtactttgtagtttcacactttcagagtatcattgttgtcctgatagccagttcctttgctcctgccataactgaatgatataatccaactgttctactctcatgtttttttttgttattatcatagtttatatgatcagttacattatccttgtgatctactgatgaagcagaggccatggaattctcagtattaattctccatctgcattatattgcaggctgaggtttcagctcctgcaaacacagaagaagaaaaccgccctgactatgtgttaaataagtatgactactttggttatggtaagaactatcattacatgacttctgatttttatagtagttcctttttttttatcaagtatataaaccattttttataagatacggagcagctctgtttgcgtactattctaatattctgcattgttttgtaggaaccaatagttctgtgcatcaagtaaatgttattgcagtatcaaaggttccttgttcatgtttctatttttaataacagtataagctgatggtgtccctactgtaataataaatatcttctggcttcagcttattgttagtatcctattttgcagctgacctgcttcgtattgccaaatcaatatggacacttgttgcaaccaaagaccatttggagtgcagaagagacacctgagaaccattctttgctagaacaaattttgcacttagagccattggaggtaagtctaaatgtgttgtgatgtttctgttttgtaaaggtatatatcactttacagtatgattactgtgctgaaaaattatcaggtatcctagttcgtaagatcttatgacttatatactacatacgctaattttgtagctctaccattctttttaccaccaacagcgtgttaagtatcacccattagaggttaacctgatttagattattaatagatcaggctttcatttacatcatctaaaagagacaatttaaggtggatttgcagtttcatatttacacctcctatttataagtggaaagggcaaaatattttgtcacagcaagtcaaatttaagtctgtaaactttctcactgtaatcattatcttttttaggtcgatatcttccgtgggtttactttgccaggagctccgacttttaggcaagtttttggaggacagttgataggacaggcatgttccaactaaaatatcttactttctattatcaatatctgctggatgtttgtatttcaccacttcctttttctgttatgttgcaacattcatatttaagtagaagtgcatgaatccatttgtgaaaaataaaagataaaaaagggagcttctttaacatgcttctgaatcatttttttgctgctttttggaaaacttttggactttcctcgttgatcacagagggccagtttttgtaatagcatggatgtaagtgccaaaggaggaaaaaacattgtaaaggcggttcacataggacagcattattttgctcaaacatgttttcttcaatggtatattaatcttctgattaaattgttaaattgtttgtccatgaaaattgtttttccactactcattctcatgcactcccaaaagaaagttcaaacactagaaagagtacacacatccatgtcaaagattttcactatgtctgaactttgtttgttattggaccctcatgtaggcactagcagcagcatccaagaccgttgactgcctaaaagcggtgcacagtttgcacgcaattttccttatcgcaggagacaagaattgtaagttctctaagcttgtgtagtagttctcttctcaatcaagttgaatttaaactactccaacaaaaaatgcaattttgggaaccactagtctatcatatcacgaagaggtgacctaagaagaaaccaatgccaacaaaatgtaactttgataaccactagtctattagatcaagaaaggatggtttaagacaaagctttactctgccttccaaattatgcattgtccctgacttagaaatgagcagtggattaatttgtgcaaacttttttatgagtctatcttttgagctgtcatcttagtaagctgcaaataattatgcagtgtaattttatttatttgaaaaaaagaataaatctgatcatgtctgtttctgttttgtcctctgttgtagtgccaataatatatcaggttcatcgggcgcgcgatggaacaagctttgccaccagaaaagtggaggcaaagcaaaagggccttgtcattttcaccttgattgcttcattccaggtgtttatccttctggtacccagttttgtgaacaatgtacagcctcaggaaaattttggcatattagtattgatcaagcatttgattctctcgatggcttccattttgggcctgtttggttctcttccattgctagccttgccaattttttggcaatggcaagatttggcaagccaaaaaaattggtggaggtggctgttttgagtgataccaaaatttttagactaggctagtgcttaagttaaccaaaccaaaaaaaattggcaatgacaaatttgtggcttcattcctacaaaccaaatgagcgacatttttgtagcagtgcattatttggtaaggttgggtttggcaaagaagcaaacaagctcaactccctcccatcataaatatttggtgtttaggacaagaattattaaaacttttgaaacttcgaccatgaatagcttctcaaatgcttagtttaaaaacaaaaaatgggtatagacagatttatttttaaaaataatatcttaatatcatgaacttactagatttggtaagcctattctaatataaaactgatagttaaagttttaaatgtttgacaatcttgtcctaaacgtcaaatatttatgaccatagggagtaaaattttaactacacttttaacaatatattacagtaaaggtagtggtcaaaactgtgttgtggagaccacatcattgtttataaactttttttgtgactagagggaccagtagaatgttctttttgcaatattcaatattcatactgaacgctgtcaacgataacgaactgtttgaactcttgttaaatcctgaggaaatgtgtattttcatgtttatactactttatacattaagccaaaaggttcgtgagactaaatctgccagcagaagaatagatggtatctaacttctgcatgatcaattatgttgcagaaagacgaattagggtttgagcatcaagctgcaatcatgcctgatgttcctcctccagaagaggtaattttttttcctttcctgtaatgtatatgggaaagaagaattgataattaataggtaatcaaatgcagctcctgaatctggaagagatacgggaaagaagacttactgatcctcgcttcccaatgtaattttcatgacttccaaccatatatttgatgatgatagtttcctagctaatgcagtt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