Difference between revisions of "Os04g0559400"
(Created page with "{{JaponicaGene|
GeneName = Os04g0559400|
Description = Similar to Branched-chain-amino-acid aminotransferase 5, chloroplast precursor (EC 2.6.1.42) (Atbcat-5)|
Version = NM...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os04g0559400| | GeneName = Os04g0559400| | ||
Revision as of 19:57, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os04g0559400 |
|---|---|
| Description |
Similar to Branched-chain-amino-acid aminotransferase 5, chloroplast precursor (EC 2.6.1.42) (Atbcat-5) |
| Version |
NM_001060075.1 GI:115459879 GeneID:4336645 |
| Length |
3926 bp |
| Definition |
Oryza sativa Japonica Group Os04g0559400, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 4:28425091..28429016 |
| Sequence Coding Region |
28425447..28425564,28425987..28426099,28426421..28426516,28426874..28426990,28427183..28427281 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008397:28425091..28429016 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008397:28425091..28429016 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggagctcctcccgcgtgtgggtgtggccgcccccggtcccggacgcggcggcgcgtcgccgtccccgacgcgccgtcatcgcgcgccctctcaccccattctgaagcgatcggcggcggtttgcggcgcagtcgccgtctgcagaggaggggctgtcgccaggaggagccggtggtcaactctggtgaccgcagcatattacacaggaactgctgaactggtcgactttaactgggaaactcttgggtttcaacccgtgccgactgactttatgtatgtgatgagatgttccgaggaaggggtgttcaccaagggtgaattggtgccatatgggccaatagaactgaacccagcagctggagtgttgaattatggtcagggtttacttgaaggtctgcgagcacatagaaaagaggatggatcagtccttctatttcgtcctgatgaaaatgctttacggatgagagtaggcgcagaccggttatgtatgcctgcaccaagtgtagagcagttcctagaagctataaagctaacaattttagcaaacaagcgctgggtaccccctactggcaaaggttctttatatatcagaccgctgctgattggaagtggggctatcctcggtgttgcaccagccccagagtacacatttgttgtctttgcttgcccagttgggcactattttaaggatggcttatctccaatcagcttgttaaccgaggaagaatatcagtgtgcggcaccaggtggaactggtgatataaagactatcggaaattatgcttcagccgtttatgctaaagaaagagctaaggagagaggtcattctgatgttctttacttggatccagtgcataaaaagtttgttgaggaactttcgtcctgtaatatattcatggtgaaggacaacattatttctactccactattaacgggaacagttcttcctggcatcacaagaagaagtataattgaatacgcccgtagccttggatttcaggttgaagagtgtcttattacaatagatgagttgcttgacgctgatgaagttttctgtactggaacttctgtggtactatcctctgttggttgcatagtgtaccaggggagaagagtggagtatgggaaccagaagttcagaactgtgtctcagcaactctattcagcacttacggctatccagaaaggcctcgtggaggacagtatgggatggactgtgcaactgaattag</cdnaseq> |
| Protein Sequence |
<aaseq>MELLPRVGVAAPGPGRGGASPSPTRRHRAPSHPILKRSAAVCGA VAVCRGGAVARRSRWSTLVTAAYYTGTAELVDFNWETLGFQPVPTDFMYVMRCSEEGV FTKGELVPYGPIELNPAAGVLNYGQGLLEGLRAHRKEDGSVLLFRPDENALRMRVGAD RLCMPAPSVEQFLEAIKLTILANKRWVPPTGKGSLYIRPLLIGSGAILGVAPAPEYTF VVFACPVGHYFKDGLSPISLLTEEEYQCAAPGGTGDIKTIGNYASAVYAKERAKERGH SDVLYLDPVHKKFVEELSSCNIFMVKDNIISTPLLTGTVLPGITRRSIIEYARSLGFQ VEECLITIDELLDADEVFCTGTSVVLSSVGCIVYQGRRVEYGNQKFRTVSQQLYSALT AIQKGLVEDSMGWTVQLN</aaseq> |
| Gene Sequence |
<dnaseqindica>3453..3570#2918..3030#2501..2596#2027..2143#1736..1834#1523..1654#1266..1442#953..1130#417..520#197..295#aatggcaacccaagccgccggctcggtcggtcgccccgccggcgttcctcctccccaccagctcagccctcagccaccaaccacgcgcgcgcgccgccgtctcgtctccggtcccctcggcgcgcgaccacccaaccacctcgaccctcggcggcgcgcaagggcggcggcggcggcggcaggcggctgaccgcgaatggagctcctcccgcgtgtgggtgtggccgcccccggtcccggacgcggcggcgcgtcgccgtccccgacgcgccgtcatcgcgcgccctctcaccccgtgagcacctcttccgcgagagcgcgagattgatcggtggatgatgctaggggctacagtcagcgggagtggaagggcacggtgtgttcgatacggtgctaatggttgacgctgcctgcagattctgaagcgatcggcggcggtttgcggcgcagtcgccgtctgcagaggaggggctgtcgccaggaggagccggtggtcaactctggtgaccgcagcatattagtaagcatgacaaactgagttctatcacggtttaccttttttttttcgctgtactgttacagtcttagtggttagaacaggaaaaaggtttcaaatcctgtagaaggatattgattcacactgtgcttgtcctgctactcaagacaagattaggcgagacttatatgcgggttaacgaaaagaggctgttgaatccagtccactattagcttgatggaacatttaggatttgacagtccatctattcaggtgcgctccgattagcattcgggtgtcccattgacatgtgggcggaaaaagaggaatcataacggctaaacaattgtagcaaacagtttctgaacttgttgtcctttgcctgacccatcatcacattacgggcagtgcctgtttttgttggattatctgttcattgtgagcttcatgcttcagcacaggaactgctgaactggtcgactttaactgggaaactcttgggtttcaacccgtgccgactgactttatgtatgtgatgagatgttccgaggaaggggtgttcaccaagggtgaattggtgccatatgggccaatagaactgaacccagcagctggagtgttgaattatggtcaggttagttgagctcttaattctaccttgaagaatcactatctgattgttgagcagagctgtactaaatgagccttgtccatttattctgctccattttgtttgaaaagctctaatgcacttgtaaaatttctatagggtttacttgaaggtctgcgagcacatagaaaagaggatggatcagtccttctatttcgtcctgatgaaaatgctttacggatgagagtaggcgcagaccggttatgtatgcctgcaccaagtgtagagcagttcctagaagctataaagctaacaattttagcaaacaagcgctgggtaaggacattttgtttcttcaacagtgataggcgccgtggtgcgcacatctttctcatgagctatgcgctccgttgcaggtaccccctactggcaaaggttctttatatatcagaccgctgctgattggaagtggggctatcctcggtgttgcaccagccccagagtacacatttgttgtctttgcttgcccagttgggcactattttaaggttggcagcgttgacttaactttcctgcatattcattttatctggttatagttgcaagattactgtcttgtttacattcaggatggcttatctccaatcagcttgttaaccgaggaagaatatcagtgtgcggcaccaggtggaactggtgatataaagactatcggaaattatgcttcagtaattaccttttcttttctacaagctgagtctctactttatcatctgattcctcatagaggacacagtacactattccatatctttactctacgggcatggttctcccaatttgagtttggctgccaatgtatatttttatgtctgaaatcaaattcttgttcttcattttcatttgacatctgtatacaggccgtttatgctaaagaaagagctaaggagagaggtcattctgatgttctttacttggatccagtgcataaaaagtttgttgaggaactttcgtcctgtaatatattcatggtgaaggtatgtgtacatatgtactggatttgttcaaattgacttcctttgcaagtctatctaggaaaataccagtgtaaagcagttccaagtatagctcaatgatgtctcttgcaatgatgttgtaacttgtcagcatactttttggatttcgttgaacgggctgaataattttatggcacataaattatcatttgatagacatggcattagcttatcttcaaacttgttaggagtagcaaggaatgatgtgttaagttcagaatcctccaaattatcagatgctacattgtcagataatttttatattactatattttgttctgagagctaaacaatgtagcattgcctttttgctggcaggacaacattatttctactccactattaacgggaacagttcttcctggcatcacaagaagaagtataattgaatacgcccgtagccttggatttcaggtaacctaaacatgaatgcccatcctctgctaacactgcctctgtaaccatggttcagaatatttgtatcttggaagttggaacattctgcacaccaccttttctttccatattggccaaaatattcagacttgtttgaaatttttgaaacttcgttcagaattcaaatgtgttttgaaagatcttgatgagatctcagaaggtcctgaaattttttgagatctcgagggtcctgaattttattgaaactcaagcatggaaactggtgtcaacaatatgagatatgaacccaatcttgttcgctgatatattttttttcaggttgaagagtgtcttattacaatagatgagttgcttgacgctgatgaagttttctgtactggaacttctgtggtactatcctctgttggttgcatagtgtaccaggggagaaggtaagtacttcagtaattcacaacctcagcctttgaagatattctagctggaatctttgagatgttgaattaatcataagagcttgtgaagctagtagacattccatacagtgaaaatgtacacctgtagtactatcaacagagtacaatgtcgtctcataaaaggaaaaaaaaagagtaaagtaaccggtagcatatttcatggggactgtgttagtataccagtttcactaaatggaaaaacttagcatatgtatccaccaaattattctcctatttttctttatcagtgatccatgtcatacaaattctgcaaatacgaacaaatgcagcattgagaaagggctcctccgttctattaaataattgttactctatattaaaaaaaaaatcagttctcatgcatccgctatccattacagagtggagtatgggaaccagaagttcagaactgtgtctcagcaactctattcagcacttacggctatccagaaaggcctcgtggaggacagtatgggatggactgtgcaactgaattagtagcctggtcgttatggacggtcttaaggttcttcctgtcaaatagtgctttcttgtttgaagcagcaataaagaaattcaccgaattttctcatttcaggcagtatagaatagagaatcacctcttgtgcatatgcaggtacacacagtatacaaataatctggggcccagagatagagaagcatgaactgtttcttctgactctattacctttcttactgaccatacttccagtgtaaataagtgctccttgcttatccgaggccatattccgtgcatcaattcggcccataactttgtcgtcagcttgtctcatgtgtattcaggacaaaattattggcactatttattggac</dnaseqindica> |
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