Difference between revisions of "Os04g0561700"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os04g0561700| Description = Conserved hypothetical protein| Version = NM_001060089.2 GI:297603165 GeneID:4336659| Length = 4656 bp| Definition ...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os04g0561700|
 
GeneName = Os04g0561700|

Revision as of 19:57, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os04g0561700

Description

Conserved hypothetical protein

Version

NM_001060089.2 GI:297603165 GeneID:4336659

Length

4656 bp

Definition

Oryza sativa Japonica Group Os04g0561700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:28516498..28521153

Sequence Coding Region

28516825..28516903,28517081..28517136,28517379..28517439,28517518..28517591,28518093..28518173
,28518355..28518429,28518504..28518623,28518714..28518794,28518872..28518940
,28519285..28519356,28519448..28519590,28519680..28519794,28519879..28520002
,28520352..28520554

Expression

GEO Profiles:Os04g0561700

Genome Context

<gbrowseImage1> name=NC_008397:28516498..28521153 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:28516498..28521153 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ggcgtactgctctatttgctttggagtgttactgcccacctgctatcagatgatggtgtagaaccactccgtagtgtttctcctatcgataatgttacttcaattatatctgaagcagtccagagagagggtcaccaagtcgatgagttctccctagaaatttcactgcctgcagttatagcagctaatgatcgtgccattaggttatatatgaaagagaaatatggcagtgcaaattggttcgatgaaaaaatattttctcaacagacaatgtcagtgaaggaggccttgagaatattgctagtaccgtcagtagaaaaacaaatgaatgtgaaacatggtaataattcatttcgaattcgcttaacttatactcatgatgaaggttcacaaaagcttctaaggcttctgccaaatgaccgtggtcgtaaaagaaaaacagaatcaagagatggaagcagtaaaaggggctcaacagatgatgataaacaaatattaagtgaatcagatgcattcatcaacaagaaccttgaaggcattcaagatcaagacttccgtagtttatttcaattgccacctgaaaaggtgttagaaccctgccatcttgtgatatcttgccaacggtcacccatatatattggtggaagatacttgaagctttcaaggaatgtcagccagtcatgttggataattgatgatgagagaatgggggaagcatcagttgaggagataattggggagaatgtccgtgccatctgcaaaggtgatggctataagttccatgctgctggaagagaagatattgatgttcggatgcttggatctggtcgtccattcttagttgaagtcttgaatgtgcgatctattccatctgctactgaagttcaacaaatagcagataagattaatgactctgaaaagaaacatgtcagggttagaaatctcaagctggtaggcagtgaaatatggacaatgatgcgggaaggagaagcagagaagcagaagcagtatgctgccctcatatggacgtctcgccctctgacggatgatgacctacataatatttctcttatcaaagatatggaaattgtacaaaagacgccaataagagtcttacatcgtagaagtccattagagagaaaacggattatacactggatggagattgcaaaaatttctggcgggtcaaactattacctgttgcatctatgcactcaagctgggacatacataaaggagtttgtgcacggagatcttggacgcacacacccaagtgttggcgtcatgttaagctgcagagctgagatactgcaactcgatgtcactgacgttaagatggacttcctgcagtaa</cdnaseq>

Protein Sequence

<aaseq>GVLLYLLWSVTAHLLSDDGVEPLRSVSPIDNVTSIISEAVQREG HQVDEFSLEISLPAVIAANDRAIRLYMKEKYGSANWFDEKIFSQQTMSVKEALRILLV PSVEKQMNVKHGNNSFRIRLTYTHDEGSQKLLRLLPNDRGRKRKTESRDGSSKRGSTD DDKQILSESDAFINKNLEGIQDQDFRSLFQLPPEKVLEPCHLVISCQRSPIYIGGRYL KLSRNVSQSCWIIDDERMGEASVEEIIGENVRAICKGDGYKFHAAGREDIDVRMLGSG RPFLVEVLNVRSIPSATEVQQIADKINDSEKKHVRVRNLKLVGSEIWTMMREGEAEKQ KQYAALIWTSRPLTDDDLHNISLIKDMEIVQKTPIRVLHRRSPLERKRIIHWMEIAKI SGGSNYYLLHLCTQAGTYIKEFVHGDLGRTHPSVGVMLSCRAEILQLDVTDVKMDFLQ </aaseq>

Gene Sequence

<dnaseqindica>4251..4329#4018..4073#3715..3775#3563..3636#2981..3061#2725..2799#2531..2650#2360..2440#2214..2282#1798..1869#1564..1706#1360..1474#1152..1275#600..802#ggaggtctctctctccataggactagtctgaactagaggggattaactagggtttaatcaaccgcgtcgaggaccatggcggccgcagcggaggtggatgcggaggcgaggagcatcctcgaacgcgcagcggcgtcctccttcccaccgctccacgccatccaccacctcctctccgtcggggttcgtcttctcagtcatgccctctgctgcacacttttcactatccaatccatgttcaacttcccccaattccgatttcacctattacggaaatatttttggatagcgtactgggtgttacgtattgttcgtgtattactacgattatgttgtgggatccatttcctcccctttactgaatgaacatttcgatgccatgctgaacccaatgatttttcagtttcacacacggagaaatttgtcaacatttttgcacaatatttgcaggtctgtgtgcggtgcatctttcggttctttggagcctttagttatgcagcaccatgcctttctcttacggcatcagttctgcattcgtttcttgaagagcatgacgattccgcaaaaagtgggtcttgttcatgtttgtcaaaagatgaggcgtactgctctatttgctttggagtgttactgcccacctgctatcagatgatggtgtagaaccactccgtagtgtttctcctatcgataatgttacttcaattatatctgaagcagtccagagagagggtcaccaagtcgatgagttctccctagaaatttcactgcctgcagttatagcagctaatgatcgtgccattaggtaaccatctgcacctaagaatttttgcctcacttttttatacagcaccatgaattggtttgtgactgaagggggtgccacatattaatcatttttaaaagctaaaattatgtaagtggtgatatataatgcaaccatttgtaagtgaaaggtatttacatttttttaattagcaaaaaattcagagaaatgaagtatattcagtcttgatggataataattatacttcaacaatttactgtgtttgttctcaaccacagatggaactttctgttgtgtgcttatattaaatctatgatgacactgcactggcattttcataacgtgctggcatttgtgtctttaataggttatatatgaaagagaaatatggcagtgcaaattggttcgatgaaaaaatattttctcaacagacaatgtcagtgaaggaggccttgagaatattgctagtaccgtcagtagaaaaacaaatggtaaatgcctttttctgataatatctcctgaaatcaagcattgcttgtttacttatctcaaaccggttgactaatttcgtgcagaatgtgaaacatggtaataattcatttcgaattcgcttaacttatactcatgatgaaggttcacaaaagcttctaaggcttctgccaaatgaccgtggtcgtaaaagaaaaacaggtatagaaattaatgaagaaagactgcattgttgatggccggtcatttttccacattttattttattgttttgtctgatgtctcaacagaatcaagagatggaagcagtaaaaggggctcaacagatgatgataaacaaatattaagtgaatcagatgcattcatcaacaagaaccttgaaggcattcaagatcaagacttccgtagtttatttcaattgccacctgaaaaggtgccaaatgttctatcattgtgccaatttggtcaagaaatcagacatatatattactgattttggttcacttatttatatctcccttcaggtgttagaaccctgccatcttgtgatatcttgccaacggtcacccatatatattggtggaagatacttgaaggtatgctccatgaatacttggtcttaacttgcataattcatcagtatgtcagcaacactacagtaatcctttttgtagttgctaatctcctaattacgtacttggaacaactatgtagttctgtataatcataggacaaccttaagttaggcaacagaaaaatatttttgttgcagcagtgtcttctgtaatggattattaccattaggaatgccacttggaagtgtttcctcatactcagtgcatagaagcaaactaaaggtttctttgcatgtttgcactttaattgatgctgtgctattcaactgagttgtttccctcatgacaacgttcctcattatcagctttcaaggaatgtcagccagtcatgttggataattgatgatgagagaatgggggaagcatcagttgaggtaagacacaataccttatatgctgtctcaacccaagaaataaaagtacaactgaacatccccatacccctttgtaggagataattggggagaatgtccgtgccatctgcaaaggtgatggctataagttccatgctgctggaagagaagatattgatgtaatcccatggttttgagttgtgtcttttgctatttttttcatcagagtatctgttgttatttctatgctgaatgaaccatatatgcaggttcggatgcttggatctggtcgtccattcttagttgaagtcttgaatgtgcgatctattccatctgctactgaagttcaacaaatagcagataagattaatgactctgaaaagaaacatgtaagaacacagtaaagggtatcaacatcgcacttggattagatatgatgtgcttatgcttcagcattttataggtcagggttagaaatctcaagctggtaggcagtgaaatatggacaatgatgcgggaaggagaagcagagaagcaggtactctaccactgatgatatatcactttactgaaacgatagcatcaaagtttgttattgtatttaacatgatatgtttcatacttattgcattgttgtctgaagccataaataactttgttgccgaaaggtgataaccttttgctgattgtcagtgcttaattctactatacgtgtgcagaagcagtatgctgccctcatatggacgtctcgccctctgacggatgatgacctacataatatttctcttatcaaagatatggtataacatattttctttctactaaagacctgcagagtgttgttttgacttttgatcatgttctttggttgttttttttttcattttcttttcacacctagcaacgtgctgccatatcccataagattgtcctgatctaataaattagaaccagaacacgggttgtgcagaataagtctacaacagtagaaaaatactgtatgggcgatcacaggaaataatggatgatttcttgtaaattttaaactgccagtggccattacagtcataacctttggcctcaaatgtttatccagtaagaccttctctgccttaatgtccacatgctgtttccgaataaatctgagtcttatatgtatcatgcttatttgtgactaatatatttcatatttggaaagaataggtttggatcttagctaaggtcattgattttctattttctttgttgttctaaggtatttggatactatgtgaacatagtaactcttgcttgctgtgtaggaaattgtacaaaagacgccaataagagtcttacatcgtagaagtccattagagagaaaacggattatacactggtgagttgagactgatttcagctttgtcaaatccattttatgttccataaatctgagaaacagaaaaccatctgtcaggatggagattgcaaaaatttctggcgggtcaaactattacctgttgcatctatgcactcaagtaagcattgcaattttatccttcccgtcagttctatcttttgtgattgcctgggttattatttttcgctgaatgaatgtggtcttcttcactgtatattatggttttgtatgtcagatcaacttgtaaaaatattgcaattcttaaatgcttttgtgaatccgtcataaggcaattcatcaaaagcatttatattctgtagtttgctccctccggtttaatcaaccttggtgtccatacaggctgggacatacataaaggagtttgtgcacggagatcttggacgcacacacccaaggttcgtttcaaaaaaaaacctagcctgaattttcaattcctcatattttcttatctaagcccttttaaccgaccttttaaattcataatatgttcatggccttgctgctcttgctgtattggcgccatgttcctttaaatcatatcatatatattaacgaccttgctgctcttgcagtgttggcgtcatgttaagctgcagagctgagatactgcaactcgatgtcactgacgttaagatggacttcctgcagtaatatgctattgtcatattgtatcatgctcagttcgtatcattggttattggtgttgtacactatctgtactgatgaaatgcgcagcctgcagaagaccacaaggcaagttcagaaaatatgtcattttactatagtataaccttctgatgagaggctatttgagaaattgagctcagtctgctccaatgtcaacttacagctatgtattatgagccacagttttgccaaaaaaaacatcatgcttatactggcttagggcctgtttaggaagcttatagctgctccaatgttaacttacagctatatattatgagccacagttttgcc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0561700, RefSeq:Os04g0561700