Difference between revisions of "Os04g0595300"

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(Created page with "{{JaponicaGene| GeneName = Os04g0595300| Description = Zinc finger, RanBP2-type domain containing protein| Version = NM_001060268.1 GI:115460265 GeneID:4336848| Length = 7...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os04g0595300|
 
GeneName = Os04g0595300|

Revision as of 19:58, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os04g0595300

Description

Zinc finger, RanBP2-type domain containing protein

Version

NM_001060268.1 GI:115460265 GeneID:4336848

Length

7982 bp

Definition

Oryza sativa Japonica Group Os04g0595300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:30483988..30491969

Sequence Coding Region

30484213..30484347,30484434..30484565,30484638..30484877,30485146..30485314,30485608..30486107
,30486195..30486305,30486416..30486622,30486695..30486747,30487217..30487351
,30487453..30487602,30488423..30488561

Expression

GEO Profiles:Os04g0595300

Genome Context

<gbrowseImage1> name=NC_008397:30483988..30491969 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:30483988..30491969 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccacgcaaggttgtctctgggcctgactacgatgacgagtacgacgatgactatgatgagtatgatgaggactacgatgattacggtgagaccgggcacagtgacgacattcagcaccccgtgaaggaggagaaagagtcatcgaagaagtcctcaagtacggtgcctgtgctttggagatgctccatgtgcatgttcgataatcatgaaagcatggtgtattgtgagatgtgtggggtttttcgagaatcctttatgaaatctgccaaggatggttcaataaaagtccatgggataccaagtgattttgggacaccttcgatgccgaaatctgactgtaccaagatgccagtgaatactcgtactacagactttgatggtgaccctgagataaagaatgctagcatatctcatgagaaagttggttccacgcagtacacatctgctggtagctcatcaggcgctgggaaaaagctgaaggaggaccagagtagtagggctagcagttctgcgcagaatgaggatgtggcccagaaactttcttctgacatacagaagctaggtttagaaaagaatgaagtagatactgcaaaaccttatttacctgaagaatataagcctgagaagtggatgttcgctaatgaggaatcaggagtgctgagccaactaaaccttgcaatagtaggtcatgttgattctggcaagtcaacactctctgggagactgctacatctgttaggaaggatatcgaaaaaagatatgcacaagaatgagaaggaggctaaagaaaaaggaaaaggatcatttgcttatgcgtgggctatggatgaaagcagtgaagaaagagaaagaggcgtgacaatgactgtggccgtggcttatttggagactaagaagtaccgtgtagttttgcttgactctccaggccataaagattttgtaccaaatatgatatctggcgcaacgcaagctgatgcagctattcttgttgttgatgcttgcactggttcatttgaagctggcatggacggtgaaggagggaaaagtgttggccagacaaaagaacatgctcagcttattagaagcttcggcgttgaacagcttattgttgcggtcaacaagatggatgccatcggctactcgaaagaaagatttgagttcatcaaggttcaacttggtagttttctgcggtcatgcaatttcaaagattcatctgttacctggattcctcttagtgctgttgaaaatcagaatttgatcaaaattccttctgatgtccgtttaacttcctggtatcaaggattttgtctcttggatgctatagattccttgcagcttccatctcgggatgtttcaaagcccctcattcttcctatctgtgatgttatcaagtctcagtcaacagggcagtttgcagcctttggaaaattagagactggagctattcgaattggttcaaaggttttaatttcaccttgtggggaagtggcggcagtgaaatccatcgagcgggattcaaattcatgtgacatagcaagagctggtgataatgtagcggttagtttacagggtatcgatgggagtaagctaatactaggtgggattctttgcaaccctggtttcccagtgcctgtctctaacttcttggagctaagggttctagtgttagacgtcaccattcctatccttattggctatcaggtcgaatttcacatacatcatgtgaaggaggctgcgagggttacgaaaatcgtggcattgcttgacaaggctggcaaaccaagcaaaactgcacctcgttttcttaagtcaaagcagaatgcagttgtgcaggttaccttagacgctccggtctgtgttcaagaattctccaaatgccgagctcttggcagggcattcttaaggtcttctggaagcacgatcgctgttggagtcgtaacgcgggtactccggcaagatcagaactga</cdnaseq>

Protein Sequence

<aaseq>MPRKVVSGPDYDDEYDDDYDEYDEDYDDYGETGHSDDIQHPVKE EKESSKKSSSTVPVLWRCSMCMFDNHESMVYCEMCGVFRESFMKSAKDGSIKVHGIPS DFGTPSMPKSDCTKMPVNTRTTDFDGDPEIKNASISHEKVGSTQYTSAGSSSGAGKKL KEDQSSRASSSAQNEDVAQKLSSDIQKLGLEKNEVDTAKPYLPEEYKPEKWMFANEES GVLSQLNLAIVGHVDSGKSTLSGRLLHLLGRISKKDMHKNEKEAKEKGKGSFAYAWAM DESSEERERGVTMTVAVAYLETKKYRVVLLDSPGHKDFVPNMISGATQADAAILVVDA CTGSFEAGMDGEGGKSVGQTKEHAQLIRSFGVEQLIVAVNKMDAIGYSKERFEFIKVQ LGSFLRSCNFKDSSVTWIPLSAVENQNLIKIPSDVRLTSWYQGFCLLDAIDSLQLPSR DVSKPLILPICDVIKSQSTGQFAAFGKLETGAIRIGSKVLISPCGEVAAVKSIERDSN SCDIARAGDNVAVSLQGIDGSKLILGGILCNPGFPVPVSNFLELRVLVLDVTIPILIG YQVEFHIHHVKEAARVTKIVALLDKAGKPSKTAPRFLKSKQNAVVQVTLDAPVCVQEF SKCRALGRAFLRSSGSTIAVGVVTRVLRQDQN</aaseq>

Gene Sequence

<dnaseqindica>7623..7757#7405..7536#7093..7332#6656..6824#5863..6362#5665..5775#5348..5554#5223..5275#4619..4753#4368..4517#3409..3547#tcttctcctccctcacgctctctcccaggccgcgccatcaacgccgccgcgctcccccgctccggtcgccggactccaactccggtaaccctccagtacccgctgccgccgcgaatcggttcccctggctcccacgagcctgctcctgctaaccctagccatccgcctcctgctgctgcagcccccatggagatggccggtggaaaacacagcacaactggtggctgcaccctatccccattggtgaacaccccagtgtccaattcttcctctcattcttcctctctcttctgctcctctgatatgatatttgtgctctcctgtgtggtgtgtgtggtaatatactgtggattatggtgtatgggtgatgtttgtgaatttttcctaaataactctcgtgatggtgatatactcatgactgcccttgctggctcttcttgactaattgttttactatggctaaatgatgcctagatgctatgaatggataaaatacccacatacacaagcatacgcttttgcaatataagattaaaaatagaaatcacattatcaggagtggtccttatatatgcttgtattcaatggtgattaaaatattgaaatctgctatatgctaatatgttagcaggatcagctcccctatgctactattcagagcataatacaggaattcaatattaattcctacatgcatgatgcagtatggtagtatgacaaaagtgatcaaatgacctatgaacaatgaatattgatctatatgacaaagtatactgattactaaaagctctgataagtaattttgtgttttatggtattgatcatagcaaggttatattaccaactcctacggttctgattttgatataattctcttctaggtgacttgctgtagaggcccataggtttcggtttatggatttgcattcaaaactaaaaatatacatgtacacctgctaaccatattaatcctatagattcaatattacttattttaagaactccattcgcatgatgattcttgctacagctaattaacataatttggctgataatgcgatgctactatttcttactgcttactaattgataaatgatttatctacaattgaattatcctaattgacagaattgctatagttgtcctccttcatgataacttaaatctatgctagggttcagatactaatttccaagtccatggctaaatctaaaatctgattttatctatatgtcgaaaaaaatcaatatttgtactatggacaaaaatctgcagttagtaaacttgataaagacataagattgatgatatctttatatacattctactgtttcttgatttatcacctgaacacttgtttatctatagtaaaattttagttacacatatataactatactatccagattcttatgatcaaagccaggttcttgcatcaataaagcatcaataatcccatgcatgtactgaaccctgatttcttctattagctacatgatgacataattaatctcagccagaatttatcttctacttgacatttagatgaaaatatttatatcatattagttacacattctgttttgaagctcaaactatttaatatgaatattttactgaatctaagatgctctggttcatcttctaatggatgcaaatgcaacacccaagtcctacgcatactaatatatgcatcacacaagaatcatgccatgatatgattttagttctattctaatctgcagattacctggttaatgactctagtataattatgaaggttgtatgattttctcttctctggtttctacagatactccccctggactccggttcaaggattctcctattggaactctagcttctccccttgcagttgatgtaccaactcagctcctcctcctggagctgaaacccctctcctcttgaagctcaggtacctcctgcttgattgaaaccctgacctgctactgaattatttggtttcttgttccttgctggttttgcctcctaatccaatttacaacagtttccttttctctttcttgatttgaagattcttgcttctcctggatctcaagcatctcctactcatctactttgatttgtctatatgatttcctggccatggtcgctatggttgctctgattgttttgtactaaactaatgaactacaacagcaactatctctctctctctctgagtcaccctagtctcctctgctgctcactctaggctgctacggctgtggtgttgcatgactgaggtgtttactattgatatgctacctatgattatttctctgtcttcagctgagtctctagccgaattgctggctactactgcttgattctgtggttgattgttcttgcgactgaggagtattttactatggctgctgcttgagattggtttccaaccgatgtaaccaagactggttctctagtagctgggttgatatatgggataatttttttcttttgtgactcacctgcttgcatgccggttggataagggcttgctgccacctcaacaaagctggtttggtgtgataatctcaagctatatttacgatcaatagaaattttgtaaagcctgacatgtttagtgcttttgcacttgagtcccacaagtttagtaaaatttaagactactacgaatttagggactgatatgcaattgccctagaactcaagagtttttctgaaaaataaataattattgaatctttgactgagatggttcagtttatgatatgatatctataatcaccatgtatatgcacaatatatagaatgcatactgtataaaatttctagtgtacaattatatgcatgtatgtatgcagacctgtagtggtaaactgtaaataaagaactgtgatttctactgtgcatatgtgtacctcgcttcgtgacgactaatctacactatagtttaaccaaaactaaattatcccactcctcaccaggtttagtctaaataagaataaatcaatgatgcatatggatatgactaaataaataaatgacaaggaaacaatcgagaaaccatttaatatccagaataaaacaacaatcaatatatttataggtcctagccagcatcgtggctcaatcaacaccgctctcagccagtgtgaccaagtcattagcatgactaagactatagctaaatactcgggatgttacacccgcctccggtgagcacccgtgccgacgcacatcctctttctttgccatccctcccgttctacccacaccctttttctctcgaatttgcctcaaccttatcttctcttctagatctggaagctaggttttctctttgcctttttattaaccttttagttttactaataacactaatttttgttccccattaggtacgccgctgtgtcagcaggatgccacgcaaggttgtctctgggcctgactacgatgacgagtacgacgatgactatgatgagtatgatgaggactacgatgattacggtgagaccgggcacagtgacgacattcagcaccccgtgaaggaggagaaaggtattatgtcgaaggtttgaagctagtactagacagtgtacacctcagcttgtaagaatggtgaaatagctattagagtcgcttcatgatgcacacttaacatatctactcgtgtaggttagttacggcggtgtaggttacaaggagcgttcacccggttatcataatttgctcagtggtgttaaatgttgttaatgacattacattgtttccatcctgcattcgtacttgctatcgcatcctctattgcctgaatatgcaaataagaacacggtatgcttaattactctaaaacttccaatagcattgcttgttcaaacaaatgcagtgatcgtgtagcttatgtctgccgattacctggccttgctctaatttccttgcccatttatcccatcatatgcacttcagatatttgttgtctcgaaggcattgttattcaacatgcattttttggaatgagtcaaatatcattcatccagttagtccatcaaaataaaaacttactgcaaatcaaatctacccaaattgggtgagaatcgaaacatagctggctgccagttagaactaccagggttacctactggttgcttactgaatcctggtgcatatgcatattattgttctatatatttgaggccttttgaaataattcatatgcctatacatttaaccgttgctttcctcataagctccatgcactgaatgcttcactttgttgttgtacagtgagttttttttgtgatttattcagcatatcaagctaactgcgcctagtacagctccttgatctctaatattatgtcaccactctattgtgcagagtcatcgaagaagtcctcaagtacggtgcctgtgctttggagatgctccatgtgcatgttcgataatcatgaaagcatggtgtattgtgagatgtgtggggtttttcgagaatcctttatgaaatctgccaaggatggttcaataaaaggtaacatgcttcacccattctaattttctttgaatcacaatttgtattccaacaaggaattctaatgtaatcatagtgtacttataactattaaattacagtccatgggataccaagtgattttgggacaccttcgatgccgaaatctgactgtaccaagatgccagtgaatactcgtactacagactttgatggtgaccctgagataaagaatgctagcatatctcatgagaaaggtactgctggtgcaaatggtagatgctttacaattttgtgtatgcaactctgttctacctttaaactagcttctccttctataacaccttattgagttatgaaaaggataattcattattcaccatataaaagaagcacattagatcatcttatgtgcgggaagcagattttgatccttttctttcccaagcaccattgttacttagtgtggctgaacagattgttcccttgcataccacttaaaaatgtttcacctgttgggcaacaacaacccacagctcacgtgtcatgcactccaaagactgaaccaagctacttttgtaagggtgacttatttgtactcgatttgcagatcttcccaaccagttgtatcatctgttggttgataagccttcctgttgaaaaaaaaatcctgttagctgtgttttttattgtcaccttaatttaaattattttattattcaacagttggttccacgcagtacacatctgctggtagctcatcaggcgctgggaaaaaggtgaaacacattgcacttcctgaagatgtgcctgtcgagaggacagctcaattgatttctgatcattttcagctgaaggaggaccagagtagtagggctagcagttctgcgcagaatgaggatgtggcccagaaactttcttctgacatacagaagctaggtttagaaaagaatgaagtagatactgcaaaaccttatttacctgaagaatataagcctgagaagtggatgttcgctaatgaggaatcaggagtgctgagccaactaaaccttgcaatagtatgctatactcatcttctgttctgaatatggcatatgttccttaacaattttgttattctaaaagtgctttgtctaaataggttactgtctacgaacaatttgtttaggtaggtcatgttgattctggcaagtcaacactctctgggagactgctacatctgttaggaaggatatcgaaaaaagatatgcacaagaatgagaaggaggctaaagaaaaagtaagtttattattgttgttattgtactctacttgatcctgatgttccattcatattctttgtattatggaaattattttttaccagggaaaaggatcatttgcttatgcgtgggctatggatgaaagcagtgaagaaagagaaagaggcgtgacaatgactgtggccgtggcttatttggagactaagaagtaccgtgtagttttgcttgactctccaggccataaagattttgtaccaaatatgatatctggcgcaacgcaagctgatgcagctattcttgttgttgatgcttgcactggttcatttgaagctggcatggacggtgaaggagggaaaagtgttggccagacaaaagaacatgctcagcttattagaagcttcggcgttgaacagcttattgttgcggtcaacaagatggatgccatcggctactcgaaagaaagatttgagttcatcaaggttcaacttggtagttttctgcggtcatgcaatttcaaagattcatctgttacctggattcctcttagtgctgttgaaaatcagaatttgatcaaaattccttctgatgtccgtttaacttcctggtaagttatgttttgacacactacttccatgccattcggaacactacatcgtgtagaatttttcaacagaggtggctgtttcatgcatcttgcaatttctaaccttttcacatggtaatatcgacatatcgtagtaagcacccatttgggtcaaatcagatagtttggatgatttgaacatatatgagaatagcattactgatcttttgaaatatttgggaccataccgtcttctcagaataaaaaaaatcatatatctgaacaacaggaatcttgaactgatgtcctttcaggtatcaaggattttgtctcttggatgctatagattccttgcagcttccatctcgggatgtttcaaagcccctcattcttcctatctgtgatgttatcaagtctcagtcaacagggcagtttgcagcctttggaaaattagagactggagctattcgaattggttcaaaggtacattcctcacaaatcagcagggactgttgatacttgtatatttaactgagatcagctccaaatatgaggatagaggaaagattgataaatagcgtttacattgtgacatttgccagttgcatatttgcatgccaatctttcagtaacagcatggtgtcggaatttggtcttttttcaaaaaaaatatatttatacttgcttttgtacacaaatatttgtcttgacatttctatctgttctgacagcttggaacttgctgttgcaggttttaatttcaccttgtggggaagtggcggcagtgaaatccatcgagcgggattcaaattcatgtgacatagcaagagctggtgataatgtagcggttagtttacagggtatcgatgggagtaagctaatactaggtgggattctttgcaaccctggtttcccagtgcctgtctctaacttcttggagctaagggttctagtgttagacgtcaccattcctatccttattggctatcaggtaaagatatgaccaaaagctctctttgattattttcttccctgatgcaatctgataataatacgggcctaggtcgaatttcacatacatcatgtgaaggaggctgcgagggttacgaaaatcgtggcattgcttgacaaggctggcaaaccaagcaaaactgcacctcgttttcttaagtcaaagcagaatgcagttgtgcaggtaacaactgatcacagatccttgtgaggagccattgcttacgaagtcatcatctgcgatgttttgattttcttgatatttgtcaggttaccttagacgctccggtctgtgttcaagaattctccaaatgccgagctcttggcagggcattcttaaggtcttctggaagcacgatcgctgttggagtcgtaacgcgggtactccggcaagatcagaactgaaagacctccgcccaacatctgaaaatttgaacgtatctgcagccgtgctttggggcccatattgtagctgactcaaaacggtactgtagtattgtcgatcagaagtttggcgacggcatttttcactgtgtggtcgtcgccatttccatcgtgcatttcagaatttgcgttgagatatggcctgtaaaatagtcactttcacgagttctaacccccagttttgtg</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0595300, RefSeq:Os04g0595300