Difference between revisions of "Os04g0613800"

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(Created page with "{{JaponicaGene| GeneName = Os04g0613800| Description = Methyl-CpG binding domain containing protein| Version = NM_001060393.1 GI:115460515 GeneID:4336978| Length = 4491 bp...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os04g0613800|
 
GeneName = Os04g0613800|

Revision as of 19:59, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os04g0613800

Description

Methyl-CpG binding domain containing protein

Version

NM_001060393.1 GI:115460515 GeneID:4336978

Length

4491 bp

Definition

Oryza sativa Japonica Group Os04g0613800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:31518005..31522495

Sequence Coding Region

31518418..31519278,31519671..31519820,31520806..31520910,31521023..31521091

Expression

GEO Profiles:Os04g0613800

Genome Context

<gbrowseImage1> name=NC_008397:31518005..31522495 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:31518005..31522495 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggattccaacgagggctctcatcgtataacacgaagtgggattgttagggcaaaacctgctgtcacggccgatggtaagattgagcctgctggggaggggttacctcatggatggttgaaagaatacaggcctcggaagaaccaatctgggtctagagtcaagggtgatacgttctatattgatccaaccaatatgtatgaatttcgttctcaaaaggatgttcaacggtatcttgaatctggagatgttactaattgtgtaatgatacaaaataagaggaaaatggaagacctgcacactgcaagaaaccaatctcatcatacacgaagaccatctgatcacagacaacttgatgctggtgaaggggctactcaatgtgatctaccaatagcaagaggtaatagtgcacggagtgattttttggtaaatgcaaacagttcagacaattctgaagatatgtcatcatcagtgcccaagggtgtgtccgaagggaaacttacacggttaaagcttcagaaggcaagggttccgaatcaatccgtggagcatgaatcttccacaggagaagtagcaaatatggagcataagcccaaggaaaagaaacagaaaactaaacctgtcaaacagatctctacacctcttcgagcgtcacctcgtttagctgcgctgaagattaaccaagaaggcaataatgagcccaaagatgaagctctcagcacaaacacagacactgctaatcagtcacaaccaaagttgaccaaaagtcctaaagcaaaggctaattcctctgtacttcctgagaagagtgatggagcacatacttcaaatgcttctgaaattcctcaaaacaagtatccatcagctaccgagcaaatgcaaggatcatctgttcatcctcaacaggctggaacagctgatgctatgcctgggtccgccctttcatcgttattgcgaagtatctggtcagatccatgcctcaagtttgcgatcaagactcttgcaggtgacatccctgctctagacttcattccatcacaggacatgaacaaagggacgacaccgaattgttcctcttctgcttatgatggtagtagaaaccatgcgcaagtcgaccatgtcggcatgccaatgccaaggccatcagataagttctacggcagtggctggtttcctccccagtga</cdnaseq>

Protein Sequence

<aaseq>MDSNEGSHRITRSGIVRAKPAVTADGKIEPAGEGLPHGWLKEYR PRKNQSGSRVKGDTFYIDPTNMYEFRSQKDVQRYLESGDVTNCVMIQNKRKMEDLHTA RNQSHHTRRPSDHRQLDAGEGATQCDLPIARGNSARSDFLVNANSSDNSEDMSSSVPK GVSEGKLTRLKLQKARVPNQSVEHESSTGEVANMEHKPKEKKQKTKPVKQISTPLRAS PRLAALKINQEGNNEPKDEALSTNTDTANQSQPKLTKSPKAKANSSVLPEKSDGAHTS NASEIPQNKYPSATEQMQGSSVHPQQAGTADAMPGSALSSLLRSIWSDPCLKFAIKTL AGDIPALDFIPSQDMNKGTTPNCSSSAYDGSRNHAQVDHVGMPMPRPSDKFYGSGWFP PQ</aaseq>

Gene Sequence

<dnaseqindica>3218..4078#2676..2825#1586..1690#1405..1473#aagcaaagaaagagatagagatagaagactctgtgtagtgtagtgtgagagagagtgagagagagagagaaagaaaaagctctccctagtccctagtgcgtggaggagtagaggtagagcaaaccactgaaccacatcgccttctttctactggtttctaccgtgttcttgctgctgctgctgttcttcgtgagcctcctcgacgacctcgatctgcttgtttcttcccggctccatggcggcagcggccgggccgtagtggtgagttcttgctcggcttcttgcctattactaacgacgactactttttcttgtgcggttggttcaattgatcctgagctctaatcagtttgagttggttattggtggataatagtttgttctagctgaaattttttacgattaacggggagttctgtgggtttcttggaggtttagttgcatgttcgtggtgaatcaacagtaactgctgctagcatggagcttgatatgcttcttgcttttggatctattctgcaaaagtagcttttttttgtgactgtaatatgtgatcgagttcagtgaattgggtaagttattacctcaagactattttttttctacttgaattttttggttttctacgcttcatgatagcgtgatttcattttaaaaggttggagggatgaggaaaaaacctttttttgtgggaaaatgaaagagttcaatactagtaatttcataaatagttgctaggtctttacactgttaaaaggtttgtgggttaaattcgttcttttgagtgattctaaccctataagcttgttcttgctctatgaaactcggtagctgacctcaagcaagttttttttaattgaaatggaataattagtcatatctaagttttgctttgacaaaaaatataaataaaagctcgtcctaggattatgtgtaccgtatacccgcaaagctctaagttttgcccatcttagtagctggagtaattgagattggataagtttccctggattattttgagcccacttgtttgtttgaaccacgagtccacgatgtacatattatgtaatgactctctgtagtgcaccggcaaccttatgcctctgggtttctctgcagaagacttgaggcattgtatttcaataaagtcccccaatcttaatgaaattaggtcacccaatcttttgtccgacccggcaatgtatttcaacgaagtacagctcgattgcttccatttttccttcaataaactccacctttttcacatattagaataaacttcacaagaacgcatacttatagtcagttacaaaaacatatgtactgtatatttaatatctatatgacttaggaagttccatataaacaggattttgtggatttcattatcaaaacgggaaatagactatggattccaacgagggctctcatcgtataacacgaagtgggattgttagggcaaaacctgctgtcacggtatggaaggttttgaccttttttgtttaaatgtctttccattttagttcatttctgtaacaatttatttttgacaactttgtttacttcctactgctttcttactccttaggccgatggtaagattgagcctgctggggaggggttacctcatggatggttgaaagaatacaggcctcggaagaaccaatctgggtctagagtcaagggtgatacggtaagtgtagttccttttgattaaatcatgaaaataccaaacttgatcctttttttaatacgttatgtttcaaaattagtcatgcacatttttggtgtccttctgaactctgatgtctcttccacaagcaagccaaggataatccttgaaagaacaagtggctgctaatgattagatgcaaagcaaccccttgacttctcatctgcattagaatttatgcagtttcatttagtggagtctagaccacttacctttctttcccagaagcaatttatcaaatactctgatgatatatagttggattgcattgctgtttgccagctgtcaacatccgcaatgtgatggagcaagttaatgaacaacctttctgcaacacaattctaatatcaggacatgttcgagtaaatttctgtggaaccaaggacttttctttagctcttttcaattaactaaacatagcagtattttctgtgatactccgtgtgtcttctgtttggttaacaactgcctacgttacagtattatggagaaattactcgttagtgaatctttttcctttgtttatgcaaacatttagcataagaatgtgaagagttaatgcatggtaatgatcaacttgcagttcaccaatgttttctgcaataaaaataattagtcagttttgcacagaatatttttgttcaaccttgaaattatgacagtatgaatatgaagaatgagagctgctaacttcacaccttggttttagcctcacactaaaataattttggcgtgttctaacaagttagtagtgaatgtattctgttgataacaaattgattacaacttttcttgagttgttttcttacaataccttttaagctctcgttttatgccataagatggtctacttgaacctattatttgcttgacatcattttgtttactttatgttttaaccttttgttctgtagttttaactggtatgtccatcttatcactgcagttctatattgatccaaccaatatgtatgaatttcgttctcaaaaggatgttcaacggtatcttgaatctggagatgttactaattgtgtaatgatacaaaataagaggaaaatggaagacctgcacactgcaagaaaccaatctcatcatgtatgctccttttctattctagtggtatatctaatttgtaatatgtctatatgtttacaaaaaatctagtgccaggctgccagctacattattcaagagagagagtttttcagtagtactaagtccatgtatgaatctaaatataaacagtgttgttccttataaacagtgaaaataactatatttcactaaaactttgaagtataaaagagaataatactaaatcattctgtcaactataatgctaaatcaacaccatgtgatttctgctgtattaatgtattgtacgtgagtgaattggatgggtttttgcttgttacatttgttttccttgtttctttttctgtttgattactgtccccatcttataatcattgtttcattaaattcagacacgaagaccatctgatcacagacaacttgatgctggtgaaggggctactcaatgtgatctaccaatagcaagaggtaatagtgcacggagtgattttttggtaaatgcaaacagttcagacaattctgaagatatgtcatcatcagtgcccaagggtgtgtccgaagggaaacttacacggttaaagcttcagaaggcaagggttccgaatcaatccgtggagcatgaatcttccacaggagaagtagcaaatatggagcataagcccaaggaaaagaaacagaaaactaaacctgtcaaacagatctctacacctcttcgagcgtcacctcgtttagctgcgctgaagattaaccaagaaggcaataatgagcccaaagatgaagctctcagcacaaacacagacactgctaatcagtcacaaccaaagttgaccaaaagtcctaaagcaaaggctaattcctctgtacttcctgagaagagtgatggagcacatacttcaaatgcttctgaaattcctcaaaacaagtatccatcagctaccgagcaaatgcaaggatcatctgttcatcctcaacaggctggaacagctgatgctatgcctgggtccgccctttcatcgttattgcgaagtatctggtcagatccatgcctcaagtttgcgatcaagactcttgcaggtgacatccctgctctagacttcattccatcacaggacatgaacaaagggacgacaccgaattgttcctcttctgcttatgatggtagtagaaaccatgcgcaagtcgaccatgtcggcatgccaatgccaaggccatcagataagttctacggcagtggctggtttcctccccagtgagttccatctggggaatatgtggcaaatcttctcacctgcaaaagcaaatcagaagaaagccaaagactaaccagcctcacaggcttcttagaactcctcattaggtaccttgacaaggatgcatgttgcaagaaagactgtatcttgttggaactgtagtagatggttcgtcactaataagtaataataacctaataatatacccccatcttatgctaaactggacactattttctgtctgtctgaatttgtgtagtaacctgactactaattcatttgtttgtatcattagtgcagactagagatgctgattgtatgcagatgcctgtgccagattgtcatgctcagggtcactgctctgccagcacaaagacccttcatgtgtattactactacatgtaataatagcttag</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0613800, RefSeq:Os04g0613800