Difference between revisions of "Os04g0630400"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os04g0630400| Description = NAD-dependent epimerase/dehydratase family protein| Version = NM_001060509.1 GI:115460747 GeneID:4337097| Length = 1...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os04g0630400|
 
GeneName = Os04g0630400|

Revision as of 20:00, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os04g0630400

Description

NAD-dependent epimerase/dehydratase family protein

Version

NM_001060509.1 GI:115460747 GeneID:4337097

Length

1976 bp

Definition

Oryza sativa Japonica Group Os04g0630400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:32462294..32464269

Sequence Coding Region

32462459..32462582,32462773..32462948,32463032..32463241,32463339..32463498,32463612..32463831
,32463907..32464057

Expression

GEO Profiles:Os04g0630400

Genome Context

<gbrowseImage1> name=NC_008397:32462294..32464269 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:32462294..32464269 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcgtcggaggttgagaggaagacggtgtgcgtcaccggcggcaacgggtacgttgcttcattgctcgtcaagatgctcctggagaaaggatacgctgttcagacaagcgtcagagatcccaataacccggagaaggtctcccatttcaaggacatggaaaaactcggccccctgaaggtctttcgcgccaacttggaggatgaaggcagcttcgacgaggccgtcgccggctgccactacgccttcctcgtcgccgctccggtgtacgacaagagccacaagtccgacgatctcgagaaagagatagtccaaggcggcgtcgagggcacactgaacgtgatgaggtcgtgcgcgagagccggcacggtgaagcgcgtgatcctgacgtcgtcgacggccgccgtctccagcctgcggccgctggaaggcgccggccatgtcctcgacgagtcgtcctggtccgacatcgagtacctcagatccatggagaagctgtcgccgacgcaggcgtactcgatctccaaggttctttcggagaaggaggcgaccaagttcgcggaggagaacggtctcagcctggtgaccctctgcccggtcgtcgccgtcggagcatcgccggcggtgagggtcgataccagcgtcccggcctgcctctcgttgataaccggcgacgaggagatgatgaacatcctcaagggcatcgagaaggcgtccgggtggtcgatgccgatggtccacatcgaggacgtgtgccgcgccgagatcttcgtcgccgaggaggagtcggcgtcggggaggtacatctgcggcagcctcaacaccacggtcaccgagatcgccggcttcctggcggccaagtacccccagtacaacgtcagatgcgattgcatcgaagagcatcaccccgagaagccgaccatctcgctctcgtcggcgaagctcatcggcgaagggttcgagttcaagtacaagaacctggacgagatgtacgacgacctcgtcgcgtacggcaaggccctggggttgatccccaactga</cdnaseq>

Protein Sequence

<aaseq>MSSEVERKTVCVTGGNGYVASLLVKMLLEKGYAVQTSVRDPNNP EKVSHFKDMEKLGPLKVFRANLEDEGSFDEAVAGCHYAFLVAAPVYDKSHKSDDLEKE IVQGGVEGTLNVMRSCARAGTVKRVILTSSTAAVSSLRPLEGAGHVLDESSWSDIEYL RSMEKLSPTQAYSISKVLSEKEATKFAEENGLSLVTLCPVVAVGASPAVRVDTSVPAC LSLITGDEEMMNILKGIEKASGWSMPMVHIEDVCRAEIFVAEEESASGRYICGSLNTT VTEIAGFLAAKYPQYNVRCDCIEEHHPEKPTISLSSAKLIGEGFEFKYKNLDEMYDDL VAYGKALGLIPN</aaseq>

Gene Sequence

<dnaseqindica>166..289#480..655#739..948#1046..1205#1319..1538#1614..1764#atgttcctgctctccgggatttgtcctggcaagtgccacaacagcgcaatcagcaaaagaaacctcatcatcagtgtgctgctcggattctacctgggagtaaacccaagtcaccttctctgtcacaggagaggtattaactgaccggagagagagagagagacgatgtcgtcggaggttgagaggaagacggtgtgcgtcaccggcggcaacgggtacgttgcttcattgctcgtcaagatgctcctggagaaaggatacgctgttcagacaagcgtcagagatcccagtgagattctactccctttctttcttgttacatgtttttccagtgttcagttttaactgaaaatcgaagaacatgtcatcagttcataatttgtttcagaggagtatttgcacgttcagttttgggattgattgtgtcagtacaattttggtttggcctctgaaactgcttttgtaactctgaatttcagataacccggagaaggtctcccatttcaaggacatggaaaaactcggccccctgaaggtctttcgcgccaacttggaggatgaaggcagcttcgacgaggccgtcgccggctgccactacgccttcctcgtcgccgctccggtgtacgacaagagccacaagtccgacgatctcgaggtgaccactgctgcaacctgcaagctcgattagtatctgtagtcagttagttagttactgaattctgaacttggccatggcagaaagagatagtccaaggcggcgtcgagggcacactgaacgtgatgaggtcgtgcgcgagagccggcacggtgaagcgcgtgatcctgacgtcgtcgacggccgccgtctccagcctgcggccgctggaaggcgccggccatgtcctcgacgagtcgtcctggtccgacatcgagtacctcagatccatggagaagctgtcgccgacgcaggtacacatatatacacacgagctgttccatgtcactgaaccacagcaatgtctcgtagaacatgagttcggcgccattgttgctgcatgcactgcaggcgtactcgatctccaaggttctttcggagaaggaggcgaccaagttcgcggaggagaacggtctcagcctggtgaccctctgcccggtcgtcgccgtcggagcatcgccggcggtgagggtcgataccagcgtcccggcctgcctctcgttgataaccggtgaggaactatctagcgatcaccgaatgaatgaaacaagaagcaatccaagaactcgacttctgaacgtttttgggtcgctgcatcgatgatctgtgaattttttttttcaggcgacgaggagatgatgaacatcctcaagggcatcgagaaggcgtccgggtggtcgatgccgatggtccacatcgaggacgtgtgccgcgccgagatcttcgtcgccgaggaggagtcggcgtcggggaggtacatctgcggcagcctcaacaccacggtcaccgagatcgccggcttcctggcggccaagtacccccagtacaacgtcagatgcgattggtaattaagaaattaagctttatgcattcgtgcatttggttatctgaatctgatcatgcgttgctatgtacgcagcatcgaagagcatcaccccgagaagccgaccatctcgctctcgtcggcgaagctcatcggcgaagggttcgagttcaagtacaagaacctggacgagatgtacgacgacctcgtcgcgtacggcaaggccctggggttgatccccaactgatggtgatgatgggcggcgtaattccactgctttggcgattacgaccaaacgtgtgttgctttcaaaaatactattgtgtctagcattctattgctacattgctagtagtactagtaccaagttccaatacatttggcggtttggctgtacttcgttctgttcatgtaagaggaggattgagaatttgagatcctcttagggggtaagctgtc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0630400, RefSeq:Os04g0630400