Difference between revisions of "Os04g0674600"

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(Created page with "{{JaponicaGene| GeneName = Os04g0674600| Description = Oligopeptide transporter OPT superfamily protein| Version = NM_001060776.1 GI:115461281 GeneID:4337382| Length = 374...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os04g0674600|
 
GeneName = Os04g0674600|

Revision as of 20:01, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os04g0674600

Description

Oligopeptide transporter OPT superfamily protein

Version

NM_001060776.1 GI:115461281 GeneID:4337382

Length

3743 bp

Definition

Oryza sativa Japonica Group Os04g0674600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:34840200..34843942

Sequence Coding Region

34840441..34841556,34841628..34841817,34842064..34842198,34842305..34842402,34842523..34842686
,34843518..34843941

Expression

GEO Profiles:Os04g0674600

Genome Context

<gbrowseImage1> name=NC_008397:34840200..34843942 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:34840200..34843942 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>cctccacacctcgcaaccgcgatcgatcgagagagagagcgagagcgagagctcaattcgcgggccatggcgaggagcgggagggagcgtagagatcaggaggaggaggcggcggtggtgtcggtggagcgggtgttcgaggggagggtggtgccggggtggaaggagcaggtgacgctgcgggcgctggcggtgagcgcgctgctgggcgccatgttcagcgtgatcgtgatgaagctgaacctgacgacggggatcatcccctcgctcaacgtctccgcggggctcctcggcttcttcctcctcacgtcgtggaccaagctcctcgacaaggccggcgtcgccagcgtccgccccttcacccgccaggagaacaccgtcgtccagacctgcgtcgtcgcctgctccggcatcgccttcagcgggggttttggcagctacatattcgcgatgagcgacaggatcagcgaccagtcaggcgaggccagggacgagcacaacatcaagaaccccagcttgggctggatgattggattcctcttcattgtcagcttcctgggcctcttctcagttgtgccactcaggaagataatgatcatcgattacaagctcatatacccgagtggcactgcaaccgcacatctcatcaacagcttccacactccccagggtgcaaagcttgccaagatgcaggtcaaaatgctgggcaaattcttcgtgatgagcttctcctggggcttcttccagtggttctacaccggcggcgacggttgcgggttcatgtcgttcccgacgctgggtctcgaggcctacagaaacaagttcttcttcgatttctctgcgacgtacgtcggcgtcgggatgatctgcccttacctcgtcaacatctccgtgctcctcggaggcgtcatgtcgtggggaatcatgtggcctctcatcgagcacaagaagggtgactggtatcctgctgacctcaaacccagcagcctccgcggcatcgtcggctaccgggtgttcatctccatttcactcatcctcggcgacgggctgtacaactttctgaaggtgatgacaagaaccacaacggcgctggtgatgcaggtgcgcgcgatgatgtctgagccgacgctgccggtctccggcggcggcgggcagacgccggaggagacgttcgacgacaagcggcggacggagctgttcctcaaggaccagatcccgaactggctggcgctgagcgcgtacgtggtgatcgcggtggtgtcgatcgcgacggtgccccgcatcttccaccagctgaggtggtaccacgtcgcggtgtcgtacgtggtggcgccggtgctggcgttctgcaacgcgtacgggtgcgggctgacggactggtcgctggcgacgacgtacggcaagctggccatcttcacggtgggggcgtgggcggacgcgtcggacggcggcatcatcgcggggctggcggcgtgcggcgtgatgatcgggatcgtgtcgacggcgtcggacctgacgcaggacttcaagaccgggtacatgacgctggcgtcgccgcggtccatgttcgtgagccaggtgatcggcaccgccatggggtgcgtgatcgcgccgtcggtgttctggctcttctacaaggcgttccacgacatcgggatgccggggtcggagtacccgtcgccgaacgcgctggtgtaccggaacatggccatcctcggggtgcagggcctcggctcgctgcccaagcactgcctcgacctctgcatcggcttcttcgtcgccgccatcgccgtcaacctcgccagggacctcgcggcgcccaaggtggcgaggttcctcccgctgccgatggccatggcgatccccttctacctcggcccctacttcggcatcgacatgtgcatcggcagcctcatccgcttcgtctgggaccgcctcgacggcgccagggccaaggcgttcgctccccccgtcgcgtcgggcctcatctgcggcgacggcatctggacgctgccgcagtcggtgctcgccctcgccggtgtcaagcctcccatctgcatgaaattcctctcccggaccaccaacatcaaggtcgacgcgttcatcgccaagctcccctcctcctag</cdnaseq>

Protein Sequence

<aaseq>PPHLATAIDRERERERELNSRAMARSGRERRDQEEEAAVVSVER VFEGRVVPGWKEQVTLRALAVSALLGAMFSVIVMKLNLTTGIIPSLNVSAGLLGFFLL TSWTKLLDKAGVASVRPFTRQENTVVQTCVVACSGIAFSGGFGSYIFAMSDRISDQSG EARDEHNIKNPSLGWMIGFLFIVSFLGLFSVVPLRKIMIIDYKLIYPSGTATAHLINS FHTPQGAKLAKMQVKMLGKFFVMSFSWGFFQWFYTGGDGCGFMSFPTLGLEAYRNKFF FDFSATYVGVGMICPYLVNISVLLGGVMSWGIMWPLIEHKKGDWYPADLKPSSLRGIV GYRVFISISLILGDGLYNFLKVMTRTTTALVMQVRAMMSEPTLPVSGGGGQTPEETFD DKRRTELFLKDQIPNWLALSAYVVIAVVSIATVPRIFHQLRWYHVAVSYVVAPVLAFC NAYGCGLTDWSLATTYGKLAIFTVGAWADASDGGIIAGLAACGVMIGIVSTASDLTQD FKTGYMTLASPRSMFVSQVIGTAMGCVIAPSVFWLFYKAFHDIGMPGSEYPSPNALVY RNMAILGVQGLGSLPKHCLDLCIGFFVAAIAVNLARDLAAPKVARFLPLPMAMAIPFY LGPYFGIDMCIGSLIRFVWDRLDGARAKAFAPPVASGLICGDGIWTLPQSVLALAGVK PPICMKFLSRTTNIKVDAFIAKLPSS</aaseq>

Gene Sequence

<dnaseqindica>2387..3502#2126..2315#1745..1879#1541..1638#1257..1420#2..425#gcctccacacctcgcaaccgcgatcgatcgagagagagagcgagagcgagagctcaattcgcgggccatggcgaggagcgggagggagcgtagagatcaggaggaggaggcggcggtggtgtcggtggagcgggtgttcgaggggagggtggtgccggggtggaaggagcaggtgacgctgcgggcgctggcggtgagcgcgctgctgggcgccatgttcagcgtgatcgtgatgaagctgaacctgacgacggggatcatcccctcgctcaacgtctccgcggggctcctcggcttcttcctcctcacgtcgtggaccaagctcctcgacaaggccggcgtcgccagcgtccgccccttcacccgccaggagaacaccgtcgtccagacctgcgtcgtcgcctgctccggcatcgccttcagcggtacggtttccccgctgccattcttcgcactcgccgcggatcggatcgctcgctcgctgcacgattcagtgattgcgcgatgcaaattttgcgtcgaatcgaatggcgacggatcacttgtttgggccgtaaattaggcctcgatggcctcctttttggatgtatatcaaggcccacaggccacaattccatttcggtgtgtagcatgaattttgatcttaggttttttctggattctttttcttgttctgtgcttgcctttcttaaagttcaggtgtttgaatttccaaccaaaatgatgtttttagcacaccattggaaactggcctattgagcatacttcctccgtctaaaaaaagactaatgtccagattcattatattacgaaatgtcttatctaatattaggttgttttttggtgggacgaagggagtacacaacataggtgtacttctaattgccacgtaggacaaatacggtgcttagcaaaaaaaaatgattgctgcatttaaatacagaggataatgtagccaactagccatggcccatgggaaagcacctacaaagaaatgatttgattggagactcattcctcgtgttgtttcccctagcacttggtaatttgcatccttactaacaaaaaaaaacttatctttctttaagcaccttgttactataagcatacatgttccgttcttcacgtcctagacttttatcactgctctccctgttatcagtagtacatccacagagagcactgtgcactacgttctctgcttggtgtcagggtggtgatggtttcagatgctgatctatgcactggtggtacagggggttttggcagctacatattcgcgatgagcgacaggatcagcgaccagtcaggcgaggccagggacgagcacaacatcaagaaccccagcttgggctggatgattggattcctcttcattgtcagcttcctgggcctcttctcagttgtgccactcaggaaggtacttagtacatttcatcagctcagctgttacagtttctcctaaaattcagagatatatgatttctttgaaggacatagttaaattaattgaaccatgatgttaatttttctctgtcagataatgatcatcgattacaagctcatatacccgagtggcactgcaaccgcacatctcatcaacagcttccacactccccagggtgcaaagcttgccaagtacggtttttttttcagataagaaagtttgctaaagatatgtacatgtggtgaatacagagaacaaataagactcttgtctgaattctgaatcattttcctgcaggatgcaggtcaaaatgctgggcaaattcttcgtgatgagcttctcctggggcttcttccagtggttctacaccggcggcgacggttgcgggttcatgtcgttcccgacgctgggtctcgaggcctacagaaacaagtattgtctttgtttttttatacacgacgtcgttaatatttcgtataatacattatttaaaaatataagttaaagttacatttctttgatgataaaacaagtaataataaaataaacaataataatacaagtattttgaataaaagaaatagacaaatgtcatgctagcttgaaacatacagatgctcgccacactggacagtcaacaacagttaactgaattcttcagttggtttcttgctgcaggttcttcttcgatttctctgcgacgtacgtcggcgtcgggatgatctgcccttacctcgtcaacatctccgtgctcctcggaggcgtcatgtcgtggggaatcatgtggcctctcatcgagcacaagaagggtgactggtatcctgctgacctcaaacccagcagcctccgcggcatcgtcggctaccgggtagaacgagcttcttgcaaatgatcatctgttgcatgatcaatggagtaattgtgattcgatcgatgcaggtgttcatctccatttcactcatcctcggcgacgggctgtacaactttctgaaggtgatgacaagaaccacaacggcgctggtgatgcaggtgcgcgcgatgatgtctgagccgacgctgccggtctccggcggcggcgggcagacgccggaggagacgttcgacgacaagcggcggacggagctgttcctcaaggaccagatcccgaactggctggcgctgagcgcgtacgtggtgatcgcggtggtgtcgatcgcgacggtgccccgcatcttccaccagctgaggtggtaccacgtcgcggtgtcgtacgtggtggcgccggtgctggcgttctgcaacgcgtacgggtgcgggctgacggactggtcgctggcgacgacgtacggcaagctggccatcttcacggtgggggcgtgggcggacgcgtcggacggcggcatcatcgcggggctggcggcgtgcggcgtgatgatcgggatcgtgtcgacggcgtcggacctgacgcaggacttcaagaccgggtacatgacgctggcgtcgccgcggtccatgttcgtgagccaggtgatcggcaccgccatggggtgcgtgatcgcgccgtcggtgttctggctcttctacaaggcgttccacgacatcgggatgccggggtcggagtacccgtcgccgaacgcgctggtgtaccggaacatggccatcctcggggtgcagggcctcggctcgctgcccaagcactgcctcgacctctgcatcggcttcttcgtcgccgccatcgccgtcaacctcgccagggacctcgcggcgcccaaggtggcgaggttcctcccgctgccgatggccatggcgatccccttctacctcggcccctacttcggcatcgacatgtgcatcggcagcctcatccgcttcgtctgggaccgcctcgacggcgccagggccaaggcgttcgctccccccgtcgcgtcgggcctcatctgcggcgacggcatctggacgctgccgcagtcggtgctcgccctcgccggtgtcaagcctcccatctgcatgaaattcctctcccggaccaccaacatcaaggtcgacgcgttcatcgccaagctcccctcctcctagctaccatgcagctgatcgacgagctagccatctatctagctagctcatgaccactcactcaaccatgacaacttcatatatagctagcagtagcacatacattaatgtcgtagcctccttgtgtcttgcttccttttagaatcagatgcctttgctagtagcccgcatgcatgcatgtgacacatataaatagctactaggaaccgagcagcaatgcaagtactacattatttggactgtc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0674600, RefSeq:Os04g0674600