Difference between revisions of "Os04g0676600"

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(Created page with "{{JaponicaGene| GeneName = Os04g0676600| Description = Similar to Transcription factor (Fragment)| Version = NM_001060792.1 GI:115461313 GeneID:4337398| Length = 5535 bp| ...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os04g0676600|
 
GeneName = Os04g0676600|

Revision as of 20:01, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os04g0676600

Description

Similar to Transcription factor (Fragment)

Version

NM_001060792.1 GI:115461313 GeneID:4337398

Length

5535 bp

Definition

Oryza sativa Japonica Group Os04g0676600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:34941138..34946672

Sequence Coding Region

34941327..34941455,34941637..34941713,34941790..34941836,34942596..34942696,34942846..34942935
,34943379..34943495,34943567..34943724,34944294..34944575,34945099..34945399

Expression

GEO Profiles:Os04g0676600

Genome Context

<gbrowseImage1> name=NC_008397:34941138..34946672 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:34941138..34946672 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgacacgagaggctccacttcctctggcggcggcgatgacaggggcagagaaggccacgatgacttcacagggggcggccaatacaacaggtaccataggatccttgaggccgtgccgtcaccccttgttaggcgtgagaatggtgtgcatcatcagtaccccactggcctaatccaccacccgtcgtcgacaatgccggtggcgccatgctcctacgtgccccggtacaccatggtgccaacatccgccatgctcccgctgcagcaccaccaccgccaattgcagatatctcaagaaaacttccaagaccgagttccctccaataatgttgcagctccgcatcttcctagcaattttcaggatttgaggccaatgtgcaatgggccgccattcatgtcttatggccagactgcttccaatagaaatgttctttatcagaatctgacgccatactccttcaatgcatgggctagcaataacatgccgaggaaccctgtctacactagttaccaccctactgcaattgaggatccccatgctactccattccacatcaacaatcatgacacagaccaaggtttcttcaccgtttctactagcttcagggtggatcaatcatttgtacatgctccttcaccctttccaccagtgtcttcatcatcccgcagtttctcttcagctcaaatttcaaatggaccgatagacgctaagaaagccaagaaatcagatataaaagatcaaccaattgttttaagaagaagtgatacggagagtgaaaaaaatgatgaactagatcaaactccggctagtgagccttcaagcatgagtcataacagtgcaaattcgactattagattcaactgtagagaataccgtgttatcttgcgcaaggagttgacaaatagtgatgttggtaatattggaagaattgtgatgccaaagagggatgcagaggctcatcttccagcattgcatcaaagggaaggtgtgatgctgaaaatggatgacttcaagcttgaaactacttggaattttaagtacaggttctggcccaacaacaagagcagaatgtatgtcttggaaagcacgggtggctttgtgaagcagcatgttctccagacaggggacatattcatcatctacaaaagctcggagtctgagaaattagttgttcgtggggagaaggccattaagccgaatgtcatcatgcctattgtggactgcagctgcaaaaatgatctcaacaacagcgaagaatgcgggttcgctatcagcctgctgactaagaaaacctga</cdnaseq>

Protein Sequence

<aaseq>MADTRGSTSSGGGDDRGREGHDDFTGGGQYNRYHRILEAVPSPL VRRENGVHHQYPTGLIHHPSSTMPVAPCSYVPRYTMVPTSAMLPLQHHHRQLQISQEN FQDRVPSNNVAAPHLPSNFQDLRPMCNGPPFMSYGQTASNRNVLYQNLTPYSFNAWAS NNMPRNPVYTSYHPTAIEDPHATPFHINNHDTDQGFFTVSTSFRVDQSFVHAPSPFPP VSSSSRSFSSAQISNGPIDAKKAKKSDIKDQPIVLRRSDTESEKNDELDQTPASEPSS MSHNSANSTIRFNCREYRVILRKELTNSDVGNIGRIVMPKRDAEAHLPALHQREGVML KMDDFKLETTWNFKYRFWPNNKSRMYVLESTGGFVKQHVLQTGDIFIIYKSSESEKLV VRGEKAIKPNVIMPIVDCSCKNDLNNSEECGFAISLLTKKT</aaseq>

Gene Sequence

<dnaseqindica>5218..5346#4960..5036#4837..4883#3977..4077#3738..3827#3178..3294#2949..3106#2098..2379#1274..1574#cgctgctccctattccccattccccccacgcgacagtggagacgacaagtgaagcgatcgccacaagccgccatccgcagcgccgactccgacgccggacgccgggcgccgcgtcggcgccgagacgctcacgccggccggccatcacggtatagccaccaccgtgtccggcatccggccaggcggcgcaggcggcaggggaaggcaatgctctatatactttctctccatttctttcttatattttaatcagtgtaaaacagtagtaggatttgctgcgttctctgtgactgtgattatattaacggcgattgttttcttcagatttcagaaagcctgagtttggttggtattgttgcgcgaagataaacaggaaagaaagtgagatcagggaacaagtgtctaaggagaaagtggtatgccctattatatggctgaaaattatctcatctaatagttttattgtattcttagaactccaactgaaaccttagagactaacaatggttacgggcttacggcaagctatcaaggaattattagataaattaaggatacaatcatacaaactacggtgatttgctagttcaacataattattggtgatatgtttgaaataaattagggaatgatgtaatcatcggtaatttggatgtttatactaagggctttaagtgttcattgatacttcctccgtcccaatataagtgcaattttgcactattcacctccaatgtttgaccattcgttttatttaaaaaatttttatgattactatttttattgttattagatgataaaacatgaatagtactttatgtgtgactaactttttttaattttttcataaaattttcaaataagacggacggtcaaacgttagacacggattttcattgctgcacttattttgggacggatgtagtaattgttattatttagatgtttatactaagggttttcgtgttaatatttagaaatgtagacctagtttgtcacctaattatttgtttctcaaaaaggataattggtttatttttcactcgccttgccttatttttatcagtgtgaagacgaggcgagctcccttttgggagaagattcctttttaggcatatgcttccctacaaaacttccccaaagtgaacctggaggagattttttttttggcgagagagagagagtgggaggggcacctaccccttcaagcccacgaccacggccgccgcctcttcttgtgcacaaggggacgttgtgtgcttcgtgcacacgcatggccgacacgagaggctccacttcctctggcggcggcgatgacaggggcagagaaggccacgatgacttcacagggggcggccaatacaacaggtaccataggatccttgaggccgtgccgtcaccccttgttaggcgtgagaatggtgtgcatcatcagtaccccactggcctaatccaccacccgtcgtcgacaatgccggtggcgccatgctcctacgtgccccggtacaccatggtgccaacatccgccatgctcccgctgcagcaccaccaccgccaattgcagatatctcaaggttagtcttctcctaaccgccatatacatcttgttgcaccacgatcatctgcacttgttgaattcagcacgaagatattttccccatagggcttcgtctaggtcagtctagggtttattgtgcatgtggggcctatgttttttcatggttcctgctacctacatataagatccggtgtctctcttcccttgccactgttccttgcatgtcaggtagggtttctgtctcattagaatcacgcatgttcttgtgagcataaaaatcattctacagtttgagatccactgcaagtctgcaacaacatggtaactaggatcttcaatgtaattcatgtatgttatacatcatcttgcatttcttatggtcagtgacgacatatatagatagcaattatgtacagcatatatataccatcttgcatctcttgctctggtcagtgttactattcctgcttattctttaattccttatcgtcttgtgtccttatatgttatttcatcagttttgtttgatttttcttcagaaaacttccaagaccgagttccctccaataatgttgcagctccgcatcttcctagcaattttcaggatttgaggccaatgtgcaatgggccgccattcatgtcttatggccagactgcttccaatagaaatgttctttatcagaatctgacgccatactccttcaatgcatgggctagcaataacatgccgaggaaccctgtctacactagttaccaccctactgcaattgaggatccccatgctactccattccacatcaacaatcatgacacagaccaaggttatatacatgcatgcatggcctttgatgaacatagtacttagtggttgtaaaaggtttatctcctttactagtagccctatttagattagttcactactagaaaaatgattttcgcagacggggcccatttcagtatttcactaagcaggagggccaaaattttcctcccaaatggccgcctgcaatgttgtgggggggggggggggtggatggccgtccacctaacataaagggttatttcctttagaagatttaagagtagatttcagagggcaatgcattgattagtccaccatgaattgattatttcacaatgcatttcatccaagtgtgcaactatatggatgtcagtgttactactacttatggggtggatggccgtccacctaacataaagggttatttcctttggaagatttaagagtagatttcagagggcaatgcattgattagtccaccatgaattgattatttcacaatgcatttcatccaagtgtgcaactatatggatgtcagtgttactactacttatgcatttcctcacctctgagcatcttattgtgcaggtttcttcaccgtttctactagcttcagggtggatcaatcatttgtacatgctccttcaccctttccaccagtgtcttcatcatcccgcagtttctcttcagctcaaatttcaaatggaccgatagacgctaagaaagccaagaaatcagatataaaagtaagactcttctagagcatgttgatatattctgggttcacatgagcagtcctgacatgagatttctacaggatcaaccaattgttttaagaagaagtgatacggagagtgaaaaaaatgatgaactagatcaaactccggctagtgagccttcaagcatgagtcataacagtgcaaattcgactattgtaagtaacatgatgccttggtgatgatggcatccatatatcctgaatactactattctctatttggtacataaataaatgcattttgtaacttgataacttaattgttccattgatagattaaaagttgcaggaacaatttcattattatttttaattaggataatggcaactattccgcaattttccaactaactgcaatcattagtaccatagtttagtagtcagatctgaaccacctatacaatcattgttgactgcagtttacattgacttcaatcaatttgttctgcatgtatcttgttaattagactgctcttgtgagagccttgctctgtatatgtaaattttgcttctatcataatagaacagaggacttctcccacacccactttggaagggacattaacttcaaactgaactaactctgaattttctagcagagattcaactgtagagaataccgtgttatcttgcgcaaggagttgacaaatagtgatgttggtaatattggaagaattgtgatgccaaaggtaaaatattgtatattctcacattaatatattatatctacaacaaatacagttctagcatgatccacataactacggtgcaatatatttagttacgagtcttgagacttgagagtcgagtgtaattttattatcttcaaattttgtagagggatgcagaggctcatcttccagcattgcatcaaagggaaggtgtgatgctgaaaatggatgacttcaagcttgaaactacttggaattttaagtacaggtaatcttatcataatatcatattactagtctagcagagttgtgtgcagcaccagatcaagttcgaatattatgtaatgtggtacagtgttagagagttggtatatctgcctattactccctccgttttttaatagatgacaccgttgactttttctcacatgtttgaccattcgtcttattcaaaaattttatgcaaatgtataagatataaatcacacttaaagtactatgagtgataaaacaactcataacaaaataaattataattacgtaatttttcgaataagatgaatggtcaaacatgtgagaaaaagtcaacggcgtcatctattaaaaaacggaggtagtattatctaattcaatcctatcttgagaaagtattttacattatcaagtgcatgtggcctcatttcagcatgcaatccaaatagttataaataatcttaaacatagaatagaatatataatggtgttgtctatcggtgcacagatatgcaatttgatctacgcatagagaaacagtacagcaaatcagactatggaaagtgcaatcacatttttagttgactttgttaatctgtttctctctctgtagataaaaatttgacctttacaaacaagcaataggtgatacaatcatctgcgttgtcacttttttttttcaaaatttttcgtaattatttgggtcacatgcgagaaacacaaacatatatggcttgtaatccgctacatattactcataggagatacctttcaggttctggcccaacaacaagagcagaatgtatgtcttggaaagcacgggtacgtttaaacattgaaacatatacttttggatttttcttagtttgtactggagctgatgaattgctctctttaggtggctttgtgaagcagcatgttctccagacaggggacatattcatcatctacaaaagctcggagtctgagaaattagtacgtcgatcgtaacccgaattccttttgtcacccccataatctattggatttctggtttctacatatggctaatctttatgagaaaatccaagaaatgtatagatattttcctgaagttgtattgctgatatttccatatatgttgccttatgcctctactgtgctggctcttttgaaggttgttcgtggggagaaggccattaagccgaatgtcatcatgcctattgtggactgcagctgcaaaaatgatctcaacaacagcgaagaatgcgggttcgctatcagcctgctgactaagaaaacctgatgtggaatggcagcttcatgtcttgagaccatcatctgaaagcctcattacaaggcaatgcatttttgttattggagaatgtgttgccccacacttttaacttcatagataaaagtacaagactatggattattatttagtaactctttttttttccaaataatagtccacatcagagattgcaacagc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0676600, RefSeq:Os04g0676600