Difference between revisions of "Os05g0136100"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os05g0136100| Description = Zinc finger, FYVE/PHD-type domain containing protein| Version = NM_001187279.1 GI:297723688 GeneID:9267386| Length =...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os05g0136100|
 
GeneName = Os05g0136100|

Revision as of 20:03, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os05g0136100

Description

Zinc finger, FYVE/PHD-type domain containing protein

Version

NM_001187279.1 GI:297723688 GeneID:9267386

Length

1510 bp

Definition

Oryza sativa Japonica Group Os05g0136100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:2089297..2090806

Sequence Coding Region

2089297..2090125,2090307..2090364,2090785..2090806

Expression

GEO Profiles:Os05g0136100

Genome Context

<gbrowseImage1> name=NC_008398:2089297..2090806 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:2089297..2090806 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccgccaccgccgccgatgatgcccaccggcggctaccccggccaccgcggctgcggcggcgaccgctgcggctccgggcgcgacgcctggcccctccacaacgtccggcaccagggcgtcttctgccgcctctgctcctcctgcgtcctcctctaccaccccgccgccttctgctccgcctgcctcctcctcctccctcccgccgccgcccccgtcgccgccccgcccggccccgtctccgcctgctcctcctgcggcctcttcgtcgcccaccactcctgcgtcccggaccccgtctccttcgtctgccccacctgcgccgacgccgccgtgggcagggtctactcctacacccccgccgccgccgccggccgccgccgcacgatggacgagcgcgccgcgcgcgtcctcctcgtggcggcgcgcctggcgcacgagtccatctcgcgcgccgcggcggcggcgcgcgaggaggcggaccgcgccgcccgggaggcggccgtggcgcggaagcacgcgcgcgagctgctcgacgccgcgtgccgcgcggcggagccggaggccttggaagccaagaagaaggccgaggcccccgttgcgcccgcggccgcgccgccaccgccgccgccgcagcccaagaagaaggcacccccgaagagcagcgaggcgagcagagacagggacaacaagccgctcaagctcaccgccacgcagcagccggcgctggcgttcgccgcggccgccgctgccgcagccagctcgatgccattgtcaatgccgtcacccatggaggtggacgagaagccggtgatagaggagttgcaaggttcaggagacgggtcgttgatatatgatcgtggctcgctgttcgggaccttgcaacgtggtgagttcaatcaaagttga</cdnaseq>

Protein Sequence

<aaseq>MPPPPPMMPTGGYPGHRGCGGDRCGSGRDAWPLHNVRHQGVFCR LCSSCVLLYHPAAFCSACLLLLPPAAAPVAAPPGPVSACSSCGLFVAHHSCVPDPVSF VCPTCADAAVGRVYSYTPAAAAGRRRTMDERAARVLLVAARLAHESISRAAAAAREEA DRAAREAAVARKHARELLDAACRAAEPEALEAKKKAEAPVAPAAAPPPPPPQPKKKAP PKSSEASRDRDNKPLKLTATQQPALAFAAAAAAAASSMPLSMPSPMEVDEKPVIEELQ GSGDGSLIYDRGSLFGTLQRGEFNQS</aaseq>

Gene Sequence

<dnaseqindica>1..829#1011..1068#1489..1510#atgccgccaccgccgccgatgatgcccaccggcggctaccccggccaccgcggctgcggcggcgaccgctgcggctccgggcgcgacgcctggcccctccacaacgtccggcaccagggcgtcttctgccgcctctgctcctcctgcgtcctcctctaccaccccgccgccttctgctccgcctgcctcctcctcctccctcccgccgccgcccccgtcgccgccccgcccggccccgtctccgcctgctcctcctgcggcctcttcgtcgcccaccactcctgcgtcccggaccccgtctccttcgtctgccccacctgcgccgacgccgccgtgggcagggtctactcctacacccccgccgccgccgccggccgccgccgcacgatggacgagcgcgccgcgcgcgtcctcctcgtggcggcgcgcctggcgcacgagtccatctcgcgcgccgcggcggcggcgcgcgaggaggcggaccgcgccgcccgggaggcggccgtggcgcggaagcacgcgcgcgagctgctcgacgccgcgtgccgcgcggcggagccggaggccttggaagccaagaagaaggccgaggcccccgttgcgcccgcggccgcgccgccaccgccgccgccgcagcccaagaagaaggcacccccgaagagcagcgaggcgagcagagacagggacaacaagccgctcaagctcaccgccacgcagcagccggcgctggcgttcgccgcggccgccgctgccgcagccagctcgatgccattgtcaatgccgtcacccatggaggtggacgagaagccggtgatagaggagttgcaaggtgagcagaacactgaaccagccaccacattgatcgaattgggagataattgttctgtacaatgattggtatataattcttcatcgaatttgggagctaattgttctttacaatgattggtcttcatcaaaattgggagctaattgttctttacaatgattgatatgtaacagtcttgcaggttcaggagacgggtcgttgatatatgatcgtggctcgctgttcgggaccttgcaacggtgagatttgggcgccgaatcctgcttcttcttccatggcattatgcatcgctgtagcgcattcgatcctagaagagaagggcactcaagttcagtggtacaaggattgcaatgtgattgaatccccatttttgagtgttcttgctgtaaattctagtcttgacttggtacatgatccttccatcaactgtagctcgcctgcatcttatataccctgtttgttatttgtagtacagcgaaatgtgttgctggtggatgaatcgcatatggttttggttttttcttaaatgaaatgaactagattcagaattcatgaatacataatttctttgctggttgtgggacctgttgcgaatcgaagacagtccttctgcttatttgtgtgttcttccatttttgttgtctgtcatggtatggcagtggtgagttcaatcaaagttga</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0136100, RefSeq:Os05g0136100