Difference between revisions of "Os05g0147400"
(Created page with "{{JaponicaGene|
GeneName = Os05g0147400|
Description = Similar to T-complex protein 1, zeta subunit (TCP-1-zeta) (CCT-zeta) (CCT-zeta-1) (Tcp20) (HTR3) (Acute morphine depen...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os05g0147400| | GeneName = Os05g0147400| | ||
Revision as of 20:04, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os05g0147400 |
|---|---|
| Description |
Similar to T-complex protein 1, zeta subunit (TCP-1-zeta) (CCT-zeta) (CCT-zeta-1) (Tcp20) (HTR3) (Acute morphine dependence related protein 2) |
| Version |
NM_001061176.1 GI:115462082 GeneID:4337802 |
| Length |
4555 bp |
| Definition |
Oryza sativa Japonica Group Os05g0147400, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 5:2696881..2701435 |
| Sequence Coding Region |
2697090..2697165,2697240..2697358,2697438..2697545,2697630..2697698,2698004..2698098 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008398:2696881..2701435 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008398:2696881..2701435 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgtcgctccgcgtgctgaacccgaacgcggaggtgctcaacaagtcggcggcgctgcacatgaacatcaacgccgccaagggcctccaggacgtgctcaagaccaaccttggccccaagggcaccatcaagatgcttgtgggtggagctggcgacatcaagctgaccaaggatgggaacactctcttgaaggaaatgcaaatccagaacccaacagctatcatgatcgcaaggaccgcggttgcacaggacgataccagcggtgatggcacaacctccactgtgctttttattggggagcttatgaagcaatctgagcggtgcattgatgaaggcactcatccacgttttttggttgatggttttgatgttgccaagagagcaactcttgaatttctcgagaagttcaagacatcagttgtcatgggcgatgaacctgacagagagatcttgaaaatgatagcaagaactactctaaggacaaagctgtacgaaggattggctgatcagttgactgatattgttgtgaatgcggttctatgcatccgcaaacctgatgaaccaatcgatctttttatggttgagataatgcacatgcgccacaaatttgatgttgacacacgtctggttgagggtctggtcttggaccatggttctcggcaccctgatatgaaacgcagggcagagaactgttatatcttgacctgcaatgtctcactggaatatgagaaaagtgaaataaatgcaggatttttctactcgaatgcagaacaaagagaaaagatggttgctgcagaaaggcgccaagttgatgagcgtgtgaagaggattattgaattgaaaaataaggtttgtgctggaaatgataaaaattttgtggtgatcaatcagaagggtattgaccctccatccctcgatctcctagctagagcagggattattggtctccgaagagcaaagaggagaaacatggagaggcttgtgttagcatgtgggggtgaagctgttgattcagttgatgatttgactgaagattgtcttggctgggctgggcttgtctatgagcatactcttggtgaagaaaagtacacctttattgagaatgtgaaaaatcctcgctcttgcactatactgattaaagggcctaatgatcacaccattgcgcaaattaaggatgctgttcgcgatggtctaagatctgttaagaatacggttgaggatgaagcagttgtgctgggagcaggagcatttgaggttgctgcgaagaagcatcttattgacaacgtgaagaaaactgtcaaaggacgagcacaacttggggtggaggcatttgctgatgctcttcttgtcatacccaaaacactagcagaaaattcaggtctagatacccaagatgttattgtctctctccagaatgaacatgatcgtggattggtggtgggattgaaccatcactctggcgaaccaattgatccccaaatggagggcatcttcgacaattactccgtgaaacgccagatcatcaattccggacccatcatcgcgtcacagttattgcttgtggatgaagtgatcagggctggccgcaacatgaggaaaccaacctaa</cdnaseq> |
| Protein Sequence |
<aaseq>MSLRVLNPNAEVLNKSAALHMNINAAKGLQDVLKTNLGPKGTIK MLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDTSGDGTTSTVLFIGELM KQSERCIDEGTHPRFLVDGFDVAKRATLEFLEKFKTSVVMGDEPDREILKMIARTTLR TKLYEGLADQLTDIVVNAVLCIRKPDEPIDLFMVEIMHMRHKFDVDTRLVEGLVLDHG SRHPDMKRRAENCYILTCNVSLEYEKSEINAGFFYSNAEQREKMVAAERRQVDERVKR IIELKNKVCAGNDKNFVVINQKGIDPPSLDLLARAGIIGLRRAKRRNMERLVLACGGE AVDSVDDLTEDCLGWAGLVYEHTLGEEKYTFIENVKNPRSCTILIKGPNDHTIAQIKD AVRDGLRSVKNTVEDEAVVLGAGAFEVAAKKHLIDNVKKTVKGRAQLGVEAFADALLV IPKTLAENSGLDTQDVIVSLQNEHDRGLVVGLNHHSGEPIDPQMEGIFDNYSVKRQII NSGPIIASQLLLVDEVIRAGRNMRKPT</aaseq> |
| Gene Sequence |
<dnaseqindica>4271..4346#4078..4196#3891..3998#3738..3806#3338..3432#3049..3253#2782..2868#2588..2702#2191..2297#1847..1939#1703..1750#1449..1600#865..1000#702..765#81..214#atcgccgccgcgccgcgccgcgtgcgaatctccggcgaggatcgagggcgcctctggtcccgtctggtggtcggtcagccatgtcgctccgcgtgctgaacccgaacgcggaggtgctcaacaagtcggcggcgctgcacatgaacatcaacgccgccaagggcctccaggacgtgctcaagaccaaccttggccccaagggcaccatcaagatgtatggccttccttctctctctctctctctctctctctctctctcccatctcgttgggcgctcctgtgctagctggtttgatctggttcgatgcggggggaggtgttgcatcggctagatcacacacgcgcgcgcttgcgcgtagctgtagtagattcgcgaggcgtaggctttctctgattttttttgttgtgtgtgctgggctgtggatgcggtttctgtggtttgcagatgcgttatttctagatttgcgcggcgaggtgccgcacactgtttgatccagttcgtaggttcggaatggcggatgtttggaagggtttggtaatgaggtagctggctagctgctaagatttgcaatggcggtgttcttttttttttttttggaatagcgatttctagatgtctaggtagaggtacgatgtgttgtaatggctgtgatccagcgaaatttgctctacctgaatgcgttcgctattttgctgcacaggcttgtgggtggagctggcgacatcaagctgaccaaggatgggaacactctcttgaaggaaatggtatagttacgcttggcaattagtgtttgtggcgagggcattttagtgttggaagtgatctgatctttggtttgtggcttcttgcgtctcgatttacagcaaatccagaacccaacagctatcatgatcgcaaggaccgcggttgcacaggacgataccagcggtgatggcacaacctccactgtgctttttattggggagcttatgaagcaatctgagcggtgcattgatgaaggtatgttcatttgaacctatacctttttctatagttcaatatgactggatttataatatatcgattacatctgaaatatcacttgcgcgtctaggagaattgtaaaagcttatacaaaggaaggtgaaggatagagtaaaactagattctttgattatgtgttatgctctcccttctgttaaacatgtgtaatgtggagatattacgatgagaagttgtagcatggctcattgtgttttctagttaccttgtcatgcatttctaggctagtttggatcctcactgcacaaatttaatcttgaaaaataaggatatgcagaccttctgtgctaaggtcacagcacaaaattgtcttcaagtcgtaaatttgtgtaggcaaaaccttatctttatacgataacttgctacttactataaactcaatagtaactgattgtcattcttgtaggcactcatccacgttttttggttgatggttttgatgttgccaagagagcaactcttgaatttctcgagaagttcaagacatcagttgtcatgggcgatgaacctgacagagagatcttgaaaatgatagcaagaactactctaaggacaaaggtaggcgcagtttgttttcttgctttcaagctttctttacttgggcaggtaacgtatagactatataatatttcaacatttataaaatcgactattttgcagctgtacgaaggattggctgatcagttgactgatattgttgtgaatgcggtaatattttctttctgatatttgtttttcttgggaaggttcaagtttactcattgtatgaacatatttgaattttcattaaaatctatgttttaggttctatgcatccgcaaacctgatgaaccaatcgatctttttatggttgagataatgcacatgcgccacaaatttgatgttgacacacgtctggtatgtattcatttttctttatttctcaagatagacttattctgatcttcatattccctttagaagaacaagttattttacccagctaagcttttgaactgagcagcttgcctatccattctttatgctaatactaatctctgtatgattcagcagactaaaatgaatatgttgatttacatactatacagaattcgtaatggatacaatgtgacaatgcttaccccactgctttgatattgttattataggttgagggtctggtcttggaccatggttctcggcaccctgatatgaaacgcagggcagagaactgttatatcttgacctgcaatgtctcactggaatatgagaaaaggtacacgacttttacaaatatgtactttgttatgttggttaacacattcttatttgcccttttgtgttgatttcatctgctcatgcctctaagaaaacacgactttttataggctgttaaagtaacgtacttaaagcaagccatatttgctcttcatgtatgctaccttgtctgccgttaagaccggttgcacacacttgtacttagcttagttcctttacttgaaactattcctatatttgccatgcatcattgaagggaaactgttaactgatatatactcttctcagtgaaataaatgcaggatttttctactcgaatgcagaacaaagagaaaagatggttgctgcagaaaggcgccaagttgatgagcgtgtgaagaggattattgaattgaaaaataaggtagttcacttatttcacctgcagtgccttttttctgtacacttccagaaaatccttcatattgtttcatgaatttcaggtttgtgctggaaatgataaaaattttgtggtgatcaatcagaagggtattgaccctccatccctcgatctcctagctagagcaggggtaatgttctctgatggatctgaactacatactttcaagcttcaaccatttagattcctgcgtttgtttaggatgtttctgaatggaagcatcataacagctaatatttgttgttaaatctgttctttcaatttttattattggagcttattcttcaagatgcttttttacatgctacagattattggtctccgaagagcaaagaggagaaacatggagaggcttgtgttagcatgtgggggtgaagctgttgattcagttgatgatttgactgaagattgtcttggctgggctgggcttgtctatgagcatactcttggtgaagaaaagtacacctttattgagaatgtgaaaaatcctcgctcttgcactatactgattaaaggttgattactcttgaactataataatgatctttttccaatattctggtttggtggtgaacttactgtaaagtcaatatctccagggcctaatgatcacaccattgcgcaaattaaggatgctgttcgcgatggtctaagatctgttaagaatacggttgaggatgaagcagttgtgctggtaagctagagatggacagaacttcacgatccaccttgtgcacattaagtttggctacatctcttggttattttagattccattattttagtatactttaccagcttctgatgcataggccaaacagctataattacatttttagcacatcttttgttcatataagttgcagagttgccattagatgcatgtgtattccaaaggttgcttataaaatcatttttattatcttttatttttgaaatgaaaccatgtttattatcttcagactgcttgattcttacattgtcatttgtcaactgtagggagcaggagcatttgaggttgctgcgaagaagcatcttattgacaacgtgaagaaaactgtcaaaggagtaagtgtactgcaatgtcaatatgctttaacttcaatgtagcaaaacattgatattctctcgacttctgaaccttggcaacagcgagcacaacttggggtggaggcatttgctgatgctcttcttgtcatacccaaaacactagcagaaaattcaggtctagatacccaagatgttattgtctctctccaggtatgaacacattttcagtgctgcacctcatccttaaattggaggtcagtaattttaactgtttctgtgctttctgaagaatgaacatgatcgtggattggtggtgggattgaaccatcactctggcgaaccaattgatccccaaatggagggcatcttcgacaattactccgtgaaacgccagatcatcaattccgggtatgtaattaagttattcttgccttatttgcccaacaacatcctaaatcctaactggtttttctttggtgcagacccatcatcgcgtcacagttattgcttgtggatgaagtgatcagggctggccgcaacatgaggaaaccaacctaatactttccctacctgccgctgagtcctctgttttgtgggagatattacgcattttgtttggttattttgcctttctatctttagtttgtgcgtagtagtgaggtgggtgaaatgtccggaggttctgctagtttgttcctctttgactgtaacagatttcacttgtaatctttgtcacactgtcatttatgccgtcctgatgatttggg</dnaseqindica> |
| External Link(s) |
