Difference between revisions of "Os05g0155700"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os05g0155700| Description = Conserved hypothetical protein| Version = NM_001061228.1 GI:115462186 GeneID:4337855| Length = 5252 bp| Definition ...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os05g0155700|
 
GeneName = Os05g0155700|

Revision as of 20:04, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os05g0155700

Description

Conserved hypothetical protein

Version

NM_001061228.1 GI:115462186 GeneID:4337855

Length

5252 bp

Definition

Oryza sativa Japonica Group Os05g0155700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:3235618..3240869

Sequence Coding Region

3235631..3235831,3235933..3236070,3236905..3236986,3237100..3237176,3237271..3237377
,3237809..3237947,3239044..3239160,3239292..3239383,3239538..3239604
,3239719..3239797,3239897..3239988,3240193..3240336,3240537..3240677

Expression

GEO Profiles:Os05g0155700

Genome Context

<gbrowseImage1> name=NC_008398:3235618..3240869 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:3235618..3240869 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacgccgccgtcgtcgccatcgccggcgacggggacgccgacgccggccaccgccgtcctctcctcgcctccgccgacgacgacgacgagatccgcccctaccccgcatcatccccttcgccgcagcacccggcgggggctgagcggaagccgcggcgggtcgcctcgctcgacgtgttccgcggcctcaccgtcgccatgatgatactggtggacgacgccggcggggcgtggccggggatgaaccactcgccgtggctcggggtgacggtggccgacttcgtcatgcccgccttcctcttcatcatcggcgtctccgccgccctcgtcttcaagaaaacaccaaacaaaacagtggcaactaagaaggctgcaatcagggccatcaaacttttcatcttgggtgtaattttgcaaggaggatatattcatggcagacacaatttaacttatggcattgatttggatcatattcgatggctaggtgtgctgcagaggatagctattggatactttctagcggcaatttcagagatttggcttgtcaacaatatttcagtggattcagctatatcatttgtgaagaaatacttcatggagtggatcgtggccgtaatgatttcagcactttatgttggcttgctactcggcctttatgtttcaaattgggaatttaaagttcaaactagcaattcaatccttacaattccaactccgggcaacgaaattggaatgaaaatgatccagtgtggagttagaggtagtcttgggccaccttgcaatgcagttggatttgtagatcgagttttacttggtgaaaatcacctgtacaagaacccagtctataaaaggactaaggaatgcagtgttaactctcctgattatggaccacttcctccaaatgcaccagactggtgcctggctccatttgatcccgagggtttgctaagtacattgatggctgcagtgacttgctttgttggattgcattttggacatgttttggttcattgcaaggatcattcacctcgaatgctattatggctactagcttccactgtgttaacagtctcaggatttctacttcagttattaggcatgcctttcagcaagcctttgtacacggtgagctacatgctactaaccggtggggtatctggattcctgctgttgttgctatactacattgttgatgtcatcaatatcaagaagccgttcatcctattccagtggatgggcatgaacgcgcttatagtgtatgttcttgctgcttgtgagatcttccctacacttgtgcaagggttctattggagatcacctgaaaacaacctggtggatttgactgaatctctgcttcagacaatcttccactccaaacgctggggaaccttggcgttcgtcgtcttggagatcatcttctggtgcctggctgcttgtttcctccacatgaaaggcatatacttgaaactgtag</cdnaseq>

Protein Sequence

<aaseq>MDAAVVAIAGDGDADAGHRRPLLASADDDDEIRPYPASSPSPQH PAGAERKPRRVASLDVFRGLTVAMMILVDDAGGAWPGMNHSPWLGVTVADFVMPAFLF IIGVSAALVFKKTPNKTVATKKAAIRAIKLFILGVILQGGYIHGRHNLTYGIDLDHIR WLGVLQRIAIGYFLAAISEIWLVNNISVDSAISFVKKYFMEWIVAVMISALYVGLLLG LYVSNWEFKVQTSNSILTIPTPGNEIGMKMIQCGVRGSLGPPCNAVGFVDRVLLGENH LYKNPVYKRTKECSVNSPDYGPLPPNAPDWCLAPFDPEGLLSTLMAAVTCFVGLHFGH VLVHCKDHSPRMLLWLLASTVLTVSGFLLQLLGMPFSKPLYTVSYMLLTGGVSGFLLL LLYYIVDVINIKKPFILFQWMGMNALIVYVLAACEIFPTLVQGFYWRSPENNLVDLTE SLLQTIFHSKRWGTLAFVVLEIIFWCLAACFLHMKGIYLKL</aaseq>

Gene Sequence

<dnaseqindica>14..214#316..453#1288..1369#1483..1559#1654..1760#2192..2330#3427..3543#3675..3766#3921..3987#4102..4180#4280..4371#4576..4719#4920..5060#aaacgacccaaaaatggacgccgccgtcgtcgccatcgccggcgacggggacgccgacgccggccaccgccgtcctctcctcgcctccgccgacgacgacgacgagatccgcccctaccccgcatcatccccttcgccgcagcacccggcgggggctgagcggaagccgcggcgggtcgcctcgctcgacgtgttccgcggcctcaccgtcgccgtgagcctccttcctcgaccggatttctcccgacggcgtggtcggggatcctctcattctcgtggtgactgggggtttggtttttttggttgggggcgcagatgatgatactggtggacgacgccggcggggcgtggccggggatgaaccactcgccgtggctcggggtgacggtggccgacttcgtcatgcccgccttcctcttcatcatcggcgtctccgccgccctcgtcttcaaggtatacacccccaaccctagtgccctctcctgcttacctgacgcccaaacccgaattctgctacttcaagaaaaagctttgatatgtagtactccatccgtttcagattataagtcgtcttgactttgctacaggtttgatcaagtttgtagaaaaaagtaataacattttcaacccaaaacaaatatattatgaaaatatattcaactattgatttaatgaaactaatttggtgttgtaaatattactatatttgttttcaaactcagttaaaattggagtagtttgactttgaccaaagtcaaagcgacttataatctgaaacatagggagtatcaagcaaatcaaaggaactttgatgtgcctgtgacttgtaaaaattggcccgtgtgtgttgaacctaggtaattttggtttggggaatttgttgagataccctattgctgactaagtttcagaggatttgtgaatactcagttgttaagccaatgaggtaatgagcatatctgctgtgcaaatcttctgaaactttgtgagaatataataggctacctgattgcaatgccaaaaaaattctgcaaacctttatgccacaatctttttatcctggttaccttttctactttaaatctggtatacctttttttgtttccaacttctgttccaatctgccaagtgatgtaagcatataacaaaatttaatgcctatgtcattgtgctccatcacttggaatgtgtgtgattactcatgatgttggtgctcactgcgtgacttaaaccactggctgcttagttatagaataacatctgactattgtggatgatgcacaacagaaaacaccaaacaaaacagtggcaactaagaaggctgcaatcagggccatcaaacttttcatcttgggtgtaattttgcaaggttatacttatccctgtgtttccttgccaactataccagcaacatttagctccatattttgccatttcttttggtcggagtttttcctttttaaaattatatcttacctgtaggaggatatattcatggcagacacaatttaacttatggcattgatttggatcatattcgatggctaggtgtgctgcaggtagtgtttaaaaacaaaaggagaagctttatcacatttcctcttcggcttactgaatgttcgaaacgttaacttgttgttatacttctggtagaggatagctattggatactttctagcggcaatttcagagatttggcttgtcaacaatatttcagtggattcagctatatcatttgtgaagaaatacttcatggagtggttagttaataagtgtaacaatttactatggaaagtttcagtttttgttcagcatttggaattatgtaatccaatcattgtttatacatgctgattacattctatgttcatgtaaagtggtatttgctctacaaacgttccatgatatgaaataacatgtttagttgtccatctaaagaatgttatctgcattagttgattaatagtcctgaatttgggggagttttggtaattctggtcattttgattgctcgatctgttcatctgctagagggttaggtaacttttttctgtacagttaaaaaaattgcaatatttgtagtttggctgtgcttcatatgagattataactgagaattattctgaactcaagacatggaagatatactaatatggccataccatttctgacatttgtttatcgtttgaaggatcgtggccgtaatgatttcagcactttatgttggcttgctactcggcctttatgtttcaaattgggaatttaaagttcaaactagcaattcaatccttacaattccaactccgggcaacgaaattggaatgaaaatggtaagaagagaatatcctgtttaatctaaacactttattctatttggatggtatcctgtgtgctcaagaatcggattgctagatgtaccatttgtttgcttttcatgtgattttgtttcaatacttgaagcacatcatgattctgtatctgtagtgatatatttggttggatgaaacctactcaagttgctggaatgcaatatttcaatcatgtctaactgagctttattcagtaaatatactttgaccccatttatgctgactattttccttttgacaaaaatgttttgattgggtgacagacccttttcgtatttacacagttatatttttcaaaactagttgatatgtttggtgacattttaagatacatgaattcacggccatcatatttgtcccattgtttcgttctcagatgcttatccagaattgatttaccaggaataacccaagtcttgataaaaaaaatactggatcaggccagtactgcttcctggcaaagactggggaaaagaattcctgaacggttgctaactaaaactcaacttcaaccgaattttaattgaagaaggttcctagttggttaccctggattcaggaattcaaaattgaattgaatttagtatgtatattaagaaaatatcagattttgtaaatcctgattcgtacagtacttctagaaccagaactccagaagttactggtggatatgaaaccttatgttcagatcagataagtcagcttatccagtgttgagagctaggtgtcgtggagtttttacttgtgggttcctttacagcattttgtggtcctaatcaccatatctaccttgttgcagttactaacctaagaaaatatcggattttgtatatccttattcataaagtatttctggaaccaaaactccataagttactggtggatatgaaacctaggttgaataactggtcaattcatccagtgtttgaaagctaattgctgtggagtctttacctgtggctgtgggttcctttacagctttttgtggtcctaatcatcatatctacatcgttgcagttactaacctgttttgctggttttgtttttggtgtttcagatccagtgtggagttagaggtagtcttgggccaccttgcaatgcagttggatttgtagatcgagttttacttggtgaaaatcacctgtacaagaacccagtctataaaaggactaaggtctttttttccttaagcaaacacatgatattgatcttttcccgattcacttggatatcaaatagccatgttcttataggataccaatttgaaaaatatgcaagattaaattccttttatttgctccataggaatgcagtgttaactctcctgattatggaccacttcctccaaatgcaccagactggtgcctggctccatttgatcccgagggtttgctaaggtggttatttatatcttttatttttattatttggttcttaaaataattgtacaaccgattcaatcctcaattgacctgaccaatgtttatcaattgaaccttcccatttcctgtaggcaaaccagaaaataacctcccttattggtttttacagtacattgatggctgcagtgacttgctttgttggattgcattttggacatgttttggttcattgcaaggtagtgcccatgaactgcatacctcccttttagaatctcttgaaccttgagcaaaatggaatttaaaaacacaatgatatttccagacttctctaacctttgcttctaccacaggatcattcacctcgaatgctattatggctactagcttccactgtgttaacagtctcaggatttctacttcagttattaggtaattatgtgtttcgtgagactgctggcattcagcaatttgttgttttaatcagagcttccattcctcaatctgattcatgcatgttttggtcattaggcatgcctttcagcaagcctttgtacacggtgagctacatgctactaaccggtggggtatctggattcctgctgttgttgctatactacattgtaagtttgagtgctcgaacaatctctggaaaccgtactgtgggatagtatggtatcactatatatgtaatcttaatgacggttgatgtacccatgttagtttgtggaagctttaccttttctgttcgaacaaactgttatgaaggcagataatattacctcattagtggattctgattcacagagcctctttttgtcatgcaggttgatgtcatcaatatcaagaagccgttcatcctattccagtggatgggcatgaacgcgcttatagtgtatgttcttgctgcttgtgagatcttccctacacttgtgcaagggttctattggagatcacctgaaaacaacctggtaagcaacttgctgtgctgtgcatcctaccatatatggggtggattctttcatagatgcaatatttactcaagaataccaaattcctcttttcctggagcaataaccttacatgttagctaacagaaaatgatcttgcaaagctctactacctctagagacttgattcatagcgcggaaaattctcctttttatttcaggtggatttgactgaatctctgcttcagacaatcttccactccaaacgctggggaaccttggcgttcgtcgtcttggagatcatcttctggtgcctggctgcttgtttcctccacatgaaaggcatatacttgaaactgtagctgtagagccattcatttccctgcaaaaacacattttctgcagaaaatgttcttttttggcccaagcaagggccttccttgtaaatcttctgaaacaattctctgtaaatgcacttcctccatttgtacactgcaactgaattgatcgccctgatgtatcattttgtaaattcaatgcgtggatttaattgt</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0155700, RefSeq:Os05g0155700