Difference between revisions of "Os05g0163100"

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(Created page with "{{JaponicaGene| GeneName = Os05g0163100| Description = Zinc finger, FYVE/PHD-type domain containing protein| Version = NM_001061268.1 GI:115462266 GeneID:4337899| Length =...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os05g0163100|
 
GeneName = Os05g0163100|

Revision as of 20:05, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os05g0163100

Description

Zinc finger, FYVE/PHD-type domain containing protein

Version

NM_001061268.1 GI:115462266 GeneID:4337899

Length

4446 bp

Definition

Oryza sativa Japonica Group Os05g0163100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:3675956..3680401

Sequence Coding Region

3676183..3676437,3676520..3676646,3679715..3679937,3680034..3680066,3680158..3680296

Expression

GEO Profiles:Os05g0163100

Genome Context

<gbrowseImage1> name=NC_008398:3675956..3680401 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:3675956..3680401 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacgcatcctaccgccgcgacggccgcggaggcggcggcggcgggggcggcggcggttccgcccctcgctccgtcgaggacatcttcaaggacttccgcgcccgccgcaccgccatcctccgcgccctcacccacgacgtcgaggatttctacgcgcagtgcgatccagagaaggagaatctgtgcctgtacgggtacgcgaacgaggcgtggcaggtggcgctgccggcggaggaggtgcccaccgagctgccggagccggcgctcgggatcaacttcgcccgcgacgggatgaaccgccgcgactggctcgcgctcgtcgccgtccactccgactcgtggctcgtctccgtcgccttctactacgccgcgcgcctcaaccgcaacgaccggaagcgtttgtttggcatgatgaatgatttgccaactgtttacgaagtcgtatctggttcaagacaatctaaggagagggacagatccggcatggacaacagcagcagaaataaaatttcatcgaagcataccagcgacgtggcgcgtgtcgaaaataatatcaaggaggaagatgaaggctacgacgaggacgatggcgaccacagtgagaccctatgcgggacttgcggtgggatatacagcgccgacgagttctggatcggctgcgacgtgtgcgagaggtggtaccacggcaagtgcgtcaagatcactccggcgaaggcggagagcataaagcagtacaagtgcccgagctgcagctccaagagacctagacagtag</cdnaseq>

Protein Sequence

<aaseq>MDASYRRDGRGGGGGGGGGGSAPRSVEDIFKDFRARRTAILRAL THDVEDFYAQCDPEKENLCLYGYANEAWQVALPAEEVPTELPEPALGINFARDGMNRR DWLALVAVHSDSWLVSVAFYYAARLNRNDRKRLFGMMNDLPTVYEVVSGSRQSKERDR SGMDNSSRNKISSKHTSDVARVENNIKEEDEGYDEDDGDHSETLCGTCGGIYSADEFW IGCDVCERWYHGKCVKITPAKAESIKQYKCPSCSSKRPRQ</aaseq>

Gene Sequence

<dnaseqindica>3965..4219#3756..3882#465..687#336..368#106..244#cctcacttcgctctctcctctcctccgcatcgcgatcacctcctcctctcctctcctcgcctcgcctcgccggagatcgcctcacccacgcgccgcctccctcccatggacgcatcctaccgccgcgacggccgcggaggcggcggcggcgggggcggcggcggttccgcccctcgctccgtcgaggacatcttcaaggacttccgcgcccgccgcaccgccatcctccgcgccctcacccacggtacgcccgccgttgaaccctccctctccccacgaaaccctaaccctaaccctgaccctgactccccttctccgcttgtgcttcgtcgcagacgtcgaggatttctacgcgcagtgcgatccaggtgagctatttcacgtcgcgatctctttgttgtgatgctggtgctcgagcgaggtggggtggggggattgaaatcggggtggttttggtcgggcagagaaggagaatctgtgcctgtacgggtacgcgaacgaggcgtggcaggtggcgctgccggcggaggaggtgcccaccgagctgccggagccggcgctcgggatcaacttcgcccgcgacgggatgaaccgccgcgactggctcgcgctcgtcgccgtccactccgactcgtggctcgtctccgtcgccttctactacgccgcgcgcctcaaccgcaacgaccggtacgccctcctgatctcgcctctgtttgattttggttttgatttgtccctaattgtgccatatcagcgtaatgtttgagcttctaaattacggtatgttcatgacaaaatataaatcagggtaagagtatgaggcaacttattacttctagtgtgaggaaatgatattgtggccttggggtttgtttcgatgtaatgcttgctttggtaggtactgcttccagtgtgatgatgccaagtacagtacatattagatgcatttaagttttggttcttttggttttccatagtattatggaatattgtgggttgttgtgctgattctatatgagccaagagatttaatttgtttccaaatttgtagttccatcatgtttgtctgctttaatagtgtgctgggttattccaagggtacatctttctagaagtgaacactggtttttttgtagttttgagttgttaagagagaaaatatggctgcatactcatgcaagtaatatccctttgtattctcaggaggaaaattaaatttcctaagattttttttcctttcctgaaaaataggaatgggaaattgtgataaaggtggaatatgcagggttccatttgtcatagagaaaagaaatagatcaaaggacatgagttcctagttttggagcaaaaaggttagcacctcctgacaggagataggaaaggggatcaattccggggaagtattgtttcatttcttgcagccatcttctgcagcactgttctcttttttcacaggcctatatatatgtgctcctcctcttgattcaatttcaaaacctgtttctgcatcattgggttatggctggtcaaacttttgtcggtgccagtcaataaagtatgacctaggagttcatactatatttatccttttcatggttcaccgttaaaaattacctacaggcatcttatggtcatgctatctctctgtgttggtgctattgtaattcatcttgtctcaaagaaattctggaattatttgcaagtactcctgcttattagttatcaccctgcccttctagcatagcttggttatggtgctttggtaagtaccatgtgaaacacaagtttgaacaatataataggccttgggtagtgacacttttgggtaatatttggttattctgctgatttgagaaaacaatttcctttgttgctataactacacttttggccataatgtctgcttgcattagaatgtgctggttatattggcatgtttttgtacatacagactcgttggtaatagcttgattactaaaaggactatctgattgcattctacaacataattgtgatgtagaattgcaagcatgcctattattttgagaccttcagtttttaaccctttttttgtggaagaaggtagtaatttaaaggccatactcattcccccgtgatgaattgtttactatggccatgtggagtgacagtaatatgctcgcaaagtgatgtttttagtgtgcttttgtgcacctgttgccaataaagtatggtgttgtttctaccttttactgtgggaagagggtgactcactgactcagcactttaagagagagatagagagaaatcagagaagacagactctccaattcacaaataatgtgagagcacctatgtaggtagggaggttaaaaaacctccccaccatctgatgtagactggatctccataaagaatgttcatatgtgggctatttgattttctgctaattgttgttaatgtttgcttcaccaatttttggttgcatttgtgggatttgggatgtatttgatttggtacgaaatttggcaagatgcctttctagtgcttggccaaaatatgggttgccaattttatgaccaaatcttatctagacttttggtatgttagcaacttcgtggagctctagtttataggagccgcagctcatgctgagtttttggttctaatgttctatatagtttcactttcatatttgggtcctttgtgatagtaatgcggttactacttactagtgtctttaacttttgataattttggaggtgggaggacttctaaagttgttttgaggcaacgtttctttattcacatgggcaaacaagtttgagctgccttttgtcttatgggtatctatgaacaatgcattattgctgctatagttaaaataaggattagtattatgcttgactctggagcaagtaaaatatatcattccattagccctacaaaatttattttccagcataacttgagcaataggcatctttatttattttgggggaaatggagtaactttggatctttgtgctacttggtacttttgcacgtaaataccttgtatgaataaactacactctaaattgtcgacatgtgaatacagccattgactgttttgcatgctgaatgctgatatcctatgcatatgatgtgccatgtgttgggccatcctgcaaatatatagttgtagggctgtactgaagatgatatttttagaagttctgtactgatgaatgatggcgataaccagtaaacctatagggggcagctggcaaaaatcattcatgttgacagtccaaagtgatcttgtaatagttaatactcaattagttcctgtgtatagttgggacttgtgagcctatatttcttccttttgtttgtacagttcagaagtactgctgtttgctttatcaaacagggatagtcagatagctgatctgcctactcattcatgttttgtaggaatttaagcgttgccttggtttaaaatgggtttttttaacactccatgttccatatttactttgatttaatagccgtaatccattgtgaatacttatggattataaagcggtcttaaaattcactgaattggtagtttcataatgataactaatgtttggcatttctattttgagtataacattgttgagtataactcatattctgcatttctgtttcttgaaaatttcactccattggtagtttcctaatctcaacaagagtattaacatttgttctctcattgtccttgctgttttcgctctccaattcaacaggaagcgtttgtttggcatgatgaatgatttgccaactgtttacgaagtcgtatctggttcaagacaatctaaggagagggacagatccggcatggacaacagcagcagaaataaaatttcatcgaaggtaacaagaatttctccacagtttttcaccatttcccctcccttccatcacgagtcctgatgaacaaatcccatctccccagcataccagcgacgtggcgcgtgtcgaaaataatatcaaggaggaagatgaaggctacgacgaggacgatggcgaccacagtgagaccctatgcgggacttgcggtgggatatacagcgccgacgagttctggatcggctgcgacgtgtgcgagaggtggtaccacggcaagtgcgtcaagatcactccggcgaaggcggagagcataaagcagtacaagtgcccgagctgcagctccaagagacctagacagtagtagcatatgccaccctcctccggcgagaggaggtgtcgccggcgacgccgccattgacagaggcgtcaggctgtgggttactgtacctttcgtttttcgacttacatatgatgaagatgatgccaaatgtgaggtaagaagatcacaagacattcatgtgaggtggagatatgaggctatgtatgttgccagaggaataggggtaacgtaatatatgtaactttgcg</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0163100, RefSeq:Os05g0163100