Difference between revisions of "Os05g0207500"

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(Created page with "{{JaponicaGene| GeneName = Os05g0207500| Description = Similar to Shaggy-related protein kinase eta (EC 2.7.1.-) (ASK-eta) (BRASSINOSTEROID-INSENSITIVE 2) (ULTRACURVATA1)| ...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os05g0207500|
 
GeneName = Os05g0207500|

Revision as of 20:06, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os05g0207500

Description

Similar to Shaggy-related protein kinase eta (EC 2.7.1.-) (ASK-eta) (BRASSINOSTEROID-INSENSITIVE 2) (ULTRACURVATA1)

Version

NM_001061436.1 GI:115462602 GeneID:4338079

Length

4013 bp

Definition

Oryza sativa Japonica Group Os05g0207500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:6639540..6643552

Sequence Coding Region

6640078..6640170,6640282..6640383,6640907..6640990,6641175..6641270,6641358..6641408
,6641522..6641662,6642010..6642066,6642148..6642222,6642308..6642580
,6642674..6642733,6643169..6643270,6643362..6643436

Expression

GEO Profiles:Os05g0207500

Genome Context

<gbrowseImage1> name=NC_008398:6639540..6643552 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:6639540..6643552 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaccagccggcgccggcgccggagccgatgctgctcgacgcgcagccgcccgccgccgtcgcctgcgacaagaagcagcaggagggggaggcgccgtacgcggaggggaatgacgcggtgaccgggcacatcatctccaccaccatcgggggcaagaacggcgagcccaagaggacaattagctacatggcggagcgcgttgtgggcactggttctttcggtatcgtctttcaggctaaatgcttggagacaggagagactgttgccattaagaaggtattgcaggaccgacggtacaagaaccgtgagcttcagcttatgcgcgccatggaccaccccaatgtcatctccctgaagcattgcttcttctcaaccacaagtagggatgagctgttcctcaatcttgtcatggaatatgttccagaaacactctaccgtgtgcttaagcactacagcaatgccaaccaccggatgccacttatctacgtcaagctttacatgtatcagttatttagggggcttgcgtacattcatactgttccaggggtctgtcatagggatgtgaagccacaaaatgttttggtggatcctctaactcatcaagtcaagctctgtgactttgggagcgcaaaaacactggtcccaggtgaacccaatatatcatatatatgctcacgctactaccgagcaccggagctcatatttggtgcaactgaatatactacatcaatagatatatggtcagctgggtgtgttcttgcagagctactccttggtcagccattgtttccaggggagagtgcagtcgatcagcttgtagagataattaaggttcttggtacaccaacccgtgaggaaatacgttgcatgaacccgaactatacagagtttaggtttccacagataaaagctcacccttggcacaaggttttccacaagaggatgcctcctgaagcaatagacctcgcttcacgccttcttcaatattcaccgagtctccgctgcactgctcttgatgcatgtgcacatcctttctttgatgagctgcgagagccgaatgcacgcttgccaaacggacgtccatttccaccactattcaacttcaaacacgaactagcaaattcttctcaagagctcatcagcaggctcataccagaacatgttcgacggcaagctacccacaacttcttcaatactgggagctaa</cdnaseq>

Protein Sequence

<aaseq>MDQPAPAPEPMLLDAQPPAAVACDKKQQEGEAPYAEGNDAVTGH IISTTIGGKNGEPKRTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN RELQLMRAMDHPNVISLKHCFFSTTSRDELFLNLVMEYVPETLYRVLKHYSNANHRMP LIYVKLYMYQLFRGLAYIHTVPGVCHRDVKPQNVLVDPLTHQVKLCDFGSAKTLVPGE PNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGESAVDQLVEI IKVLGTPTREEIRCMNPNYTEFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSL RCTALDACAHPFFDELREPNARLPNGRPFPPLFNFKHELANSSQELISRLIPEHVRRQ ATHNFFNTGS</aaseq>

Gene Sequence

<dnaseqindica>3383..3475#3170..3271#2563..2646#2283..2378#2145..2195#1891..2031#1487..1543#1331..1405#973..1245#820..879#283..384#117..191#atccctcccagtataagccaaaccaatccatagaggaggaagaggaggaccaggtggtggcacacctaagctttgtgcagtgccattcacgcacctgcagcttccagctttgccacatggaccagccggcgccggcgccggagccgatgctgctcgacgcgcagccgcccgccgccgtcgcctgcgacaaggtatgtgactaaccggatcttggcgtgctgatccgtggttttgcggttctttgctgtgtgctgatttagtgtgctgttcttggtggagcagaagcagcaggagggggaggcgccgtacgcggaggggaatgacgcggtgaccgggcacatcatctccaccaccatcgggggcaagaacggcgagcccaagagggtgagacacgagccttcccccccccccctttgttgttttggtcttggttccatttcttgagttgcagtgaaatgctgccggttcttggtttaggaaggtgttcttgtgtgttctgcagctagtttcttagctccgtgtagtgatttttggtgatgggaaagccattggctctaagagaggcatgtggattagtggtcagattttgcaaaagaagtaaactgttggtagatatcagccaatttatttagtgttagttgttcatgttcttgtattactgcaagatctgttgtaaataactaaatatggcttgtttggtgctcatttttggtggtttgtaggggaaaaagttgggtgtgttggattacattgttgtgaacactagtgctcataattaaattttggtcttaagatggtaattttgtacttgattttcagacaattagctacatggcggagcgcgttgtgggcactggttctttcggtatcgtctttcaggtgattcatctttcagaaagttgttatttgtttctttcttttcgtgctgtcgacttgttggtctgatgtttagcttgctggtttcatgtgtaggctaaatgcttggagacaggagagactgttgccattaagaaggtattgcaggaccgacggtacaagaaccgtgagcttcagcttatgcgcgccatggaccaccccaatgtcatctccctgaagcattgcttcttctcaaccacaagtagggatgagctgttcctcaatcttgtcatggaatatgttccagaaacactctaccgtgtgcttaagcactacagcaatgccaaccaccggatgccacttatctacgtcaagctttacatgtatcaggtgtgtggattgctaatcaatcataaattttgaaatgcctgccttcctgtgtgtctcttctaagtctattctacattggctgcagttatttagggggcttgcgtacattcatactgttccaggggtctgtcatagggatgtgaagccacaaaatgttttggtaggtattcatgatcagattattattttgctatgcgatggcctttgattattggctctgaactcctttcttgcaatacaggtggatcctctaactcatcaagtcaagctctgtgactttgggagcgcaaaaacactggtattggccttttccaccctaaagttttgtaatacgcacacattactttagactttcttttttttaattggactttagacgattcttgctgtagactagtcagttttgaatcttaccatttgttaagttggagctagccctgtgttactgaatcgttcaaagaactcttatatacttggtgaatcttacccctttttttcttcctttttattatgcttgatggaagtttcatggaaattccttagttttacacctttttccaccttattccagatgtttgctacaattgtacttttgataattttgatcttactgtcctaatatccattaatttactattccatcaggtcccaggtgaacccaatatatcatatatatgctcacgctactaccgagcaccggagctcatatttggtgcaactgaatatactacatcaatagatatatggtcagctgggtgtgttcttgcagagctactccttggtcaggttggtttcttttttctatggttgacagatctgcaaacttttggtttagttatttaagcatgatgtcatcactgttgctgtgattttgattatcttgtatttgtttttgctagccattgtttccaggggagagtgcagtcgatcagcttgtagagataattaaggtactgcaagacatgccatgcagttctaattttgctcctactattgagtatgggcatcttctctaaccttgtatgatattcttgcaggttcttggtacaccaacccgtgaggaaatacgttgcatgaacccgaactatacagagtttaggtttccacagataaaagctcacccttggcacaaggtaagcatacaatcttatccatgttgagtcatatatcacgtcatcttttatagtttcctggacaactatgaaaatgtagctgggctcatttccaataatagattctggacaccagatagctttacaatgcaatgtataaataaggaggtgcatacaggtactgatttttctaacttctgcgtaggttttccacaagaggatgcctcctgaagcaatagacctcgcttcacgccttcttcaatattcaccgagtctccgctgcactgctgtgagtatattcttgctgcaattttaagtagcagaacagtagaaaagtgatttttcactactgctcacagcaggggtactgtaaaacgccccttttcttattgctgttatgcaagtttgcctactgtagctggtcatatgagctgttacttttcaccctttaagagttgcacaaatttgagcgtaaccaaggaattttcttaatcactttgccctccaagtgctctttgatttgtgcaactcctgaaatggggtggagtggagaaacactccttgtttctttctcttttttcttttttcctaaagtagattgaagaatgctagtcttcactaactttggttttagtggggcatggccattatggttatgatctttagtggtccattaccaaatcaatgttggggtggatgaatgatagttgtctcatgtttagtcgttattcagtgtaattgcaatagccagatgacaacttaatattgattttttttccgatgtgcttattcatttgaatatctttatgcagcttgatgcatgtgcacatcctttctttgatgagctgcgagagccgaatgcacgcttgccaaacggacgtccatttccaccactattcaacttcaaacacgaagtaagtgaatcagatgaaacataatctgctacacaacttcagatcttggtatccatgagaaaatgtgtactctccttggtgctcattggtgctgccttttggtctctacagctagcaaattcttctcaagagctcatcagcaggctcataccagaacatgttcgacggcaagctacccacaacttcttcaatactgggagctaaaaatgctaaatgcacaccaccagaccttttgttggatcgttttcgcggaaccggtgaagttcacatgaaggctgagtcagatgattcttcgaatccccgcaaaacaagaagaatagaaaatatgattcctcagatgatgatatgcaaatgcttcgttggaagttcaattcaatcatcgaagaagaacaacattgtaaatcgagaagtttttgcatcgcgagtttggtagtgaaaccgggatcagctggtatgacggaggaaaccgaaatgtttagatccatgactgagttttctttcattttttttgcccaattgtaacagaagaatatagttccctaatgtaggcgtagttgtaacctgtaaactgccactgttttgttcacattccatgatgtaaatgccaccatgcctctgatgaataactctccttgtaaccttgttccttccatccttgactgtttaccttaaagccgtggacagtgtacactgtacatgtaccgtgctacacggaaggacatatttgaattttttttctctc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0207500, RefSeq:Os05g0207500