Difference between revisions of "Os05g0317200"
(Created page with "{{JaponicaGene|
GeneName = Os05g0317200|
Description = AMP-dependent synthetase and ligase domain containing protein|
Version = NM_001061712.1 GI:115463154 GeneID:4338395|
...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os05g0317200| | GeneName = Os05g0317200| | ||
Revision as of 20:08, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os05g0317200 |
|---|---|
| Description |
AMP-dependent synthetase and ligase domain containing protein |
| Version |
NM_001061712.1 GI:115463154 GeneID:4338395 |
| Length |
13073 bp |
| Definition |
Oryza sativa Japonica Group Os05g0317200, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 5:14666064..14679136 |
| Sequence Coding Region |
14667491..14668030,14668116..14668196,14670800..14671066,14672079..14672210,14672294..14672467 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008398:14666064..14679136 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008398:14666064..14679136 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgggagaaaatactggcgataatccaaacatgtcaattcttcaaagaattgccacaagtgatgttccactggtgaaagagtatggtctgcctggaattattggtgccattctacttgctgtagttattcctatcatgctttcttccatattcaacaaaaagggaaagaaaagagcagtacaagctgatgtgggtggtgaggcaggacttgccatgcgaaacagtagattttccatgttagttgaagttccatgggagggtgccaccacaatggcagctttatttgagatggctagcaaaaaataccctcgacacaggtgtcttggcacaaggaagctaatcaatagagaatttgtggagtcacctgatggcaggaagttcgagaaattgcatttaggtgaatatgaatgggatacctacgcagaagcatttagtcgtgcatgtaatttttcttctggtctcatcaagttgggtcaccaacgagatagtcgtgctgcaatatttgctgatacaagaactgagtggatcattgctgctcagggatgctttcgacaaaatctaacagttgtaactatctatgcatctcttggcgaggatgcactggtgcattcactgaatgagacacaggtttcaactctgatatgtgattcaaagcaacttaagaagctacctgcaatcagttccaagttgcagagtgttaagcatgttatctatattgaggatgaacctgttgaggctgaggtactcaatcaaatgaagcactggacaacattttcttttggtgaagttgaagaattgggtaaaacatcacatacagatgcaagattaccttcaagcactgatactgcagttattatgtatacaagtggaagtacgggtcttcccaagggtgtaatgattacacatggaaatatggtggccacaactgcagctgtcatgacaatcataccaaaacttggcacaggggatgtttatctggcataccttccgctggctcatgtctttgaactagcagcagagactgtcatgttagcttctggtgctgccattggatatggctcagctctgactatgacagatacatcaaataaaataaagaaggggacaaaaggagatgtttctgcactgaagcctactcttatgatttcagtccctgcaattttagaccgcatcagagatgccgtgtttaaaaaggttggtgagaagggtggtctgaccaaaaagctgtttgacattgcctataaacgaaatcttggagctattgaaggaagttggtttggatcctgggcaccagagaggatgatatgggataacctcatttttaaaccaatacgttccatgcttggtgggcgcattagatttgttctttgtggtggtgcacctctatcgagtgacacacaaagatttatgaatatatgtcttggtgtaccagtaggtcaaggctatggattgacagagacttgtgctggagcagccttttctgaatgggatgacacaagtgtgggccgtgttggtccaccccttccttgttgctatgtcaagctcgtttcatgggaagaaggtggctataaaatttctgattctccaatgccccgaggagaggttgtagttggtggatacagcataacaaaaggttatttcaacaatgaagcaaaaacaaatgaggtctacaaggtagatgagaggggaatgcgctggttttacactggagatattggccagttccatcctgatgggtgcctcgagatcattgatagaaaaaaggatatagtaaaacttcagcatggagaatatgtgtctcttggcaaggttgaatcagctctaactactagcaattatgtggacagcataatggtttatgctgatccatttcataattattgtgtggcgttggtagtgccggcgcaccaggccttagagcagtgggctcaaaattctgggattaactacaaaaactttgatgagctgtgccacaatgatcaagccattaaggaggtccagcaatctctatcaaaggctgcaaaagcagcgaggcttgagaagtttgaaataccagcaaagattgtgttgctgcctgaaccatggactccagagtctgggctggtgacagctgcacttaaactgaagagggagcagataaagaccaaattcaaagatgatctgggcaagctctatcactga</cdnaseq> |
| Protein Sequence |
<aaseq>MGENTGDNPNMSILQRIATSDVPLVKEYGLPGIIGAILLAVVIP IMLSSIFNKKGKKRAVQADVGGEAGLAMRNSRFSMLVEVPWEGATTMAALFEMASKKY PRHRCLGTRKLINREFVESPDGRKFEKLHLGEYEWDTYAEAFSRACNFSSGLIKLGHQ RDSRAAIFADTRTEWIIAAQGCFRQNLTVVTIYASLGEDALVHSLNETQVSTLICDSK QLKKLPAISSKLQSVKHVIYIEDEPVEAEVLNQMKHWTTFSFGEVEELGKTSHTDARL PSSTDTAVIMYTSGSTGLPKGVMITHGNMVATTAAVMTIIPKLGTGDVYLAYLPLAHV FELAAETVMLASGAAIGYGSALTMTDTSNKIKKGTKGDVSALKPTLMISVPAILDRIR DAVFKKVGEKGGLTKKLFDIAYKRNLGAIEGSWFGSWAPERMIWDNLIFKPIRSMLGG RIRFVLCGGAPLSSDTQRFMNICLGVPVGQGYGLTETCAGAAFSEWDDTSVGRVGPPL PCCYVKLVSWEEGGYKISDSPMPRGEVVVGGYSITKGYFNNEAKTNEVYKVDERGMRW FYTGDIGQFHPDGCLEIIDRKKDIVKLQHGEYVSLGKVESALTTSNYVDSIMVYADPF HNYCVALVVPAHQALEQWAQNSGINYKNFDELCHNDQAIKEVQQSLSKAAKAARLEKF EIPAKIVLLPEPWTPESGLVTAALKLKREQIKTKFKDDLGKLYH</aaseq> |
| Gene Sequence |
<dnaseqindica>1428..1967#2053..2133#4737..5003#6016..6147#6231..6404#7974..8203#8878..8995#10861..10992#11071..11205#11303..11509#12581..12745#acttccttcccttggcgtaaaagaaacagaaatctctcgtctcgtcgtctccgctccttgcgccaagacgagtcgcgggtgaacaggggaggggacgccggacgccgatctccatctggcgagcagagcaacggaggggaggtgcgccgatctccatctggcgagcagagcaggggaggggaggggaggggatcggggtgagcatccacatcctctttctgattcatctctctctcccaccgggagtacttttgcctggaatttgctcgcgttaaccctagcttctattctagatctttcttaatttgtttgctcccccaaaagtttgagcccccatgtcccaagtttgatccgcccctgatttcctttgatcccacgcacagactatgctgctgtacagagtaaggaataattataactttaaccgtttaattaatgtccctattcaatggttcttcctcaagcctcaattattcctctcctaccgctgctaatttgcacaaagtggttgtttactttactccttgtttcttaggtgagatcatgttatcttttttttttcttcaaatgtaaatccgtgtccctttgtaattgcttgcaacttcgaaggaccttgccataagatattggccctttgagcaaaccagagatggatgctatattttattgaattatcttctctacaagtcttcaacttgtcataagattcctgctaatctacttactccacttacaaaatatttctgtcaacttcgttgcttcgtgctgaatcttacatatcatcttgactgctaacctgttgtgatagtgctgttgcttccacgagtcagcttgtaatgttgagtcgttctcactgtagaagtaggcaactgcaggattcacaagcaatttcattattgtactttttagcaacttaagttgacctttgggaattttgttgtcatcataaaataatttgtgcggtgctctgagcaataccatttaacattcactggagatgcggatatgttatttactcaaagagattaaaactaccaagtatttactgttttactgcactttacagttttttgctctgcataacaaggctgtctaatagctgctgaatctgtttataccatacgatcatttttaattttgttagttggaagaagagtaccagtgcttctaaatattgttcattgctagtatttttcatttttccatgattcataatgttaaatagaatgctactgtagtgcgaaagcattctccatgctgcactaatctagttatactcatttcttctgttcaaggcaattatttataaaattgagaagaaattagttattacttatttgcaacatactaacatgacggttattaacactttatactttcttgtagcgaaatttgtgaaatctttcagttgatgaaatcttaaaatcatgggagaaaatactggcgataatccaaacatgtcaattcttcaaagaattgccacaagtgatgttccactggtgaaagagtatggtctgcctggaattattggtgccattctacttgctgtagttattcctatcatgctttcttccatattcaacaaaaagggaaagaaaagagcagtacaagctgatgtgggtggtgaggcaggacttgccatgcgaaacagtagattttccatgttagttgaagttccatgggagggtgccaccacaatggcagctttatttgagatggctagcaaaaaataccctcgacacaggtgtcttggcacaaggaagctaatcaatagagaatttgtggagtcacctgatggcaggaagttcgagaaattgcatttaggtgaatatgaatgggatacctacgcagaagcatttagtcgtgcatgtaatttttcttctggtctcatcaagttgggtcaccaacgagatagtcgtgctgcaatatttgctgatacaagaactgagtggatcattgctgctcaggtgattataataaatagtgtggctttctgtatacatttgtgagaacctatgaacctgtatgacaataattgttttattttgtcagggatgctttcgacaaaatctaacagttgtaactatctatgcatctcttggcgaggatgcactggtgcattcactgaatgaggtacaacccatatgtggcttttttgtgcagtatttatgttcattcttataattatccacttgggaaactagtacattcctaccgtttcttttttttctttatatatgggtaattttacacattttattgaagtatgggtcatccttatatgtcagcaacttttaagattttgggcgaactgtttggtggatgaaatgtaataccgaagcttgtatggtagttcatgttgttgatatgatactatttttgtctgtttggtttacattgtttaatcagtttattacctgtcttgcctaaactatcttcattagttggttgttcttgagagaaatctttaccagtatgaacattcaagcaataaccatgcaaattgtttcccaaggcttaaaaaactctatgagaagattttttttttccgaatacgcatgggatctgcgtatcatttcattaagcaagaataaagaggcaagcggtgaaggatttagcaaacctcagcacccacctaccaaggttatacaaaacaataacacctcacaaaaacacacaaaacatcaagcacgcgcttcgacctcctatggtacaggagctattgctttcgcaaatagctcttggagttttgatgctcccacaaaacaccaaagtgcaccctcattagctatggcttggattgccacaggcacactatgcgtagctctattgaaaacacaatcatttatatgtttccaaatttcccagatggctaagatgactagcgaattgagccccttcttctcattcttctgtaagcctttcactgtccttgaccaccaactcgaaaacttacgtgtatcctgattcggaagtgtggaggagaaaccaagcctttgcaggaccaaggaccaaacttgtcgactgaacacacaggaaaccaagatgtgctgtatcgtctcgtcggcctgatcataaagcggacaagcgtcccggtgaggcaagcctcgctttgcaagtcgatccgccgtccaacatctgttgtaaatggccaaccacacaaaaaacttacacttaagaggagcccaactattccaaatccttttccaaggagcaaaacggacagtcccaacaaagaaggccctgtaggcagacttggaagtgtaggaccctgagtctgttagtttccaaacatgctgatccgggacgccttcttgcagccctataccaaaaactgagtcccatatctggagatactcattaatcacttgcacagtcaagggcccttttatgtccgtgatccatttcccgttattgagagcgtgagccactgtacaacgtttaaccaccctcttagcgaccaacatacacagattaggggccatttttaagatattccttcctagtaaccacctatcagtccaaaacaaagtagactgcccattcccaactcgtgattcaacagccacactgaagagattatgagacatgcgaggaacctggatgggtaggccttgccacgcacggtcactatctgtcttctggagccataaccaacggatacgtagtgcccaactcaggcggagaggaccacccgcaccaagatgagtcgaccggccttgttcatgagggaggccttccacattgggaggtaatctgctaccttatcaacaggagcttgcaacttggctttagaaggcttcttaatgttcagcggcaagcccaaatatgaacaaggaaaatccttgacctcacatggcagcatgttagaaatcactttcaactcatcctcattgcacctaatgggagttatcgagcttttctgcatgttagtcacaagtcctgaagcatgaccaaaaatatcaagaacctgtgtgataactgagagatcgtcagctgttggcctagagaacaagaccacattatcagcaaaaaaggagcatcgctgctgcgtttgccgaaaagcaagaggttgcaaccatccttcttgggccacccaatcaactagtgagctgagaacatccatgactagaataaaaagcatcggggacaatggatcaccttgccgaaggccgcggcggtgcagaatcacctcctcaggctccccattgattagaacccgagtagaagaggtagacagcagcaaacaaagtaggttgcaccaaaaacgaccaaaatccaactgttgtagaacctccaaaagagaaggccaagaaactgagtcaaaagccttagatatatccagcttcaacagaacatgtgattcttttcttgcatgcaaacacttggccatttgctgcacaaggaagaaattatcatggatacttctccctttgataaaagcactttgattaatagaaaccatactaggaagcagcggagcaagacggtttgccaagatctttgaaaccaacatcgcaaaactgtgaatgaggcttatggagcgaaaatctttaactctacaagcatccacctgttttggtaagagagttataaaggcagagttcaacttcttgaattttgacacatgtccatgctgaattgccgttagtagatggttacactttagaagagttaaatgacagcaaccattagtagatgggaaactcattttttttgtgtgttataaatttcagacacaggtttcaactctgatatgtgattcaaagcaacttaagaagctacctgcaatcagttccaagttgcagagtgttaagcatgttatctatattgaggatgaacctgttgaggctgagg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