Difference between revisions of "Os05g0399400"

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(Created page with "{{JaponicaGene| GeneName = Os05g0399400| Description = Similar to Endochitinase precursor (EC 3.2.1.14)| Version = NM_001062012.1 GI:115463754 GeneID:4338719| Length = 109...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os05g0399400|
 
GeneName = Os05g0399400|

Revision as of 20:09, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os05g0399400

Description

Similar to Endochitinase precursor (EC 3.2.1.14)

Version

NM_001062012.1 GI:115463754 GeneID:4338719

Length

1095 bp

Definition

Oryza sativa Japonica Group Os05g0399400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:19442214..19443308

Sequence Coding Region

19442214..19442827,19442918..19443308

Expression

GEO Profiles:Os05g0399400

Genome Context

<gbrowseImage1> name=NC_008398:19442214..19443308 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:19442214..19443308 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaaagccacgacgacagcagtggccctcctcgtggccgccgcggccatggcggcgcaggtagtcgccgagcagtgtggctcgcaggccggtggggcgctgtgcccgaactgcctctgctgcagctcctacggctggtgcggctccacttccgactactgcggcgacggctgccagagccagtgcgacggctgcggcggcggaggtggcggcggtggcggcgggggcggcggtggaggtgggggtggcggcgcggtggaggcggtcgtgtcgaaggagctcttcgagcagctgctgctccaccgcaacgacgcggcgtgccccgccagagggttctacacctacgacgccttagtcaccgccgccgccgcgttcccggacttcgccgcgacgggcgacgacgaggcgcgcaagcgtgaggtcgccgcgttcctcgggcagacctcccacgagaccacgggcgggtgggcgaccgcgcccgacggcccctactcgtggggctactgcttcaaggaggagatcggcgccacggcctcctactgcgtccccagcgccgagtggccgtgcgccccggacaagaagtacttcggccgcggccccatccaactctcctacaactacaactacgggccggcgggagaggccatcggcgaggacctcctgaacaacccggagctggtggcgtcggacccggtggtgtcgttcaagacggcgctgtggttctggatgacgccgcagtcgccgaagccgtcgtgccacgacgtgatcacggggcagtggacgccgagctcgggggacatcgcggccgggcgggtgccggggtacggcgtgatcaccaacatcatcaacggcgggttggagtgcgggttcggccccgacgaccgggtggcgaaccggatcggcttctaccagcgctactgcgacgtgctcggcatcggctacgggagcaacctcgactgctacgaccagaggccgttcaacagcgggttgacggcggcgcagtga</cdnaseq>

Protein Sequence

<aaseq>MKATTTAVALLVAAAAMAAQVVAEQCGSQAGGALCPNCLCCSSY GWCGSTSDYCGDGCQSQCDGCGGGGGGGGGGGGGGGGGGGAVEAVVSKELFEQLLLHR NDAACPARGFYTYDALVTAAAAFPDFAATGDDEARKREVAAFLGQTSHETTGGWATAP DGPYSWGYCFKEEIGATASYCVPSAEWPCAPDKKYFGRGPIQLSYNYNYGPAGEAIGE DLLNNPELVASDPVVSFKTALWFWMTPQSPKPSCHDVITGQWTPSSGDIAAGRVPGYG VITNIINGGLECGFGPDDRVANRIGFYQRYCDVLGIGYGSNLDCYDQRPFNSGLTAAQ </aaseq>

Gene Sequence

<dnaseqindica>1..614#705..1095#atgaaagccacgacgacagcagtggccctcctcgtggccgccgcggccatggcggcgcaggtagtcgccgagcagtgtggctcgcaggccggtggggcgctgtgcccgaactgcctctgctgcagctcctacggctggtgcggctccacttccgactactgcggcgacggctgccagagccagtgcgacggctgcggcggcggaggtggcggcggtggcggcgggggcggcggtggaggtgggggtggcggcgcggtggaggcggtcgtgtcgaaggagctcttcgagcagctgctgctccaccgcaacgacgcggcgtgccccgccagagggttctacacctacgacgccttagtcaccgccgccgccgcgttcccggacttcgccgcgacgggcgacgacgaggcgcgcaagcgtgaggtcgccgcgttcctcgggcagacctcccacgagaccacgggcgggtgggcgaccgcgcccgacggcccctactcgtggggctactgcttcaaggaggagatcggcgccacggcctcctactgcgtccccagcgccgagtggccgtgcgccccggacaagaagtacttcggccgcggccccatccaactctcctagtaagcacatcaaagctaggttcaattttttttatcaaattctcagcgcgataagaatggttttgaacttttgatcgatcgatctctcagcaactacaactacgggccggcgggagaggccatcggcgaggacctcctgaacaacccggagctggtggcgtcggacccggtggtgtcgttcaagacggcgctgtggttctggatgacgccgcagtcgccgaagccgtcgtgccacgacgtgatcacggggcagtggacgccgagctcgggggacatcgcggccgggcgggtgccggggtacggcgtgatcaccaacatcatcaacggcgggttggagtgcgggttcggccccgacgaccgggtggcgaaccggatcggcttctaccagcgctactgcgacgtgctcggcatcggctacgggagcaacctcgactgctacgaccagaggccgttcaacagcgggttgacggcggcgcagtga</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0399400, RefSeq:Os05g0399400