Difference between revisions of "Os05g0403000"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os05g0403000| Description = Peptidase aspartic, catalytic domain containing protein| Version = NM_001187490.1 GI:297724110 GeneID:9270164| Lengt...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os05g0403000|
 
GeneName = Os05g0403000|

Revision as of 20:10, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os05g0403000

Description

Peptidase aspartic, catalytic domain containing protein

Version

NM_001187490.1 GI:297724110 GeneID:9270164

Length

1550 bp

Definition

Oryza sativa Japonica Group Os05g0403000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:19641276..19642825

Sequence Coding Region

19641314..19642627

Expression

GEO Profiles:Os05g0403000

Genome Context

<gbrowseImage1> name=NC_008398:19641276..19642825 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:19641276..19642825 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcacgctttcctcctcctctcgcttccggcgctctcctcctcctgctcttcgtcttggtctcgccgtgccgctcggcggcaggaggccggccgagagccgtggtgctgccggtgagcaaggacgacgcgacgcagcagtacgcgacggtgttccggcagcggacgccgcaggtgcccgtgaaggccgtgctggacctcgcgggcgccacgctctgggtggactgcgataccgggtacgtgtcgtcgtcctacgcgcgtgtcccgtgcgggtccaagccgtgccgcctcaccaagaccggcggctgcttcaacagctgcttcggcgcgccatccccggcctgcctcaacggcacctgcagcgggttcccggataacacggtcacgcgcgtcacggctggcggcaacatcatcaccgacgtgctctcgctgcccaccaccttccgcaccgcgccggggccgttcgccaccgtgccggagttcttgttcacctgtggccacacgttcttgaccgagggcctcgctaacggcgccaccggcatggtgtccctcagccgcgcccgcttcgcgttccccacgcagctcgcccgaaccttcggcttctcccgcaggttcgcgctctgtctcccgccggcctccgcagctggcgtcgtcgtatttggcgacgcgccttacgtgttccagcccggcgtggacctctccaagtcgtcgctcatctacacgcctctgctcgtcaacgcggtgagaacggcggggaagtacacaacgggggagacgtcgatcgagtacctcatcggcttgacgggcatcaaggtgaacggccgcgacgtgccactgaacgcgacgctcttggcaatcgacaagaatggcgtaggcggcaccacgctgagcacggcgtctccttacaccgtgctggagacctccatctacaaggcggtcatcgacgcgttcgcggccgagacggccacgatcccccgtgtgccggccgtggcaccgttcgagctgtgctacgacgggcgcaaagtagggagcacccgcgcggggccagcggtgccgacgattgagctggtgctgcagagggaggccgtgtcgtggatcatgtacggggcaaactcgatggtgcccgccaagggcggcgcgctctgccttggcgtggtggacggcggccccgcgctgtatccgtcatcggtggtgatcggcgggcacatgatggaggacaacctgctggagtttgacctggaggggtcgcggctgggtttcagctcctacctcccgttgcggcagacgacctgcaacaactttcgcctcggctag</cdnaseq>

Protein Sequence

<aaseq>MARFPPPLASGALLLLLFVLVSPCRSAAGGRPRAVVLPVSKDDA TQQYATVFRQRTPQVPVKAVLDLAGATLWVDCDTGYVSSSYARVPCGSKPCRLTKTGG CFNSCFGAPSPACLNGTCSGFPDNTVTRVTAGGNIITDVLSLPTTFRTAPGPFATVPE FLFTCGHTFLTEGLANGATGMVSLSRARFAFPTQLARTFGFSRRFALCLPPASAAGVV VFGDAPYVFQPGVDLSKSSLIYTPLLVNAVRTAGKYTTGETSIEYLIGLTGIKVNGRD VPLNATLLAIDKNGVGGTTLSTASPYTVLETSIYKAVIDAFAAETATIPRVPAVAPFE LCYDGRKVGSTRAGPAVPTIELVLQREAVSWIMYGANSMVPAKGGALCLGVVDGGPAL YPSSVVIGGHMMEDNLLEFDLEGSRLGFSSYLPLRQTTCNNFRLG</aaseq>

Gene Sequence

<dnaseqindica>39..1352#acaccccatcggaatatcgcatccttcctctcagaagaatggcacgctttcctcctcctctcgcttccggcgctctcctcctcctgctcttcgtcttggtctcgccgtgccgctcggcggcaggaggccggccgagagccgtggtgctgccggtgagcaaggacgacgcgacgcagcagtacgcgacggtgttccggcagcggacgccgcaggtgcccgtgaaggccgtgctggacctcgcgggcgccacgctctgggtggactgcgataccgggtacgtgtcgtcgtcctacgcgcgtgtcccgtgcgggtccaagccgtgccgcctcaccaagaccggcggctgcttcaacagctgcttcggcgcgccatccccggcctgcctcaacggcacctgcagcgggttcccggataacacggtcacgcgcgtcacggctggcggcaacatcatcaccgacgtgctctcgctgcccaccaccttccgcaccgcgccggggccgttcgccaccgtgccggagttcttgttcacctgtggccacacgttcttgaccgagggcctcgctaacggcgccaccggcatggtgtccctcagccgcgcccgcttcgcgttccccacgcagctcgcccgaaccttcggcttctcccgcaggttcgcgctctgtctcccgccggcctccgcagctggcgtcgtcgtatttggcgacgcgccttacgtgttccagcccggcgtggacctctccaagtcgtcgctcatctacacgcctctgctcgtcaacgcggtgagaacggcggggaagtacacaacgggggagacgtcgatcgagtacctcatcggcttgacgggcatcaaggtgaacggccgcgacgtgccactgaacgcgacgctcttggcaatcgacaagaatggcgtaggcggcaccacgctgagcacggcgtctccttacaccgtgctggagacctccatctacaaggcggtcatcgacgcgttcgcggccgagacggccacgatcccccgtgtgccggccgtggcaccgttcgagctgtgctacgacgggcgcaaagtagggagcacccgcgcggggccagcggtgccgacgattgagctggtgctgcagagggaggccgtgtcgtggatcatgtacggggcaaactcgatggtgcccgccaagggcggcgcgctctgccttggcgtggtggacggcggccccgcgctgtatccgtcatcggtggtgatcggcgggcacatgatggaggacaacctgctggagtttgacctggaggggtcgcggctgggtttcagctcctacctcccgttgcggcagacgacctgcaacaactttcgcctcggctagcagatagcaatactgtgggcaacctgtagtagccatggacccatggtagctaatactatcaactagtacctacatttctaattttccctttctactttgttgttagaattgctcatgaaccgccagatgccgtatccacgcatccacggtttctgatcgcctattcggacaatgatttaaaagttgattgttttttcc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0403000, RefSeq:Os05g0403000