Difference between revisions of "Os05g0413200"

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(Created page with "{{JaponicaGene| GeneName = Os05g0413200| Description = Beta-tubulin| Version = NM_001062081.1 GI:115463892 GeneID:4338790| Length = 3145 bp| Definition = Oryza sativa Jap...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os05g0413200|
 
GeneName = Os05g0413200|

Revision as of 20:10, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os05g0413200

Description

Beta-tubulin

Version

NM_001062081.1 GI:115463892 GeneID:4338790

Length

3145 bp

Definition

Oryza sativa Japonica Group Os05g0413200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:20210948..20214092

Sequence Coding Region

20211482..20211875,20211977..20212246,20213235..20213905

Expression

GEO Profiles:Os05g0413200

Genome Context

<gbrowseImage1> name=NC_008398:20210948..20214092 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:20210948..20214092 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagggagatcttgcacatccagggcgggcagtgcgggaaccagatcgggtccaagttctgggaggtggtgtgcgacgagcatggcatcgacccgacggggaggtacgccggcacgtcggacctgcagctggagcgcgtgaacgtctactacaacgaggcgtcgtgcggccggttcgtgccgcgcgccgtgctcatggacctggagccgggcaccatggactccgtccgcacggggccctacggccagatcttccgtcccgacaacttcgtcttcggccagtccggcgccggcaacaactgggccaagggccactacaccgagggcgccgagctcatcgactccgtcctcgacgtcgtccgcaaggaggccgagaattgcgactgcctccaaggtttccaggtgtgccactcgctgggcggcggcacgggctccggcatgggcaccctgctgatctccaagatcagggaggagtacccggacaggatgatgctcaccttctccgtgttcccgtcgcccaaggtgtcggacaccgtggtggagccctacaacgccacgctctcggtccaccagctcgtggagaacgccgacgagtgcatggtgctcgacaacgaggcgctctatgacatctgcttccgcaccctcaagctgacgactcccagctttggtgatctgaaccacttgattagtgccaccatgagcggtgtcacctgctgcctgcgcttcccagggcagctgaactccgacctccgcaagctcgccgtcaacctgatccccttcccgcggctccacttcttcatggtgggcttcgcgccgctcacctcacgcggctcgcagcagtaccgcgccctcactgtccctgagctcacccagcagatgtgggacgccaagaacatgatgtgcgccgccgacccgcgccacggccgctacctgacggcctcggccatgttccgcggcaagatgagcaccaaggaggtggacgagcagatgatcaacgtgcagaacaagaactcgtcctacttcgtggagtggatccccaacaacgtcaagtcgagcgtgtgtgacatcccgccgcgcggcctctccatggcgtctacgttcgtcggcaactccacctccatccaggagatgttccgccgcgtcagcgagcagttcacggccatgttcaggaggaaggcgttcttgcactggtacacgggcgagggcatggacgagatggagttcaccgaggcggagagcaacatgaacgacctcgtctccgagtaccagcagtatcaggacgccaccgccgacgaggccgagtacgaggaagaagaggacgcgatacaggagtag</cdnaseq>

Protein Sequence

<aaseq>MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYAGTSDLQL ERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWA KGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYP DRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLT TPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSR GSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQ NKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFVGNSTSIQEMFRRVSEQFTAMFRRK AFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATADEAEYEEEEDAIQE</aaseq>

Gene Sequence

<dnaseqindica>535..928#1030..1299#2288..2958#acacactctcccatcccaacctctcccaaaattagccccgatccgatcgcttcctagccctgattcgaggtgaattccgcaacaaaaaatctttcgattcgcttccccccgaattatctagcgcctcgtgctttccggtgaatttttttttgggtccgatcgattctttttttttttttttggggggggggggggttgggtggattattgaggatttgaggtgttcttggtgcgatcggaacatttttggttcgtttgtttggggattcttgcggtgttctgggtagaatcaggactagctgttcttctcggtgttccgatcgtttggggattagtgaggatttgaggtgttcttggtgcgatcagaagatttttggttcgtttttttttctctttcggattcttgcggtgttcttggtagaatcagtactctcggtgttccgattcccgcgttggaatttcagaaggtctcacccaccctgacgtttcgcgtttcgtggcgatttctctgcaggtaaaaaaggggaggagaagatgagggagatcttgcacatccagggcgggcagtgcgggaaccagatcgggtccaagttctgggaggtggtgtgcgacgagcatggcatcgacccgacggggaggtacgccggcacgtcggacctgcagctggagcgcgtgaacgtctactacaacgaggcgtcgtgcggccggttcgtgccgcgcgccgtgctcatggacctggagccgggcaccatggactccgtccgcacggggccctacggccagatcttccgtcccgacaacttcgtcttcggccagtccggcgccggcaacaactgggccaagggccactacaccgagggcgccgagctcatcgactccgtcctcgacgtcgtccgcaaggaggccgagaattgcgactgcctccaaggtatcatcatcatcataccatcacccccactatctgtttcgtttcttgaattcttttccatggaatccggtggtcgatcgagctctgcttccggtggtcaggtttccaggtgtgccactcgctgggcggcggcacgggctccggcatgggcaccctgctgatctccaagatcagggaggagtacccggacaggatgatgctcaccttctccgtgttcccgtcgcccaaggtgtcggacaccgtggtggagccctacaacgccacgctctcggtccaccagctcgtggagaacgccgacgagtgcatggtgctcgacaacgaggcgctctatgacatctgcttccgcaccctcaagctgacgactcccagctgtgagcatatccctgccattgatacctgttcttttgttatactactaagttttactgaattagattatcatttctgcaatattatgagaaatttcagttcactaagtcatcttgaagtgctttgtgctttatgaaaaaggtcgttgtatgtcattttcgtttcactagtgcgaaactactgcttcacatatccaaaatgttgtgaggagcttaatcatcttaattaggtgatgccagctgacttagtttggttccttgtaaaggattattagtgttggattcgtttataccattatatgtagttggtgtgcttgacttgtttatccaaccaaccaccagtttaaatgagctgactgaactaaatctcatcaaatctcttaggccgagtttagttccaaactttttcttcaaacttccaacttttccatcacatcaaaactttcatacacacaaacttccaacttttccgttacatcgttccaatttcaaccaaacttccaattttggtgtgaactaaacatacccttagtacataagttttgccttgtagttgaaataataactgcacttattccacatactgtgttacataaagggagtatgaactgttaaatgttactagaaggtctgatgctgggtatgacttgagggttgttttctgcaccattttccatatcgctaatacttctgtagcttggagttggggcatgttttccagcataagaatgatatccccttaattagaaatgtgtggtaatgaaaattcttgtagtgtcaactgaaaccaaaacatcagttcagttctgaacttctaaattctaaaagcaaacatgctactactttatttaatttgttttttctgctgatgtattcttttggtgatcttttatctagtaacatttgttatgattaaaagccaagctgatatgtttacttattaggctcttgctgtgctactgctcatctgaatcttgatttttgcggacagttggtgatctgaaccacttgattagtgccaccatgagcggtgtcacctgctgcctgcgcttcccagggcagctgaactccgacctccgcaagctcgccgtcaacctgatccccttcccgcggctccacttcttcatggtgggcttcgcgccgctcacctcacgcggctcgcagcagtaccgcgccctcactgtccctgagctcacccagcagatgtgggacgccaagaacatgatgtgcgccgccgacccgcgccacggccgctacctgacggcctcggccatgttccgcggcaagatgagcaccaaggaggtggacgagcagatgatcaacgtgcagaacaagaactcgtcctacttcgtggagtggatccccaacaacgtcaagtcgagcgtgtgtgacatcccgccgcgcggcctctccatggcgtctacgttcgtcggcaactccacctccatccaggagatgttccgccgcgtcagcgagcagttcacggccatgttcaggaggaaggcgttcttgcactggtacacgggcgagggcatggacgagatggagttcaccgaggcggagagcaacatgaacgacctcgtctccgagtaccagcagtatcaggacgccaccgccgacgaggccgagtacgaggaagaagaggacgcgatacaggagtagagactgtctgggcaatggtacctcgtatcccctgcccatcgttaccctaatatgtttgcctgaacatcatcgcagttgcatcaccatagctacctccgcaccttaaaatttgatgcttgtttgtatgctatcgcgtgtatcaggagtgcgtactggttccgtatgctaaagtcttggctattgatgt</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0413200, RefSeq:Os05g0413200