Difference between revisions of "Os05g0460800"

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(Created page with "{{JaponicaGene| GeneName = Os05g0460800| Description = Protein tyrosine phosphatase-like protein, PTPLA family protein| Version = NM_001062294.1 GI:115464318 GeneID:4339019...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os05g0460800|
 
GeneName = Os05g0460800|

Revision as of 20:11, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os05g0460800

Description

Protein tyrosine phosphatase-like protein, PTPLA family protein

Version

NM_001062294.1 GI:115464318 GeneID:4339019

Length

2923 bp

Definition

Oryza sativa Japonica Group Os05g0460800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:22678997..22681919

Sequence Coding Region

22679128..22679235,22679370..22679467,22679572..22679621,22680266..22680333,22680917..22680970
,22681266..22681354,22681441..22681488,22681612..22681697,22681801..22681859

Expression

GEO Profiles:Os05g0460800

Genome Context

<gbrowseImage1> name=NC_008398:22678997..22681919 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:22678997..22681919 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctcgcccgtcgcagctctacctcctctcctacaactccgtccaggccctcggatggttcgtcgccttgctccgcctgctgccctgcctcgcccctccctcctccgtccactcgtcatacgccgtcgccggcgacctcgtatgcttgctgcagacgtgggcgattcttgaaacgatccatgccgccatcggattggtgcacacgtcgccgcttcttgccttcttgcagtggggagggaggactcacttcgttctcgctgtggttcggcaaatccccgaggttcagagtagcccttccgtgttcataacgttcatggcttggagcatatctgaggtcatcagatactcacattatgctctgacaaccttaaaagtttgtccaccatggctaacatatctcaggtacactgcctttataccgctgtatccaattggagtaggcccaggagaaatgtggactatgtaccaagctctcccatttgtgaaggagaggaaactctactctggcttctttgggaagttctccatgagctaccattccttcctagtggctgtgctggcagtctacccgtttctgtggatgaagctgtacctgcatgtgttcaagcagcgcaggtcgaagctggggaaatcgggaggcgccaagaaacgagcctga</cdnaseq>

Protein Sequence

<aaseq>MARPSQLYLLSYNSVQALGWFVALLRLLPCLAPPSSVHSSYAVA GDLVCLLQTWAILETIHAAIGLVHTSPLLAFLQWGGRTHFVLAVVRQIPEVQSSPSVF ITFMAWSISEVIRYSHYALTTLKVCPPWLTYLRYTAFIPLYPIGVGPGEMWTMYQALP FVKERKLYSGFFGKFSMSYHSFLVAVLAVYPFLWMKLYLHVFKQRRSKLGKSGGAKKR A</aaseq>

Gene Sequence

<dnaseqindica>2685..2792#2453..2550#2299..2348#1587..1654#950..1003#566..654#432..479#223..308#61..119#agccacagaaaatcccattgccagtagccacggcaagcacactgcagcagtgcagccgccatggctcgcccgtcgcagctctacctcctctcctacaactccgtccaggccctcggatggtactccacccgcagccgagaagttcgctgcgttcgtgcgtccaatccctcgtttcgctctgattttttcttttttttttctttttggcttcctcctctgcaggttcgtcgccttgctccgcctgctgccctgcctcgcccctccctcctccgtccactcgtcatacgccgtcgccggcgacctcgtatgtgcgtgtatccctcctccgtgcccttcctcgtatgtctttgatttggtctcgtctcgacgagcggagggagtgatgtttttcttttcccccttcttggggattcgtttcttgttgtttcaaggcttgctgcagacgtgggcgattcttgaaacgatccatgccgccatcggtgggttgattgagccgctgaattcctcgcgcgccgctctctttgatgtgaaatttgacgaggagattcgttgctgtttgattcaggattggtgcacacgtcgccgcttcttgccttcttgcagtggggagggaggactcacttcgttctcgctgtggttcggcaaatccccgaggtggggaggactgcaaatttctgcttcgtttggaacggatgaattttgcgggattcttggaggaattgaacaaattcatgtgaaaatcccgtagaatttgtgttttttattttgtcatgtgtaaatggaagagccaaccgcaaaaacgaatttgcacttcgacctagtgaagaaggaaatttcttccttattataaaatttccaatgatacattttctgttattacctttttacagtagtgcctctcaaggtttcaacttaggtttactaatttagtctcctgtgccaaatgcaggttcagagtagcccttccgtgttcataacgttcatggcttggagcatatctgaggtgtggcacaaaatgatactacatcattttctcctctttttgtggtttgccttgttctcataaaaacaatactgatgctttttgagtacattaaaaaatgattttctatgatgcaatctcatgatataacgagaaatttctggtggaaccttctcaggatgcacatattttgtttctattttactgcacaatgatctatgccaatggagctaatattatttcacctgtttcattcatattaaaatgtcaattacgtgttgaaagggatgatctgacaactacgtttagctgttaagaggataagttgagctggtactactgcctaaggaaatgctagcatgaatagaactgtctgtgcatgtaccaactgaaatccacgacagacaaatatgtttccaagttctatgacacgaaaatacccttttactaacctccgtgcatgtgaacgaaaagcattatttaggcatctacattttggtttaactcaatggtactcagtacttaccttattttgaaataattcgcaagacaatgctatttttgttcagtcttttatctgaagtctaatttcttcatggtgcaggtcatcagatactcacattatgctctgacaaccttaaaagtttgtccaccatggctaacatatctcaggtttgatttgcaaatgaactccagttcccacatccaaggatgcatccacagtattttcttagtagcttctcttaggctcggtgcccagtacacctcttgttttccactattttctggttgttttctattgtttttggtagaaagttacacaattctccattcttcaaaaatatttttggtcacaggtcatttttattttccgtttaaagacaccttgcactgaaaccagcataggaagcagaaagatggacacagtatcatggttgttttaccttctgtcttctaaaagaagttgtaaaattgcaaacttgttgttcaaattacaataaccgtattgagtaagctacagaaagatcactgagctggaactattaactgggatattaaaatgaatcaccatgcatgtcatttttatatccaggttcatctaatattgttcctactccaaaatcgccagtacatcgctgctatgttgattttgtttctttacatgatataataatggatcacaatgtttaactgcagtactactgttgcttaccagtccctagttttaccgcgctgcttatggtcttttttccaggtgactgctgttctcctgatcagagactaattaaccctttctacttatttgcaccatgtaggtacactgcctttataccgctgtatccaattggagtaggcccaggagaaagtaagccaattccaaaattctcacccaccaaacttcccctctctttacacctactaatcttgcagtcttttgctgtaaatatacttttcttgccatctccgcagtgtggactatgtaccaagctctcccatttgtgaaggagaggaaactctactctggcttctttgggaagttctccatgagctaccattccttcctagtggtaggtcaagccatagcctgtgaatgtctgatgaaactgaaacatttttttcagataatgtgatgaaactgaagcatgcaacactgctgatggaaatgcaattcgatcgctagctgaccttcctcatgctgcaggctgtgctggcagtctacccgtttctgtggatgaagctgtacctgcatgtgttcaagcagcgcaggtcgaagctggggaaatcgggaggcgccaagaaacgagcctgaagaaaccagctccgtctcgatgctcatacatagtagtacatgatccctttttgaaatttctctttgtttatttatttacgagaaagcatgtactcatgattctgattataatggctaaaacattaagcgcg</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0460800, RefSeq:Os05g0460800