Difference between revisions of "Os05g0507300"

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(Created page with "{{JaponicaGene| GeneName = Os05g0507300| Description = Similar to Calreticulin 3 (Fragment)| Version = NM_001062526.1 GI:115464782 GeneID:4339262| Length = 3687 bp| Defin...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os05g0507300|
 
GeneName = Os05g0507300|

Revision as of 20:12, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os05g0507300

Description

Similar to Calreticulin 3 (Fragment)

Version

NM_001062526.1 GI:115464782 GeneID:4339262

Length

3687 bp

Definition

Oryza sativa Japonica Group Os05g0507300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:25116580..25120266

Sequence Coding Region

25116582..25116618,25116793..25116985,25117445..25117703,25117789..25117845,25117923..25117970
,25118278..25118364,25118438..25118495,25118637..25118704,25118832..25118927
,25119036..25119092,25119214..25119303,25119737..25119763,25119865..25119876

Expression

GEO Profiles:Os05g0507300

Genome Context

<gbrowseImage1> name=NC_008398:25116580..25120266 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:25116580..25120266 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>acagcagggagctattctggagatcctgacgatagaggtatacaaacaacctcggatgctaagcattttgctatatcggccaagttcccagaattcagtaacaagaaccggacattggtggttcagtattcgataaagattgagcaggatattgaatgtggtggtgcttatatcaagcttatgtctggctatgtgaatcagaagaaatttggcggtgacactccttatagcttcatgtttgggcctgatatatgtggtgatcagacaaagaaactccatctgatactgtcttaccaagggcaaaactaccctataaagaaagatctgaaatgtgaaactgacaagttgacacatttttacacattcattcttaggccagatgcctcttatagtctacttgttgataaccgggagagagaatttggtagtatgtacactgactgggacatcctccctcctcgcaagatcaaagaatctaatgcgaagaagccaaaagattgggatgacagggaatatattgaagatcctgatgaagttaaaccagagggctatgactctattcctaaagagattcctgatccaaaggacaaaaagcctgagtcatgggatgatgatgatgatggtgtatggaagcctagaatgataccgaatccagaatacaagggacgttggaaacgcaagaaaattaagaaccctaactacaagggaaaatggaagatcccatggattgataatccagaatttgaggacgacccagacctatatgtgctgaaacctttgcagtatgtgggaattgaggtttggcaggtgaaagctggttcagtttttgacaacattttgatttgtgacgacccggagtatgcaagaagtgttgttgatgaagttagggctgcaaataaagaggctgaaaaggaggccttcgaggaggctgaaaagcggaggaaggctagagaagacgaggaggctcggcgtgcacgagaggaaggagagaaacgaagaagagacagggatcggcaccgaggcagggaccgttacagggatagatatagaggtcatcatcgtaggtatgactaccatgacgagctatga</cdnaseq>

Protein Sequence

<aaseq>TAGSYSGDPDDRGIQTTSDAKHFAISAKFPEFSNKNRTLVVQYS IKIEQDIECGGAYIKLMSGYVNQKKFGGDTPYSFMFGPDICGDQTKKLHLILSYQGQN YPIKKDLKCETDKLTHFYTFILRPDASYSLLVDNREREFGSMYTDWDILPPRKIKESN AKKPKDWDDREYIEDPDEVKPEGYDSIPKEIPDPKDKKPESWDDDDDGVWKPRMIPNP EYKGRWKRKKIKNPNYKGKWKIPWIDNPEFEDDPDLYVLKPLQYVGIEVWQVKAGSVF DNILICDDPEYARSVVDEVRAANKEAEKEAFEEAEKRRKAREDEEARRAREEGEKRRR DRDRHRGRDRYRDRYRGHHRRYDYHDEL</aaseq>

Gene Sequence

<dnaseqindica>3..39#214..406#866..1124#1210..1266#1344..1391#1699..1785#1859..1916#2058..2125#2253..2348#2457..2513#2635..2724#3158..3184#3286..3297#atacagcagggagctattctggagatcctgacgatagaggtgagggcctgatttggtgctactttcattacaattagcatacttcatttatcaaattagcacttcaaaattcagtcctcatgtttcaactgtcaagccatacgattagagccttatttgtgctatgaattatgtcatgaatcatgttggtaatctgtgttgaaaccatgttaggtatacaaacaacctcggatgctaagcattttgctatatcggccaagttcccagaattcagtaacaagaaccggacattggtggttcagtattcgataaagattgagcaggatattgaatgtggtggtgcttatatcaagcttatgtctggctatgtgaatcagaagaaatttggcggtgacactccttataggtaaatttggctccctgtttttgatctgcaaaaagctaatgatgctatttctgaatttggtctacacattgactctaaaagttctaacaagggccatataaaagattttgtatgtgcaaaagataaaaagcttgaatgcaaatatgcaatttgttgaatagtgagtaaaccagaatgttaagccttaacagctaagctggtttggtttaccacaaaaacctaataacccatccttacagtaaaatgggttactatcttactagtattaagtacttgctagccaaatattggttggtggatatagaatgtaccaattactttccggtcctcatgttttttagataatgatccggttgtcattgtctcattgtgttcctcactgaactattattgtgttttcgttctgtctaatcctcttctgagttgcatctgctaacatcatgatgtttacttttgcagcttcatgtttgggcctgatatatgtggtgatcagacaaagaaactccatctgatactgtcttaccaagggcaaaactaccctataaagaaagatctgaaatgtgaaactgacaagttgacacatttttacacattcattcttaggccagatgcctcttatagtctacttgttgataaccgggagagagaatttggtagtatgtacactgactgggacatcctccctcctcgcaagatcaaagaatctaatgcgaagaaggtttgggatctgcagcatgattcagagagatgttattgtgaggaatttcaacaaaagcttctcttatatttgtcttctcttgcagccaaaagattgggatgacagggaatatattgaagatcctgatgaagttaaaccagaggtttgcaatttcatatttgttatacattgataatacaaataaagaacgttatgtaatcttttaccttaattttccagggctatgactctattcctaaagagattcctgatccaaaggacaaaaaggtttgcacttaagaattacgctgtaaatccagcttctaatattttcgcatttaattggcatatccgtttataatggacatagtgtcatatgttcttaatattatgagaagaacccgagtgcagacaaaggttccattttacctgttcaagcttgtttcattagaaacatcctatggcatgttagcattttctatctgctattagctatattgaacccagcatgacctcaatggctcttatggtgtgtttgctaagttaataaatataacacaggatgacatatgttttcctttctacactaaatcagcctgagtcatgggatgatgatgatgatggtgtatggaagcctagaatgataccgaatccagaatacaagggacgttggaaacgcaaggtttgttttattgactgattagctcctcattgccacattttgtagcatttttttaacatgcttctgtacgcagaaaattaagaaccctaactacaagggaaaatggaagatcccatggattgataatccaggtgagaaatgatgggctttttttttttaacagtactatgttagcgtttttcatttcttgctgcatatctgacttagagctggacctcacctccttccaaatttgaagtgaatattaagtgatgtatatgcatctttcacagaatttgaggacgacccagacctatatgtgctgaaacctttgcagtatgtgggaattgaggtttggcaggtattatatttcttggttaaatatgcttgttctgttggaatgctgcttctaggctgtgtcaaacgacacagtcctttacatgaatggcataaatgctatgtaagctaacattccaggtggtatgcaggtgaaagctggttcagtttttgacaacattttgatttgtgacgacccggagtatgcaagaagtgttgttgatgaagttagggctgcaaataaagaggtaggctcacctggaataacaacacagaacgcatatttgtaaatttatccatgccattagtttcatgtcatggaaacccccatttcaatatatttttctgtgttgtaggctgaaaaggaggccttcgaggaggctgaaaagcggaggaaggctagagaagacgaggtttgtgattgcttttagttcactggttactcttctgtttgttcattattatgaagagttgggtcttgtgactcagcaattccagttcatagggaagctaacagatgcttcttttccacaggaggctcggcgtgcacgagaggaaggagagaaacgaagaagagacagggatcggcaccgaggcagggaccgttacagggatagatatagagtacatttcttctccctgctatcatgtggaatactttcttccttctacaattcagctggtctttttactcctttcagagaggggttgcctctaatatatcaaacaccgaccataataatctatcaaaaattttagcttgtatctgcttgctttaggatataacaggaaaatctatagctgtattaaaatttacaaagatcaggtaaaagataggtagcaagaaaaaaaagtaatagacattctgtcagcaaaacatgtaagaattctagacatcatcactgtggagacatgtagaggtagtgtgcgtgctaaccactaactgccatatacatgtacaatttgctaatgctgatgcataggctagtatcagtaatatgacaccggttgatggccatcacaactgacatcttattttgtttctctacatttgcagggtcatcatcgtaggtatgactaccatgtaagttacaaaacttctccatttgcttgtatctctagaactgccaaaggtacaggagaaacagttcagtaacattttcaatctgttggtttcatattcaggacgagctatgaggtctccagattatcccattctttcaaggaacttcaggaagttagtgttgcccatcgactatttcatcacccaattgatgattgtaccaataaaatagaacatgttatttcgaggacagaacaaagctttatttcaggtgtggatagcacactacaacacgaactgatgctgttcacctgaaaccaagtaacaaactgaagatgtgaaagctagaacgtacatttttgggcagtaacaatatgctagcgaagaggacgatatgtttccatcttccagtaatatttctccttattagtgccttagaacatagaaaataaatcactctaggttgtgaaatataaactgtactttcattgtacttcagttatatatatctggcagtgtgtgtt</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0507300, RefSeq:Os05g0507300