Difference between revisions of "Os05g0511000"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os05g0511000| Description = Protein of unknown function DUF887, TLC-like family protein| Version = NM_001062548.1 GI:115464826 GeneID:4339284| L...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os05g0511000|
 
GeneName = Os05g0511000|

Revision as of 20:13, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os05g0511000

Description

Protein of unknown function DUF887, TLC-like family protein

Version

NM_001062548.1 GI:115464826 GeneID:4339284

Length

3540 bp

Definition

Oryza sativa Japonica Group Os05g0511000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:25374010..25377549

Sequence Coding Region

25374941..25375069,25375374..25375462,25375560..25375695,25375778..25375852,25376003..25376124
,25376227..25376302,25376789..25376848,25376930..25377058

Expression

GEO Profiles:Os05g0511000

Genome Context

<gbrowseImage1> name=NC_008398:25374010..25377549 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:25374010..25377549 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatctgccattgatggctgctaaagcctataagtacaaagcagaactacttgttaaggactacctgctagcagattcgtatgttccatacgcttctgtgcttggcggaattctgatgtgcaagttgtcatatgatttcacacgctttatcagttcattctacttcaaaggctatggttctctcacaaagatgcaaaaggttgaatggaataacaggggcatgtccaccgtccatgcaatattcattacacttatgtcagcatacttagtcttcttctcgggtttattctctgaccagcaggatggaccagtaacatttagaagttcgagcctctccaatttcacgctaggggtctcagttgggtatttcattgcggaccttgccatgatactatggttttacccttcactcggtggaatggagtatcttgtccaccatgtattgtcacttactgctgtaacgtatactatgctttctggggaaggacagttatacacatacatgagtctcatctcagagactactacacctggaatcaacctaagatggttccttgatgttgctggaatgaaaagatccaaaagatacgttgttaatggagttgcaatgtttcttacttggctggttgcaaggataattttgttcatgtacttgttttatcagatctttttacattatgatcagattaagcagatggagacctttggttatcttctggtttgtgttgtgcctgccatactgttcgtgatgaatatgatatggttttccaagatcttaaggggcctcaagaagacactggccaagaggcattga</cdnaseq>

Protein Sequence

<aaseq>MDLPLMAAKAYKYKAELLVKDYLLADSYVPYASVLGGILMCKLS YDFTRFISSFYFKGYGSLTKMQKVEWNNRGMSTVHAIFITLMSAYLVFFSGLFSDQQD GPVTFRSSSLSNFTLGVSVGYFIADLAMILWFYPSLGGMEYLVHHVLSLTAVTYTMLS GEGQLYTYMSLISETTTPGINLRWFLDVAGMKRSKRYVVNGVAMFLTWLVARIILFMY LFYQIFLHYDQIKQMETFGYLLVCVVPAILFVMNMIWFSKILRGLKKTLAKRH</aaseq>

Gene Sequence

<dnaseqindica>932..1060#1365..1453#1551..1686#1769..1843#1994..2115#2218..2293#2780..2839#2921..3049#agtttccacctttcccgcatcttccgccgtggggaagggagcaatcggcaagccaatccaatccggttgcttctcctccaatccaacctcgtcggcggcggcggcgacccgcgccgcgcaggtgaggcctcctcgcgctccccctcccgcttccgccgccgccgccgcttgggttgcccgtcgatcatgcgtcccgcggattgggggctcggtttttttgtatttgatctggtttgcgtggagattaggggcgatgtacggggtggatttttggttatgggttggattggatgggagagatcgtatttcgtatcgatgctccgtttggccttaggttttgtatttagtggatggctcgagtccaagcgtagaaaagagagaaagaagtgattcggaagttctatgttgttgtttcgatgtagatggaaaagtgtattgcgcatttattgttttgggattactagcaaaagtttcatgctcatttgtctcttgcttgtaaattttgatggaacaatagagagaagacacagggaccagctaagctgtgcatccttgttggtgatggttttttacaaatgatgaatagccgcctatcagcaaaattctttcattttacagttgctgcatttggaatttgattgaacaattatctccttttgttttggtcaagtcatggaactggtagtgccttgcattctgaaaaggggctctagattactgtacctcatttaagataatttggcagcagtacaatattatcctatatatattgtgatatgttcaattaatactgtaacacttatatgtacaatattatcctatatatattgtgactgttcatgcttgtacattgttcaattaatactgtcacacttatatgcatctctgtttgtgttcctcattaggctgttgagttatcacgtatttgattatggatctgccattgatggctgctaaagcctataagtacaaagcagaactacttgttaaggactacctgctagcagattcgtatgttccatacgcttctgtgcttggcggaattctgatgtgcaagttggtaatgtcacttctgactctcacttttctgttaattatcatcattctactgtgtacctgtgcaataacatgttcatagttgtgcgtatgtgtatactcaaagagaatgccaacatctatgccattgctcttttgcattggaatgtaagacctttttttttcattcactggttttatttgttccattaaaatcatggtcaatgatgatggcacataattaatatagcatattatttccaacatccatttcatagtccttgtaatggttttgttatcttgactattgtgttcttttgctagctcagtcatatgatttcacacgctttatcagttcattctacttcaaaggctatggttctctcacaaagatgcaaaaggttgaatggaataacaggtcagcagcattaaccaacttaattgccaagttcctacatcccactctattattataagcttctgatgatacatcttctgaccctttgttactataggggcatgtccaccgtccatgcaatattcattacacttatgtcagcatacttagtcttcttctcgggtttattctctgaccagcaggatggaccagtaacatttagaagttcgagcctctccaatttcacgctaggggtatacatatgcaattactttattgtcctgtgacttgtgatatttcattatacttagttacttgaatctcatgttttgctaggtctcagttgggtatttcattgcggaccttgccatgatactatggttttacccttcactcggtggaatggagtatgtaagtaaacatttttcatcttatttttaccctctcttcagtttccctcctaactgactaacctaggtccgttgccctccatttgactcctgcaaactgcattatttgtcattagccattaccaacttactcttggctgtcttttgtcagcttgtccaccatgtattgtcacttactgctgtaacgtatactatgctttctggggaaggacagttatacacatacatgagtctcatctcagagactactacacctggaatcaacctaagatggtaactgagtatacaaatatgttgcatagaattttgttttggtatcatcttcaatccatcagtccatctaaactgctattctctcccctttgtgttatcaaggttccttgatgttgctggaatgaaaagatccaaaagatacgttgttaatggagttgcaatgtttcttacttggctggtaagaataaagttctaaactagttgtgttgtggcagaatgtattgttctgcactgactataattaaatgggaattatgtgatctatgcatacattttcgtgaaagcattagtctttaattacatctgaacttttcaactgtaatattgttttatttaaatttttgtgatttcgaatttctgctagccttggaagcagttgtcttgctagttcggatttgtacatatgttcaaacaaatgcttgttttccagtgaggataatattggcacataggtttattggctaccaagtgagatatattgaattattctaagggaaaatgatccttcctaactatgggagttttaagactaaactaccaaagttgtatttgaacactcaggtttacttaaatctgtcgctaaatcgataatatggttttttactatattttggagcttcaagtaccttggtctgctaacaatgaaagaaactcctttgtgcaggttgcaaggataattttgttcatgtacttgttttatcagatctttttacattatgatcaggtacatggtaattcttctggattcaatgtacatgatggctatcaaacacatatttctgacttgatacttgttcgcatacagattaagcagatggagacctttggttatcttctggtttgtgttgtgcctgccatactgttcgtgatgaatatgatatggttttccaagatcttaaggggcctcaagaagacactggccaagaggcattgagtggggcaaggggtatgcatgtacagccacgacaaaccacctatctgtaaattcactcagcaggccagcagcctatagcttctcattagtcacgatggctaatcctggtaatatcagcttggccattaagatccagatttatgattgaatgcccagctttttatgcatggatgatatattaatttgtatatatgttccgctatggctgtatgttcttaatacccatcttctttttctcggtataaatgattatatcttagttttaacttaaacaactatttgccccaatttcagtcacattgtcaacacattgctgtaatttgccatcagctttggccatcattcccaagaatagtttgatcatcaacttttagtctccctggactaaactgcctttctttagatctggcttcacaatgatgcccgagtttttaaaacatgtataggctgaagaattttggaatttggaatttggaatcaagaaagttttc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0511000, RefSeq:Os05g0511000