Difference between revisions of "Os05g0523100"
(Created page with "{{JaponicaGene|
GeneName = Os05g0523100|
Description = Nucleic acid-binding, OB-fold domain containing protein|
Version = NM_001187565.1 GI:297724260 GeneID:9268714|
Lengt...") |
|||
| Line 1: | Line 1: | ||
| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os05g0523100| | GeneName = Os05g0523100| | ||
Revision as of 20:13, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os05g0523100 |
|---|---|
| Description |
Nucleic acid-binding, OB-fold domain containing protein |
| Version |
NM_001187565.1 GI:297724260 GeneID:9268714 |
| Length |
6005 bp |
| Definition |
Oryza sativa Japonica Group Os05g0523100, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 5:26104198..26110202 |
| Sequence Coding Region |
26104198..26104380,26104454..26104525,26104608..26104694,26104835..26104924,26105010..26105054 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008398:26104198..26110202 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008398:26104198..26110202 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggtcggcggcggggtacgtgacggcgacgaggaggcggcgctatggccgcggccgatcatgctggaggaggactactactccagacggcgccgcgcccgcgagcacgaccggcgccgcgccgccgccctcagggaggaggagtccaacgagcggctcgcgcgggagtgcctggatcactacaacgccctgcacccgggcgacgagcacgacctcgcgccgggcgacgtgacgctgtgcagcgcgccatgcaactccaccacctggacgcacggcaacttcgtggctcgccgccgctccggctgcctcgcgtcgttgttcctgccctcccggccgcggacgctcttcttcttcgagcacatgtccagcaaggacttcctcggcgtcgtcacgtgcgtcccgatggctgacgagccggacggcggcggcctcctggcgagagtcccgctctgccgccggtgggcgacccggcgccgccggagcggcaggtgggactgcgtctgcaggacctgcaaccgcggcctccacgtgaagcatccatggctgaagaagaaggtggtcggggagttcccgtgcgggcatctggaggcggcgagcgtctgcaagatgtgcttctcctactccgacgtcgtccatccaagcccggggaagtttgcgcgcgggtaccgggagcacgaggacgatttctggcgtccctgcaacggttcacaacaattacgatatcctgtattagttagagataacatggcacctagcaatttgattactgaattaacaccaaagaacgataggtggagaatcaaagtaaaagttattaggctatgggatgcggttaatcctacaatggttgatgagttctatggtatacagatgattgtactagatgcagagggcaactcaatacatgtctctatctcaaagcaattggcgaaccacttcaggccaaaaattaagattaactcaatatatacttttaaaaatttcaaagttatggaacatgataaataccgtgtcctaaaaaacaatctgaaaatccttttttatcatgataccatagtaaaagagacctgtttgtatttagatgtgattggcttacttagcgggatgaagccgatcgagcaaagaatgctaggaaaaaacacaagcagggagagggtttgcaacatgcgtgaaattgaactccttttattagagggagaaaaagttaaaattactctatggggagatattttagcaaatatggttgacgacgatttgcttgggaagcaaactgtgttcatcgccactggacttctggttaaagaatatgaaaaattattatcatttggagtaacaagttcgacagaagtttttttggatatggaaattcctgcaagcatggaaatattgagcaggcataatgctgaaaaggttttgcccacaatgattgaagtggacgcaagcactcaaggaaccattgaagagcaaatgttctacaatagaaagacattgaaagaaataacagaattgcgatatagtaatatacaacagaaggaatttatatgcacagtcaaagctaaaattgaggagattaaatcaagaaattggtggtatatgtcttgcgataagtgcttttgtggaacaagaaaggaatcaaatgtatacatttgcaattcatgcggaaaggaagcagtgaacccaaaaccacggtatgtaataaaccttgagataagtgaccacactactaggacgacatgtacaatatttaatgaggaagcagaaagaatatttggtcataagtctgtgtccaccatgctggaggaacagaatggacaaattgatatgattcctgatacaatacgtcaaatatgtggaagaatattgatattcagattgaagttgactaaaaggaatttagaagagtgtaaggaagactacaaagtgaactacacttttacacctaatgaaaagcttgagatgaattatgtaaatgacaaggcagaagagtcaatgttgaagtacaacgatgattatggcttcactgatttgcaaaaatcagaaaatgagtttgggcagcacaattttcaggtaaaagaagagccaaaaaatgaaagtagtgatgattatgaaaagaacaatcatcgcaaaacaaagaaagagagatcaaacatgagatctacaaaaagatcaaagaaggaaccatacattaccgattctgatgggaaaacaaatgaaaaggcaatcacaatcgatgatgattccgaagaatcacttgatgattattttgatgaagaatacaataaaaaggttacccaggagagtacaaagacaaatccttctaaaagaagagttacaagacgctttaaaatagctaacaagtcaatgttgaagtgcaatgatgattatggcttcactgatttgcaaaaatcagaagatgagtttgggcagcacaattttcaggtaaaagaagagccaaaaaatgaaagtagtgatgattatgaaatgaacaatcatcgcaaaacaaagaaagagagatcagacatgagatctacaaaaagatcaaacaaggaaccatacattactgattttgatgggaaaacaaatgaaaaggcaattacaatcgatgatgattgtgaagaatcacttgatgattattttcatgaagaatacaatgaaaaggttacacaggagagtacaaagacgaatccttctaaaagaagagttacaagacgttttaaaacatctaacaaggctaagaaaggaaaatgttctgaaatgaaaactcagagaaataaggaaccatatactactgattgtgagaagatagcaaatgacaaaccaatttcgcttgatgatgattttgatgaagaatataataaaaatatggtaaggggaaaaggttgtggaaagaagagtacaaatatgggaacttgcacaaaaagtgcaattgaaaatacaattcaagatgatgaagtgcatgacggaaaaattgcttcaggaactgctaaaagaccatcaaggaaatttataatttcagatagtgaggatgagcacagcagtaatacaaaggtgactggggacagcaccagctgtaatagtagtaaggaagatataaacaaaggtcgatgcaattataatattgagaacattaaagttgacatgaatgagcagtccagtcgatgcagatcaacaaggattagaagaccacccacccgatactcatattag</cdnaseq> |
| Protein Sequence |
<aaseq>MVGGGVRDGDEEAALWPRPIMLEEDYYSRRRRAREHDRRRAAAL REEESNERLARECLDHYNALHPGDEHDLAPGDVTLCSAPCNSTTWTHGNFVARRRSGC LASLFLPSRPRTLFFFEHMSSKDFLGVVTCVPMADEPDGGGLLARVPLCRRWATRRRR SGRWDCVCRTCNRGLHVKHPWLKKKVVGEFPCGHLEAASVCKMCFSYSDVVHPSPGKF ARGYREHEDDFWRPCNGSQQLRYPVLVRDNMAPSNLITELTPKNDRWRIKVKVIRLWD AVNPTMVDEFYGIQMIVLDAEGNSIHVSISKQLANHFRPKIKINSIYTFKNFKVMEHD KYRVLKNNLKILFYHDTIVKETCLYLDVIGLLSGMKPIEQRMLGKNTSRERVCNMREI ELLLLEGEKVKITLWGDILANMVDDDLLGKQTVFIATGLLVKEYEKLLSFGVTSSTEV FLDMEIPASMEILSRHNAEKVLPTMIEVDASTQGTIEEQMFYNRKTLKEITELRYSNI QQKEFICTVKAKIEEIKSRNWWYMSCDKCFCGTRKESNVYICNSCGKEAVNPKPRYVI NLEISDHTTRTTCTIFNEEAERIFGHKSVSTMLEEQNGQIDMIPDTIRQICGRILIFR LKLTKRNLEECKEDYKVNYTFTPNEKLEMNYVNDKAEESMLKYNDDYGFTDLQKSENE FGQHNFQVKEEPKNESSDDYEKNNHRKTKKERSNMRSTKRSKKEPYITDSDGKTNEKA ITIDDDSEESLDDYFDEEYNKKVTQESTKTNPSKRRVTRRFKIANKSMLKCNDDYGFT DLQKSEDEFGQHNFQVKEEPKNESSDDYEMNNHRKTKKERSDMRSTKRSNKEPYITDF DGKTNEKAITIDDDCEESLDDYFHEEYNEKVTQESTKTNPSKRRVTRRFKTSNKAKKG KCSEMKTQRNKEPYTTDCEKIANDKPISLDDDFDEEYNKNMVRGKGCGKKSTNMGTCT KSAIENTIQDDEVHDGKIASGTAKRPSRKFIISDSEDEHSSNTKVTGDSTSCNSSKED INKGRCNYNIENIKVDMNEQSSRCRSTRIRRPPTRYSY</aaseq> |
| Gene Sequence |
<dnaseqindica>5823..6005#5678..5749#5509..5595#5279..5368#5149..5193#4880..5062#4676..4804#4543..4602#4232..4414#4028..4156#3891..3950#3520..3817#3292..3446#2971..3109#2802..2883#2613..2731#2404..2531#2085..2258#1865..2016#1643..1675#1..706#atggtcggcggcggggtacgtgacggcgacgaggaggcggcgctatggccgcggccgatcatgctggaggaggactactactccagacggcgccgcgcccgcgagcacgaccggcgccgcgccgccgccctcagggaggaggagtccaacgagcggctcgcgcgggagtgcctggatcactacaacgccctgcacccgggcgacgagcacgacctcgcgccgggcgacgtgacgctgtgcagcgcgccatgcaactccaccacctggacgcacggcaacttcgtggctcgccgccgctccggctgcctcgcgtcgttgttcctgccctcccggccgcggacgctcttcttcttcgagcacatgtccagcaaggacttcctcggcgtcgtcacgtgcgtcccgatggctgacgagccggacggcggcggcctcctggcgagagtcccgctctgccgccggtgggcgacccggcgccgccggagcggcaggtgggactgcgtctgcaggacctgcaaccgcggcctccacgtgaagcatccatggctgaagaagaaggtggtcggggagttcccgtgcgggcatctggaggcggcgagcgtctgcaagatgtgcttctcctactccgacgtcgtccatccaagcccggggaagtttgcgcgcgggtaccgggagcacgaggacgatttctggcgtccctgcaacggttgtaaaatgtaaacgcttgtccatgaactaaccctaccaatgtttgaaaaacacgaatattagaaaagaacataatacaaaataaatagaaggggtgaaactttaaatccagaccggttaacccaccagatgctaaccggaaaacccctagccatttctccctaccaatgtttcatgtcgcttactcaaatctatctatctatctatctatctattatctatctatctatctatctatctatctatctatctatctatctatctattatctatctatcttctatctattatctatctatctatctatctattatatactaaaagtccattaaactccctacaaacgctctcaagctgccacgtgtctccctcaaaacactctcaagttgccacgtggcgtaacgagaggaattcagcacctcgtagggcccgcacattatttccataaatatatgtacgtgtacacagggcaagattccaaatctcaaaaagcaaaatttagatcactaggaaagattattaattgcaagaaggattagttccatatacatgagacaatattcgtaaggcttgcatacatatatatacaccccgccagcatgcgacattagtcgattccggaagaagtcgattccgacgacggagcagaagaagtcgattccggcggacggagcagaagaagtctgcggcaccttgcgaatcatctatggcataagaaggtatatcacgcacccacaaaagaacacaatcatgacatcatctaatcatgatcttgcagctaggaaataacatatgcatctatacagttttgtcatcatattttcagcagaagaaactaacattgcacctacaaaagaacacaattacgatatcctgtattagttagaggtacattatgttgcatctatgtatacaattttgtcatttttttttccagcacaacaattacgatatcctgtattagttagaggtacattatgttgcatctatgtatacaattttgtcatttttttttccagcacaaaaaagtaaccttgcacctatcaaagaacacaattatgagagtttgtattaattagttctataaaataacataaacatgtatacgactctctgtcaaatttgtttagtaactatatgcagtactactcatttgcagataacatggcacctagcaatttgattactgaattaacaccaaagaacgataggtggagaatcaaagtaaaagttattaggctatgggatgcggttaatcctacaatggttgatgagttctatggtatacagatgattgtactagatgcagaggtatgattgttgtaaacatgtgatttaatatattgttctattatgtaaatactatttttttggtgcagggcaactcaatacatgtctctatctcaaagcaattggcgaaccacttcaggccaaaaattaagattaactcaatatatacttttaaaaatttcaaagttatggaacatgataaataccgtgtcctaaaaaacaatctgaaaatccttttttatcatgataccatagtaaaagaggtaaaatcaaaaagacaatgtttcttggactattacttcgagtttacagacaggaaaacattaaggagtaggttgaataaagatcaacagttatcaggtatgtgcataatcttacttcttttaaacattgttatttgtactaaagacctgtttgtatttagatgtgattggcttacttagcgggatgaagccgatcgagcaaagaatgctaggaaaaaacacaagcagggagagggtttgcaacatgcgtgaaattgaactccttttattagagtaagattgttgtctgcaaatttaaaccagcactaatactttctatgtggtatattttacatgactttattgcatttgtaggggagaaaaagttaaaattactctatggggagatattttagcaaatatggttgacgacgatttgcttgggaagcaaactgtgttcatcgccactggacttctggttaaagaatatgaaagtgaggatgttatttttttctaatttaacgtacttatagttttagtaaactaacgacattgatcatttagaattattatcatttggagtaacaagttcgacagaagtttttttggatatggaaattcctgcaagcatggaaatattgagcaggtgtgcagtagtagcatttaaattcatatatatatttgttgatttgtctaaaattatctgatggattatattgcattttatttataggcataatgctgaaaaggttttgcccacaatgattgaagtggacgcaagcactcaaggaaccattgaagagcaaatgttctacaatagaaagacattgaaagaaataacagaattgcgatatagtaatatacaacagaaggtacatatccattcctatgttacgtttatttttcatttgtgtatttaatgttgggaaaaatctacttgatggctgatgtaatgagcattacctaaattaagtggtacgtttaatcgtgaagtcatctttagtcactctttcaagctgattagttaaccaacattaatttgttttttatttaggaatttatatgcacagtcaaagctaaaattgaggagattaaatcaagaaattggtggtatatgtcttgcgataagtgcttttgtggaacaagaaaggaatcaaatgtatacatttgcaattcatgcggaaaggaagcagtgaacccaaaaccacggtaagcatgctcttcaaattttatttgacatattgtagcaggtatatttaccattaacggcacattgtaccaggtatgtaataaaccttgagataagtgaccacactactaggacgacatgtacaatatttaatgaggaagcagaaagaatatttggtcataagtctgtgtccaccatgctggaggaacagaatggacaaattgatatgattcctgatacaatacgtcaaatatgtggaagaatattgatattcagattgaagttgactaaaaggaatttagaagagtgtaaggaagactacaaagtgaactacacttttacacctaatgaaaagcttgagatgaattatgtaaatgacaaggcagaagaggtatgactatttgcattattcttttttatacatgttatagatcttatattacaatataaatattaatttgcagtcaatgttgaagtacaacgatgattatggcttcactgatttgcaaaaatcagaaaatgaggtaatatataacaaataaaaaaaatatttttgtaatgcatatgatatatatataataatttattggatgttctgtagtttgggcagcacaattttcaggtaaaagaagagccaaaaaatgaaagtagtgatgattatgaaaagaacaatcatcgcaaaacaaagaaagagagatcaaacatgagatctacaaaaagatcaaagaaggtatgtttaattgctttcttacataacaattcgtaaagttgtttatagtagtacactaataatgatgttttataggaaccatacattaccgattctgatgggaaaacaaatgaaaaggcaatcacaatcgatgatgattccgaagaatcacttgatgattattttgatgaagaatacaataaaaaggttacccaggagagtacaaagacaaatccttctaaaagaagagttacaagacgctttaaaatagctaacaaggtacttcatttatttactttccaaattcactcaatttagttttcacataaattatttaccatttcaatatggcactatgatataggctaagaaagatcttatattacaatataaatattaatttgcagtcaatgttgaagtgcaatgatgattatggcttcactgatttgcaaaaatcagaagatgaggtaatatataacaaataaaaaatatttttacaatatatattatatatataattatttattggatgttctgtagtttgggcagcacaattttcaggtaaaagaagagccaaaaaatgaaagtagtgatgattatgaaatgaacaatcatcgcaaaacaaagaaagagagatcagacatgagatctacaaaaagatcaaacaaggtatgtataattgctttcttatataacaattcgtaaagttatttatagtactacactaataatgatgttttataggaaccatacattactgattttgatgggaaaacaaatgaaaaggcaattacaatcgatgatgattgtgaagaatcacttgatgattattttcatgaagaatacaatgaaaaggttacacaggagagtacaaagacgaatccttctaaaagaagagttacaagacgttttaaaacatctaacaaggtacttcatttattttactttccaaattcactcaatttagttttcacataaattatttaccatttcaatatggcactatgatataggctaagaaaggaaaatgttctgaaatgaaaactcagagaaataaggtacaattcttacttttctttcatatacaaaacgatttgtcaaactattactgacatgttatatacaattgatgggtattaataggaaccatatactactgattgtgagaagatagcaaatgacaaaccaatttcgcttgatgatgattttgatgaagaatataataaaaatatggtcatggcggacaccagtacttctaaaagaaaagtcagacactacataggacaaactaacattgtacttcattgagttttactttctatttaatgttacctttcatgtttgtccattaatgtcaatatgctattgtgcaggtaaggggaaaaggttgtggaaagaagagtacaaatatgggaacttgcacaaaaagtgcaattgaaaatacaattcaagatgatgaagtatttgatatatttgttaaataaatcatgtattttaacataaaaacttttttaattaactaactaagaacacaaaatttaggtgcatgacggaaaaattgcttcaggaactgctaaaagaccatcaaggaaatttataatttcagatagtgaggtactgcatgagacaatttatcaagttattaattaatatattttttttgtaacaactaattttttttccataggatgagcacagcagtaatacaaaggtgactggggacagcaccagctgtaatagtagtaaggaagatataaacaaaggtcgatgcaattataatattgagaacattaaagttgacatgaatgagcagtccagtcgatgcagatcaacaaggattagaagaccacccacccgatactcatattag</dnaseqindica> |
| External Link(s) |
