Difference between revisions of "Os05g0524500"

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(Created page with "{{JaponicaGene| GeneName = Os05g0524500| Description = Protein kinase-like domain containing protein| Version = NM_001062626.1 GI:115464982 GeneID:4339370| Length = 4571 b...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os05g0524500|
 
GeneName = Os05g0524500|

Revision as of 20:13, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os05g0524500

Description

Protein kinase-like domain containing protein

Version

NM_001062626.1 GI:115464982 GeneID:4339370

Length

4571 bp

Definition

Oryza sativa Japonica Group Os05g0524500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:26174523..26179093

Sequence Coding Region

26174566..26174680,26174785..26175337,26175445..26175941,26176040..26176178,26176317..26176388
,26176479..26176550,26176638..26176718,26177034..26177200,26177286..26177551
,26177647..26177773,26177887..26177955,26178063..26178255,26178350..26178842

Expression

GEO Profiles:Os05g0524500

Genome Context

<gbrowseImage1> name=NC_008398:26174523..26179093 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:26174523..26179093 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagcgttcaacgccgggaacaatggcggcacggtcgtggttgcttctcctctgcttcgtcgccgtcgccaccgccggagtgctccaagctcgtgcccaacctgacagcaacggtttcatcagcgtagactgtggcctcccggggaagacgggcttcgtggacgacaagaccaagatatcctacgcggcggacgacggcttcaccgacggcggcgcgtgccacaacatctcggcggagtacatcacgccggggctcgccaagcgctaccacaccctgcgcagcttcccggacggcaagcgcaactgctacacgctccggtcactcgtcgccgggctcaagtaccttttccgcaccaccttcttttacggcaactacgacggcctcaacaagctacccgtgtttgatctctacgtcggcgtcaactactggacgatggtgaacatcacgggccccggcgacgcggtgatcgtggaggccatcgtcgtcgtgccggatgacttcgtgcaggtctgcctggtgaacaccggcgccgggacgccgttcatctccgggttggacctgaggcctctcaagaacacgctctacccgcagtcgaacgccacgcagggccttgtcctcctcggccggctcaacttcggcccgaccgattacaccgacgtcataaggtacccggatgatccgcacgacaggatatggttcccgtgggtggactcgaccaaatggagccagatatcatcgacgaagaaagtgcaggatctagacaacgacatgtacgagacgccgacggcggtgatgcagacggcgatcacgccgcggaacgcctccaggaacatcgagttctcctgggaccccgtgccgctgcccaacgacccgacgcccgggtacatcgccatcttccacttctccgagctgcagctcctccccggcaacgccgtgcgcgagttctacatcaacctcaacggcaagccgtggtccctgaccgccttcaagccggagtacctctacaacgacgccaccttcaaccggaacccattcctacggtacccgcagtacaacatctccatcaacgccaccgccaactcgacgctgccgccgctcatcaacgccgtcgaggtgttctccgtcatccccactgccaccattggcactgacccagaggacgtggctgcaatcacggcgatcaaggagaagtatcaggtggtgaagaactggatgggtgacccatgtgttccgaagatgcttgcgtgggacaagttgacctgcagctatgccatttctaaccctgcaagaatcattggcctaaacctgtcctccagtggtttgagcggtgaggtatcgtcctatttcgggaatcttaaggctattcaaaacttggatttgtcaaataataaattgacaggtccaattccagacgccctttcacagttaccttcattgacatttctagatttgacaggaaatcaactcagtggatcgatcccgtctggtcttctcaagagaattcaagatggctctctaaatctaagatatggaaataatccaaacctctgcactaatggcgattcatgccagccagcaaaaaagaagagcaagctagctatctacatagttattccaatagttatagttctggttgtggtgataatatcagtggcagtactactttgttgcctgttgagacggaaaaagcaagcaatgagcaattctgtgaagccacaaaatgagacagtgagcaatgtgtcgtcaaatggcggatacgggcatagttcatcactacaacttaagaatcgtcgatttacgtacaatgaacttgagaagataacgaacaacttccagcgggtgcttggccgtggagggtttgggtacgtttacgacggcttcttggaggatggcactcaagtggcagtgaaattgcggtctgaatcttccaatcaaggtgctaaggagttcctcgcggaggctcaaattttaacccggattcatcacaagaatcttgtctctatgattggttactgtaaggatggggaatacatggcacttgtatatgagtacatgtcagaaggaacactacaagaacacattgcaggtaaaaacaacaacaggatatatttaacctggagagagaggcttcgaatagcactagaatctgcacaagggctagaatacctacacaaggcgtgcaacccaccacttattcatagggatgtgaaggcgaccaacatcctattgaacacaaggcttgaggcgaagattgctgactttggcctatccaagacattcaatcacgttaatgacacccatgtatctacgaacacgcttgttggcacacctggatatgtggatccagagtaccaagcaacaatgcaaccaaccaccaagagcgacgtctatagctttggtgttgtcttattggagttgatcacagggaagccgtctattctacgtgaaccagggcccattagcatcatccagtgggcacggcaacgtttggcacgaggtaacatcgaaggtgtggtggatgcacacatgcatggtgaccatgatgtgaatggtgtgtggaaggccgcagacattgcccttaaatgcaccgcacagacatcgacacaacgacccactatgaccgatgtggtagctcagctgcaggagtgcctagagctcgaggataggcgatgtggcatggaagatacatataacaacttctatgccggcaacaacaatgatcccaactcaagttataacatgtacaacacggaccagtccactgatgtgagtcaaaacaacacgatggagcataattttgaaagagtgccaaccatggctacagggccagttgcacgataa</cdnaseq>

Protein Sequence

<aaseq>MERSTPGTMAARSWLLLLCFVAVATAGVLQARAQPDSNGFISVD CGLPGKTGFVDDKTKISYAADDGFTDGGACHNISAEYITPGLAKRYHTLRSFPDGKRN CYTLRSLVAGLKYLFRTTFFYGNYDGLNKLPVFDLYVGVNYWTMVNITGPGDAVIVEA IVVVPDDFVQVCLVNTGAGTPFISGLDLRPLKNTLYPQSNATQGLVLLGRLNFGPTDY TDVIRYPDDPHDRIWFPWVDSTKWSQISSTKKVQDLDNDMYETPTAVMQTAITPRNAS RNIEFSWDPVPLPNDPTPGYIAIFHFSELQLLPGNAVREFYINLNGKPWSLTAFKPEY LYNDATFNRNPFLRYPQYNISINATANSTLPPLINAVEVFSVIPTATIGTDPEDVAAI TAIKEKYQVVKNWMGDPCVPKMLAWDKLTCSYAISNPARIIGLNLSSSGLSGEVSSYF GNLKAIQNLDLSNNKLTGPIPDALSQLPSLTFLDLTGNQLSGSIPSGLLKRIQDGSLN LRYGNNPNLCTNGDSCQPAKKKSKLAIYIVIPIVIVLVVVIISVAVLLCCLLRRKKQA MSNSVKPQNETVSNVSSNGGYGHSSSLQLKNRRFTYNELEKITNNFQRVLGRGGFGYV YDGFLEDGTQVAVKLRSESSNQGAKEFLAEAQILTRIHHKNLVSMIGYCKDGEYMALV YEYMSEGTLQEHIAGKNNNRIYLTWRERLRIALESAQGLEYLHKACNPPLIHRDVKAT NILLNTRLEAKIADFGLSKTFNHVNDTHVSTNTLVGTPGYVDPEYQATMQPTTKSDVY SFGVVLLELITGKPSILREPGPISIIQWARQRLARGNIEGVVDAHMHGDHDVNGVWKA ADIALKCTAQTSTQRPTMTDVVAQLQECLELEDRRCGMEDTYNNFYAGNNNDPNSSYN MYNTDQSTDVSQNNTMEHNFERVPTMATGPVAR</aaseq>

Gene Sequence

<dnaseqindica>44..158#263..815#923..1419#1518..1656#1795..1866#1957..2028#2116..2196#2512..2678#2764..3029#3125..3251#3365..3433#3541..3733#3828..4320#atgcttcagtagttcagttagctcgctgctgcctgcatgtgcaatggagcgttcaacgccgggaacaatggcggcacggtcgtggttgcttctcctctgcttcgtcgccgtcgccaccgccggagtgctccaagctcgtgcccaacctgacagcaacggtacattccaccatgtcctgtctttcaagttttgatccgcaactaggtagtgctgcttcacaatgaaatcaatgtgctagcgtgtgtaatatgcttggctgcaggtttcatcagcgtagactgtggcctcccggggaagacgggcttcgtggacgacaagaccaagatatcctacgcggcggacgacggcttcaccgacggcggcgcgtgccacaacatctcggcggagtacatcacgccggggctcgccaagcgctaccacaccctgcgcagcttcccggacggcaagcgcaactgctacacgctccggtcactcgtcgccgggctcaagtaccttttccgcaccaccttcttttacggcaactacgacggcctcaacaagctacccgtgtttgatctctacgtcggcgtcaactactggacgatggtgaacatcacgggccccggcgacgcggtgatcgtggaggccatcgtcgtcgtgccggatgacttcgtgcaggtctgcctggtgaacaccggcgccgggacgccgttcatctccgggttggacctgaggcctctcaagaacacgctctacccgcagtcgaacgccacgcagggccttgtcctcctcggccggctcaacttcggcccgaccgattacaccgacgtcataaggtaaatccaagcctcaatttaaattcatatcttacgttaaccatttccattatctaaaaaaaaattaagatcttagctgatcgattgatcgagctgcattgctgcaggtacccggatgatccgcacgacaggatatggttcccgtgggtggactcgaccaaatggagccagatatcatcgacgaagaaagtgcaggatctagacaacgacatgtacgagacgccgacggcggtgatgcagacggcgatcacgccgcggaacgcctccaggaacatcgagttctcctgggaccccgtgccgctgcccaacgacccgacgcccgggtacatcgccatcttccacttctccgagctgcagctcctccccggcaacgccgtgcgcgagttctacatcaacctcaacggcaagccgtggtccctgaccgccttcaagccggagtacctctacaacgacgccaccttcaaccggaacccattcctacggtacccgcagtacaacatctccatcaacgccaccgccaactcgacgctgccgccgctcatcaacgccgtcgaggtgttctccgtcatccccactgccaccattggcactgacccagaggacggtacgtgcgtgcgtgcacattggttgcagacacatgtaagattaattatcaagcatgtcatgcgtgtttgtgaaaattaatatgtgtgcacttggcagtggctgcaatcacggcgatcaaggagaagtatcaggtggtgaagaactggatgggtgacccatgtgttccgaagatgcttgcgtgggacaagttgacctgcagctatgccatttctaaccctgcaagaatcattggcctgtaagtaattcagtccatgtgtatcgagctagtaaggatttgtggtcatgaaaaaaaataaaagggggaaaaaatttaagttggagattattaattgcaaattgcaactgggtcatctgatcatactgtcttttgcagaaacctgtcctccagtggtttgagcggtgaggtatcgtcctatttcgggaatcttaaggctattcaaaacttgtaagttccgagttcacgatgttcacttgttaaaattatttgtggaatttcgtgttaaatttgaaaaatctcttgtccaatatcttgtagggatttgtcaaataataaattgacaggtccaattccagacgccctttcacagttaccttcattgacatttctgtaagtttgtagtaacttgacaagtttaccaaattctgcatgtattgtttacttagcatcatttctaaccgatatggcatcctttagagatttgacaggaaatcaactcagtggatcgatcccgtctggtcttctcaagagaattcaagatggctctctaaatctaaggtaagtatacacatcaatatcttctaattaaagagaacttttacaacacttgagaaggtaccaagttgataacaaaatttggtactgcccctgtctcataaaagacaaacttagtacgaaatatgacgcatcatagcacaacgaatctggagttctagacagagatgtgccacatcatatactaggtttattttgtatgggacggagggagtacctcttaaggaccataacacctctattttcaagttgccaaaaccccaggtcaattttagaaaataaattatatttgactcagcatatttatttcattgatagatatggaaataatccaaacctctgcactaatggcgattcatgccagccagcaaaaaagaagagcaagctagctatctacatagttattccaatagttatagttctggttgtggtgataatatcagtggcagtactactttgttgcctgttgagacggaaaaagcaaggtgaggtttgttataaacacagtaattgtccatctacttgttcatccttttaacactagtgatgcttattcacatattttagcagcaatgagcaattctgtgaagccacaaaatgagacagtgagcaatgtgtcgtcaaatggcggatacgggcatagttcatcactacaacttaagaatcgtcgatttacgtacaatgaacttgagaagataacgaacaacttccagcgggtgcttggccgtggagggtttgggtacgtttacgacggcttcttggaggatggcactcaagtggcagtgaaattgcggtctgaatcttccaatcaaggtgctaaggagttcctcgcggaggtaaaatttcttcagctgcagttgatattttgctttgcctatacttacaccaagttgttgctagtgggatataattggttaatttcacttgttaggctcaaattttaacccggattcatcacaagaatcttgtctctatgattggttactgtaaggatggggaatacatggcacttgtatatgagtacatgtcagaaggaacactacaagaacacattgcaggtatgcataggatgtttatgatcaacttgtaggatacattgtaatacttcatctaacgtatcatttcacatgactctcatgatcttcaattctcattctatacctatttataggtaaaaacaacaacaggatatatttaacctggagagagaggcttcgaatagcactagaatctgcacaaggtaactacttgaattctagtaaagtgtttggaggtatgcttttttacacttttccctagaagttgatcatcactagtttaattatttggataactgataatggttagggctagaatacctacacaaggcgtgcaacccaccacttattcatagggatgtgaaggcgaccaacatcctattgaacacaaggcttgaggcgaagattgctgactttggcctatccaagacattcaatcacgttaatgacacccatgtatctacgaacacgcttgttggcacacctggatatgtggatccagagtatgtaaatctcatctatatttctcgaaaccgttgttcagtgttttctattacaaatgttaagtgaagcttgtggaactggatgaacatgtaggtaccaagcaacaatgcaaccaaccaccaagagcgacgtctatagctttggtgttgtcttattggagttgatcacagggaagccgtctattctacgtgaaccagggcccattagcatcatccagtgggcacggcaacgtttggcacgaggtaacatcgaaggtgtggtggatgcacacatgcatggtgaccatgatgtgaatggtgtgtggaaggccgcagacattgcccttaaatgcaccgcacagacatcgacacaacgacccactatgaccgatgtggtagctcagctgcaggagtgcctagagctcgaggataggcgatgtggcatggaagatacatataacaacttctatgccggcaacaacaatgatcccaactcaagttataacatgtacaacacggaccagtccactgatgtgagtcaaaacaacacgatggagcataattttgaaagagtgccaaccatggctacagggccagttgcacgataaaggcctttgccaatctgatccgagactgctagtcctaaaatagatacatgcagaactgaaacaatattgttgctttaatttaccaaagtaaatgcaagcgcataaagtttcaaacaatcaagatctagagcttttaccgtgtggaatttgtaatcaatacacttatctattctttgatatttataactcttccatactattcttcaagaagagaaaagtcaatatacacctaataattttttttatcttgg</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0524500, RefSeq:Os05g0524500