Difference between revisions of "Os05g0529600"

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(Created page with "{{JaponicaGene| GeneName = Os05g0529600| Description = DNA polymerase III, delta family protein| Version = NM_001062658.1 GI:115465046 GeneID:4339405| Length = 6682 bp| D...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os05g0529600|
 
GeneName = Os05g0529600|

Revision as of 20:13, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os05g0529600

Description

DNA polymerase III, delta family protein

Version

NM_001062658.1 GI:115465046 GeneID:4339405

Length

6682 bp

Definition

Oryza sativa Japonica Group Os05g0529600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:26361652..26368333

Sequence Coding Region

26361652..26363415,26363854..26364073,26364379..26364708,26365515..26366063,26366400..26366460
,26367771..26367858,26368274..26368333

Expression

GEO Profiles:Os05g0529600

Genome Context

<gbrowseImage1> name=NC_008398:26361652..26368333 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:26361652..26368333 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccggcgccggcggcgacagcggccgcggggatggggagtggcggcggcggcggcggcagcggcgagcaccacatgcggggacacgcgcacctgaccaactgcatccacctgcggcaccaccacgcgcacgggctcggcgccgggagcgcgtcgtcggggcggaggcggagcccgacggggtcgtccgcgtcggcgtcggccgcgctgatgcgggacctgctcgcgctgcagcgctcgcgctcgctgcgggacccgtccacccgccgctcggtggactcgtcgtcgagggtcgccgccgagccccagggggtcgggctcgggctcggggacgacctccacgacgacagctcccgccccggcggcgcgctcaagacgctgctcgaccagctcgcggagaacccgcagcccaagccgtctcgcggcccgcggcgccggttcaagggcggcgcgggccggcgcgccgctcccgcgtccgccaccggcggcgctctagatcgcggcgtggacggcgccgccgccgtctcggtgaactccagctcgcaggaggccgtctgcggcaacaagtacctcttcggcgtcgtcggaggcgacgacgacgacgacgacgagtgcggggtggagctgcagaggccgcaggcgtcgcaggactcgcgcaatgtgtgcggcatcccctggaattggtcacgcatccaccaccgcggcaaatccttcctcgacatggccggccggagcttctcgtgcggcctctccgaccccaagtcggcgtcggcggcgcggaggtccattgccgccacctccgcaggctcgtgcggtcacatggacggctcgcgttcgcatccgcatttcccggtcacggcgaggctgacctcgaccagttcggactcagactcgttgcctctgctcgtcgacggcgtgcgcaatggcatcggtggcattgccaggagcttctcgggggagctcgggatattctcgaatcagaccagtgagcttgattctgacctcgcatcagaggcacggtcggggcagaggtcacggggctcgcatcgaggccggcaccagagcctcacgcagaagtattcgcccaagactttcaaggacatgattgggcagagcttggtggtgcaggctctctccaatgccatcctgaagaggaaaattgggttggtgtatgtgttctacgggccgcacggcacaggcaagacatcatgcgctcgggtgttcgcaaaggcgttgaattgccattctcctgagcacccgaggccctgtgattcatgtgcgtcttgtatcgcacacaatctgggcaagagtaggagcttagtggagattgggcctgttggtaacattgaccttgacagcattgtggatatccttgataatgtgatgctttcacctgtaccaactcagcacagggtgtttatagtagatgattgcaacacattgccacctgatacgtggagtgtcatatcgaaggtcatcgaacgtgcacctcggcgtgtggtttttatcctcatcagccccaatcttgatctcccacatataatcgtgtcgaggtgccaaaagttcttctttcccaaactgaaggagtgtgacattgtcaacactttacagtggatttctactagcgaaggactagatgttgatagagatgccctgaaacttattgcttcccggtcagatgggtcactgagggatgcagagatgactttggatcagctgagcttgcttgggcagagaatctcaatgtcgcttgtccaagaacttgtcggcttggtttctgatgataaattggttgatttgcttgatttggcactgtctgctgacactgtgaacaccgtgaaaactttaagagatattactgaaacaggtgttgagcctttggccctgatgtctcagcttgccacaataattactgacatccttgctggcacctatgcattcacgcaggaaagggttcgaagaaaattcttcaaatgtccaaccttatcaaaagatgacatggaaaaactacgccaggccttgaaaacactctctgaagctgaaaaacagttgagggtctctaatgataagatgacgtggcttacagctgctctgcttcaacttgctcctgataaacaatatgttctgccgagttcatccacaagtgcaagctttaaccagggcctgcttacctgccctgagggggacataggaaggagcactgctatagatcacactaacatatatgctggtcctcatggtttaccaagaaatgctaatctgggggttgattctgacaacaacatggcaggcacccggagaggaaagggacctgcaccaactgtgcaactaatgttcagctctcgtgtgaataaatccaaagctgagaggtcaagggaacaagttctacatgcatttgagtctgtccttgcttctgctataacacttgaaatccggtacgaaccaaaggatgatgcaagggcaggtcatgttccagctatttcaccgtatcctgaggatagcacttccaatgtggcattaaggaggtctttcactagacatagttccgcttcttccagaggtgaaaacttaattaggagacttcaaaaagacaacgtggtccatggtgctaattcaaatcagacacgatgggtgcaatcagatccacatatattgactgaaggtgaaattatagaagtaggaccttctcaagtggactggcatagtgaaccaaataacagcgccggtgtcagaaaagaaaacatagttcttcaaggacgagaagttgtgaataatgagcatggccgacaaaacagcatagtaaggggcaaggtatctcttgctcatgtcattaacaaggcagaaacttgttcacaacaaggaggagattggagcctaagtcgagtttactttgttggaaggcttcaagcactactagacgaaagggtacattccattggatatttggatcttcctctattcgagagcatgcagttgctggccttttctctgaaggaaacaccgtacataaaggctgcagcattgcagccagcatatgctcttagccaggtatatccaagagagaagaggtga</cdnaseq>

Protein Sequence

<aaseq>MPAPAATAAAGMGSGGGGGGSGEHHMRGHAHLTNCIHLRHHHAH GLGAGSASSGRRRSPTGSSASASAALMRDLLALQRSRSLRDPSTRRSVDSSSRVAAEP QGVGLGLGDDLHDDSSRPGGALKTLLDQLAENPQPKPSRGPRRRFKGGAGRRAAPASA TGGALDRGVDGAAAVSVNSSSQEAVCGNKYLFGVVGGDDDDDDECGVELQRPQASQDS RNVCGIPWNWSRIHHRGKSFLDMAGRSFSCGLSDPKSASAARRSIAATSAGSCGHMDG SRSHPHFPVTARLTSTSSDSDSLPLLVDGVRNGIGGIARSFSGELGIFSNQTSELDSD LASEARSGQRSRGSHRGRHQSLTQKYSPKTFKDMIGQSLVVQALSNAILKRKIGLVYV FYGPHGTGKTSCARVFAKALNCHSPEHPRPCDSCASCIAHNLGKSRSLVEIGPVGNID LDSIVDILDNVMLSPVPTQHRVFIVDDCNTLPPDTWSVISKVIERAPRRVVFILISPN LDLPHIIVSRCQKFFFPKLKECDIVNTLQWISTSEGLDVDRDALKLIASRSDGSLRDA EMTLDQLSLLGQRISMSLVQELVGLVSDDKLVDLLDLALSADTVNTVKTLRDITETGV EPLALMSQLATIITDILAGTYAFTQERVRRKFFKCPTLSKDDMEKLRQALKTLSEAEK QLRVSNDKMTWLTAALLQLAPDKQYVLPSSSTSASFNQGLLTCPEGDIGRSTAIDHTN IYAGPHGLPRNANLGVDSDNNMAGTRRGKGPAPTVQLMFSSRVNKSKAERSREQVLHA FESVLASAITLEIRYEPKDDARAGHVPAISPYPEDSTSNVALRRSFTRHSSASSRGEN LIRRLQKDNVVHGANSNQTRWVQSDPHILTEGEIIEVGPSQVDWHSEPNNSAGVRKEN IVLQGREVVNNEHGRQNSIVRGKVSLAHVINKAETCSQQGGDWSLSRVYFVGRLQALL DERVHSIGYLDLPLFESMQLLAFSLKETPYIKAAALQPAYALSQVYPREKR</aaseq>

Gene Sequence

<dnaseqindica>1..1764#2203..2422#2728..3057#3864..4412#4749..4809#6120..6207#6623..6682#atgccggcgccggcggcgacagcggccgcggggatggggagtggcggcggcggcggcggcagcggcgagcaccacatgcggggacacgcgcacctgaccaactgcatccacctgcggcaccaccacgcgcacgggctcggcgccgggagcgcgtcgtcggggcggaggcggagcccgacggggtcgtccgcgtcggcgtcggccgcgctgatgcgggacctgctcgcgctgcagcgctcgcgctcgctgcgggacccgtccacccgccgctcggtggactcgtcgtcgagggtcgccgccgagccccagggggtcgggctcgggctcggggacgacctccacgacgacagctcccgccccggcggcgcgctcaagacgctgctcgaccagctcgcggagaacccgcagcccaagccgtctcgcggcccgcggcgccggttcaagggcggcgcgggccggcgcgccgctcccgcgtccgccaccggcggcgctctagatcgcggcgtggacggcgccgccgccgtctcggtgaactccagctcgcaggaggccgtctgcggcaacaagtacctcttcggcgtcgtcggaggcgacgacgacgacgacgacgagtgcggggtggagctgcagaggccgcaggcgtcgcaggactcgcgcaatgtgtgcggcatcccctggaattggtcacgcatccaccaccgcggcaaatccttcctcgacatggccggccggagcttctcgtgcggcctctccgaccccaagtcggcgtcggcggcgcggaggtccattgccgccacctccgcaggctcgtgcggtcacatggacggctcgcgttcgcatccgcatttcccggtcacggcgaggctgacctcgaccagttcggactcagactcgttgcctctgctcgtcgacggcgtgcgcaatggcatcggtggcattgccaggagcttctcgggggagctcgggatattctcgaatcagaccagtgagcttgattctgacctcgcatcagaggcacggtcggggcagaggtcacggggctcgcatcgaggccggcaccagagcctcacgcagaagtattcgcccaagactttcaaggacatgattgggcagagcttggtggtgcaggctctctccaatgccatcctgaagaggaaaattgggttggtgtatgtgttctacgggccgcacggcacaggcaagacatcatgcgctcgggtgttcgcaaaggcgttgaattgccattctcctgagcacccgaggccctgtgattcatgtgcgtcttgtatcgcacacaatctgggcaagagtaggagcttagtggagattgggcctgttggtaacattgaccttgacagcattgtggatatccttgataatgtgatgctttcacctgtaccaactcagcacagggtgtttatagtagatgattgcaacacattgccacctgatacgtggagtgtcatatcgaaggtcatcgaacgtgcacctcggcgtgtggtttttatcctcatcagccccaatcttgatctcccacatataatcgtgtcgaggtgccaaaagttcttctttcccaaactgaaggagtgtgacattgtcaacactttacagtggatttctactagcgaaggactagatgttgatagagatgccctgaaacttattgcttcccggtcagatgggtcactgagggatgcagagatgactttggatcagctgagcttgcttgggcagagaatctcaatgtcgcttgtccaagaacttgtaagtgatccaacaatagttatcaaaatttcttctttattgagtatactactggtttctaatttcagagagaatttaaatgatagtagtaaaacattctttgttcaagctattgtaattctataattctgaaacatgctattgatttaattattgggactctagcattggttgacatacttaagtttagcgttgaacgtgtgcaaaattttgacacttggaccatgaaggcgggctaaagagtactctggaaaagttcagtctttttactcaattttcgctttctaaacattgtgcgcattctaaatgttgtttactaaacattgtataaattctaacagtagcaataaaataacctgctattatattattggataaaaatacttcatttaaaaatttacctgacaataacaactggacattgtttgctttggacaggtcggcttggtttctgatgataaattggttgatttgcttgatttggcactgtctgctgacactgtgaacaccgtgaaaactttaagagatattactgaaacaggtgttgagcctttggccctgatgtctcagcttgccacaataattactgacatccttgctggcacctatgcattcacgcaggaaagggttcgaagaaaattcttcaaatgtccaacctgtaagcaatatcactccctttttatcactctcttcagatggatttatagttgggttgatccatccatgagtcatgtattgtaaaagtcatgctctagcatttttttctcaccaatgtattgttatccttttatagatctggctatactagtacatattttatttacgcctttcctttatagaaagaatacattgttgactgggctagtagtacgtggatcgctgatctctccttttttagtagcattcatgttacctaaacattcttcttccacacaatctaacatcttaatatatggattacagtatcaaaagatgacatggaaaaactacgccaggccttgaaaacactctctgaagctgaaaaacagttgagggtctctaatgataagatgacgtggcttacagctgctctgcttcaacttgctcctgataaacaatatgttctgccgagttcatccacaagtgcaagctttaaccagggcctgcttacctgccctgagggggacataggaaggagcactgctatagatcacactaacatatatgctggtcctcatggtttaccaagaaatgctaatctgggggttgattctgacaacaacatggcaggcacccggagaggaaagggacctggtgaacatacaccagacaaccatgtattattagcgcgtgctactagagtgaatttatctagatacagaaaaagtgacaatgagatgatttggcaggctgtactagagcatatccgatcagattcagtgagaaagatgctggctaaagaagcacgactgatttctgtcagcctaggcacaggcaagatattccttcttgctcattctctgtatattactagttatatcatgtctaaatttcattgcagaatacatccaaggatgacctattattgttttaagtaatgcgatggataaatatgctgtttcataagtaatcaagcaataagatagaatggcttgctatgtgtgcctgtaaacatctcaaccgttgaaatttattgaagtaaaggtgcctgatacctctagtaccctccaaacaccataaatcgctttgttcaagtaatatgcgtcaatcttggtgcctaggccatgtaatagtacatgttttctatactataagatatatctacctctcatttctcaataccgcatacctcccaaggaccataaaatatctcatgtaaataaaataatatgcatctccacatggtgactaaattttcatgctagaattgatgagagcaagtttaaaactttgttgatgttattaagacacacatagccccccaaaaaactaagcatgccagattccttgaaaacgtgtaatatgttttgttttaagaatattgtgttggcgaaataatagctacactgtttccattttccaatatatcttgcttctaacacttagttcttttcctccagcaccaactgtgcaactaatgttcagctctcgtgtgaataaatccaaagctgagaggtcaagggaacaagttctacatgcatttgagtctgtccttgcttctgctataacacttgaaatccggtacgaaccaaaggatgatgcaagggcaggtcatgttccagctatttcaccgtatcctgaggatagcacttccaatgtggcattaaggaggtctttcactagacatagttccgcttcttccagaggtgaaaacttaattaggagacttcaaaaagacaacgtggtccatggtgctaattcaaatcagacacgatgggtgcaatcagatccacatatattgactgaaggtgaaattatagaagtaggaccttctcaagtggactggcatagtgaaccaaataacagcgccggtgtcagaaaagaaaacatagttcttcaaggacgagaagttgtgaataatgagcatggccgacaaaacagcatagtaaggggcaaggtatctcttgctcatgtcattaacaaggcagaaacttgttcacaacaaggaggttggtctagacaaaaagctatgtcgattgcagagaagctagagcaagagaatttgtaagtagttctatgctactctcttgtactagaggagtacttttttcagcagatactctggaggggaacagatgatacccaaattaaaaaaaaataatattgcactaaaacaagcacttgatacagcactgcacatattcagtagtttatgaaaaatttttagagctgcaaagtcttattttatcctagaaattttccacatgaatagagctatcaaataggattcatccacattatataagaagcttgggtatgattttggattattgatctatttgcaggagattggagcctaagtcgagtttactttgttggaaggcttcaagcactactagacgaaaggtaatgctaataaacatatgccaaatagaaacaaaagtactttgtaaaagggtattctttagcaatactcagtttagtactaaaagaacagctgctgtatgttatatggcatataacatttgttgctgatcaattgatgataatatgctaatcctgttttctcataattcctctgtatgcggtgatcttttctcacacatgctgaccattttcactgcagctctctgcattgaagatgaggacacgaagatcacgggctctatcaagacttgccttttgtggaaagtgtatttcaactaagtctccaagatgaaacattgacgctgagaacccctagattttacatgtagctaacttatatgcataatttatttcatgtaactgtagcgatctgtaggcgagtagattcttctgtatatcgtttttttgacatgcatgtagaagagagaaaagaaatgtcacaagttttaattattctccaagaaatatttgaagccagcgactcttgctcttaaccatatcaataaaccctatttgtcctatttctaatcatgcagagcaactgcaggagcgattgcctgctgtgagaaccatcctgagtaaacctgcagcaaggcagtccattattatcatattcagtgacaaaagcgagctaatgtgaagttctgaacatgcattgcgaaatgagattgcattatgggacgagaactgcatggctgtgttggtgaatcgcagggcaattctcctttggcacgcatggctagctagagatttttcaccgcatgccttgcctccgtacgtgccaaaggagaaaccgccctgtaattcgccggtcgcacactgcatactgtggctgaatctgaaatcctgaaccttaacatttctgaattttgaagctctcttggaagaaccttttttttttttttttggtgctgcaagctctcttggaagaacatggttgtgccttgacctcgcttatatagctcgccatcggcctcgagatatggatctaagatggcatatgctccttggcagaacgaggactattcgagaggaacaaccgagccatgaacctttatttgccgatgcaccatctcttgatctctctttcaggtttcctttggaatattgtgctccagcaatggtcctccctgtcgctcatctgcatgcctatctactactaaaagcaacctgcctttcttgatcttcagtagatcagtgattgtgattctaagctttgcgttggccctcggcagccacgagctcaaattgttctcatggtttgaattgagatgatggtactgctacagggtacattccattggatatttggatcttcctctattcgagagcatgcagttgctggccttttctctgaaggaaacaccgtacataaaggtatggcacctcttcagcaatgaccggctagcattcgttccttttcatcagcgatggtgaattcatggtgaaatttgctaagtccttttaataggaggtcaatacataagtttggatacacgacctgaaattcttcagctgtaattctgtaaacaggagttgagattttttggacattgtatcaggtctgaaagtgaagctcgcatgctctctgaacatcttcgatattttcatttagcaaagagagaaatacctgcacttctggatgcagatttaagttaaacggaatatgcgtgttacacaaggaaaaaaacagttcgcattacttgttcttgaacaccaattgagggcataatgcttcagcaaatcagcactgctacatttctccgaccttccagctgctttctgcatgcaggctgcagcattgcagccagcatatgctcttagccaggtatatccaagagagaagaggtga</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0529600, RefSeq:Os05g0529600