Difference between revisions of "Os05g0552400"

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(Created page with "{{JaponicaGene| GeneName = Os05g0552400| Description = RINGv domain containing protein| Version = NM_001062790.1 GI:115465310 GeneID:4339540| Length = 2038 bp| Definition...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os05g0552400|
 
GeneName = Os05g0552400|

Revision as of 20:14, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os05g0552400

Description

RINGv domain containing protein

Version

NM_001062790.1 GI:115465310 GeneID:4339540

Length

2038 bp

Definition

Oryza sativa Japonica Group Os05g0552400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:27544841..27546878

Sequence Coding Region

27545100..27545333,27545570..27545641,27545742..27545809,27545892..27546018,27546099..27546179
,27546277..27546369,27546491..27546574

Expression

GEO Profiles:Os05g0552400

Genome Context

<gbrowseImage1> name=NC_008398:27544841..27546878 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:27544841..27546878 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggaccactttgcagtaatggccggccggttgctaacggaatcgactgttcagtctgccattgatgaggcctctgctgctgccatgccttcttcagtgattgcttctgaacataatgatgttcaagatgagagggagaagagtggtgttcttgtagaatgtagaatttgccaggaagaggatgatcagacctacatggagaccccttgctcctgcaggggcagcttgaagtatgctcatcgcaaatgcattcagaggtggtgtgatgagaagggagacaccatatgtgagatatgcttacagcaatacacaccaaactacacagcacctgcaaagttgtttcaacatggaagaaactcaattttcttcagaactcctggttacattcaagcacaggtcatgcaaaacacagaccgaagtgctgctgcctcaacaagctacgatcctgaactccccaacccaaaaggtgtaatctattgtcgcatagttgctctaactctgatggtactcttgctactccacgacgcaatctcggttttcctcggtgatcacgatgcttacaccgtcgcaatgatcactctgctgatgcttagaacggctggaatcgttatacctgtgtacatcatcttgctgtccttaactgaactgcttcatcgacgcaaccagcggcagatttcagacgctgctgctgcggtgaacatcaaccagcaggcgccacagtcaccgcggcgacagcatgtcatcagcatccaataa</cdnaseq>

Protein Sequence

<aaseq>MADHFAVMAGRLLTESTVQSAIDEASAAAMPSSVIASEHNDVQD EREKSGVLVECRICQEEDDQTYMETPCSCRGSLKYAHRKCIQRWCDEKGDTICEICLQ QYTPNYTAPAKLFQHGRNSIFFRTPGYIQAQVMQNTDRSAAASTSYDPELPNPKGVIY CRIVALTLMVLLLLHDAISVFLGDHDAYTVAMITLLMLRTAGIVIPVYIILLSLTELL HRRNQRQISDAAAAVNINQQAPQSPRRQHVISIQ</aaseq>

Gene Sequence

<dnaseqindica>260..493#730..801#902..969#1052..1178#1259..1339#1437..1529#1651..1734#acctcctcgaattgtcgaggaagctcatgccttgatttttctctgttttgaactgcaattgcaggtaatgatcgtttgctatgctcaattgctcacttcttcgtgaaatggaaaagaatcatcttgagccgtcagataaacatgttcagatacacaatttgctttttttttcttgcaaattacattcatatttgtatttgtaaacgatgtgttctgatttgatctttattgtgcttggattttcttaactttctcagggatggcggaccactttgcagtaatggccggccggttgctaacggaatcgactgttcagtctgccattgatgaggcctctgctgctgccatgccttcttcagtgattgcttctgaacataatgatgttcaagatgagagggagaagagtggtgttcttgtagaatgtagaatttgccaggaagaggatgatcagacctacatggagaccccttgctcctgcaggggcagcttgaaggtaaaattcagtatcaaactaattaaattccgtttctgcaattcggggtatgccagatttagttgttaaacaactttattggtcaaggaatctatttaggccatcaacgtattttgcttctgcacaggatatttttaggcttatgataaattttgttcctgtatttcagacctcttaatctgtagtagtgctgcgaaataaattttgtaacagtgctatatacatgtttctttcagtatgctcatcgcaaatgcattcagaggtggtgtgatgagaagggagacaccatatgtgagatatgcttacaggtgaaattttcaccgaacacctagtactcatggccatctcaaaacaagttgctcctacaaagaaattaacatatagtagcctgtatttctgtggatacagcaatacacaccaaactacacagcacctgcaaagttgtttcaacatggaagaaactcaattttcttcaggtaattgatgtatcatcacaaaagaagcacgattctgagcttctgattagacatggatcatctcaagctttatcatttgcagaactcctggttacattcaagcacaggtcatgcaaaacacagaccgaagtgctgctgcctcaacaagctacgatcctgaactccccaacccaaaaggtgtaatctattgtcgcatagttgctctaactgtaagtgcctgaaaaaaaaaagaatcatcatttcgtgccaccaccaaaaattaacattcagacacactcaaattcatcagctgatggtactcttgctactccacgacgcaatctcggttttcctcggtgatcacgatgcttacaccgtcgcaatgatcactgtaattctctgaattctcagataatagcacacatattgatattaccctactactttgatgattgattatttgagccaaaatcatgcttctgaaccagctgctgatgcttagaacggctggaatcgttatacctgtgtacatcatcttgctgtccttaactgaactgcttcatcgacgcaaccagcggcaggttcaccaacctcattctgaattcttgatataaaagacacaatctgcagttcaatgctgctgaacaatccatgcagcttgtttcacactgcaatctaaccgtcagaaaatgcaattgccagatttcagacgctgctgctgcggtgaacatcaaccagcaggcgccacagtcaccgcggcgacagcatgtcatcagcatccaataagttcagagatggaacatgtgtacgtgtatatacaaaggcatgtcacttggatgaggttttgggctcaagatgtgcgatcaagatacgaagatatgcaagacattggtgtgatgtgtgagtagttgctctttgtaaatattgtgaaaaaaaaagtgcatgcgtaagcggccactcgcttcttaagtaaatcaagatgaagtgagattactgtacataagaagaatacagacaatacacgatgaaaatgggtacagctgatgtacctgcttaagttgaaagtaacatgagatttttttttgagggt</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0552400, RefSeq:Os05g0552400