Difference between revisions of "Os05g0563400"
(Created page with "{{JaponicaGene|
GeneName = Os05g0563400|
Description = Similar to Auxin response factor 5|
Version = NM_001187594.1 GI:297724318 GeneID:9268260|
Length = 5353 bp|
Definit...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os05g0563400| | GeneName = Os05g0563400| | ||
Revision as of 20:14, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os05g0563400 |
|---|---|
| Description |
Similar to Auxin response factor 5 |
| Version |
NM_001187594.1 GI:297724318 GeneID:9268260 |
| Length |
5353 bp |
| Definition |
Oryza sativa Japonica Group Os05g0563400, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 5:28115960..28121312 |
| Sequence Coding Region |
28116183..28116467,28116557..28116613,28116722..28116892,28117007..28117091,28117717..28117807 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008398:28115960..28121312 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008398:28115960..28121312 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgaccgggatcgacctcaacaccgtcgaggaggacgaggaggaggcggcggaggaggtggcggcgaacggctcgtctccggctccggcgagggcgggcgcggtgtgcctcgagctgtggcacgcctgcgccgggcccgtggcgccgctgccgaggaaagggggcgtcgtcgtgtacctgccgcaggggcatctcgagcacctcggcgacgcgcccgcggcggcggcggccgcggccgccgtgccgccgcacgtcttctgccgcgtcgtcgacgtcaccctcctcgcggacgcggcgaccgacgaggtgtacgcgcagctctcgcttgtcccggagaaggaggaggtggcgaggcgggcggacgacggcgagggcgaggacggggacggcatgaagcagcggttcgcgcggatgccgcacatgttctgcaagacgctcacggcgtccgacaccagcacgcacggcggcttctccgtgccgcgccgcgccgccgaggactgcttccctccactggattacagccagcagcggccgtcgcaggagcttgttgccaaggatttgcacagcactgaatggaggttccgccatatttaccgaggccagccacgtcggcaccttttaaccacaggttggagtgcatttgttaacaagaagaagcttgtttctggggatgccgtactatttttgcgaggtgatgatggggagctaagactgggagttcgccgtgcagctcagcttaaaaatgggtctgcttttccagcactttacaaccagtgttctaatcttggtacacttgccaatgttgcacatgcagtggctacagaaagtgtgttcaacatatactacaatcccaggttaagtcagtccgaattcattgtaccctactggaagttcatgaaaagcctcagccaaccattttctgttgggctgaggttcaaaatgagatatgaaagtgaagatgctactgaaagaaggtacaccgggataattactggaagtggtgatacagaccctatgtggcatggttcgaaatggaaatgtttgttggtgaggtgggatgacgacgctgagttccgtcgaccaaacagggtctctccttgggagattgagctgactagttcagtgtcaggatcccatttgtccacaccccattcaaagcgattgaaaccatgtcttccccatgttaatccagaatacatggttccacgtggaggtggttgtcctgattttgcggaatctgcccaattccacaaggtcttgcaaggtcaagaattattgggttttaaatctcatggtggtactgctgctgctacttctcagccatgtgaagcaaggcatttacagtacatcgatgagcggagttgctccagcgatgcgagtaacagtatcctaggggttccaagacttggtgatagagcaccacttggaaacccaggattttcctaccattgctcaggctttggggagtctcacagactccaaaaggtcttgcaaggtcaagaattatttcgtccctaccgaggaactttggttgatgcgtctatgggtagtaatgggtttcatcaacaagatagtcctcgtgcaccaggtgtggtgaataaatggcaggcacaacttcatggccgtgctgcttttcatggaccaccagcactggctcttccatctcaatcatcatctccgccatctgtcctaatgtttcagcaagctaattcaaagatgcccaggttggagtttgggcatggacagttggacaagcacgagaatgataggcgtgttaggtttggtccttctgaaggaattgaaagaagagagcaaagaataccactccagccttatcctacttctggagaagtgatagatggacaggttacagttgagaagtctcactcccctggtcgacatggaaaggatggtccagataacaaagctgttggcacaaatagttgcaaaatatttggcatctctttgactgagaaggttccagcaagagaagaactagatgatggcgacgccaactattcactccagtctttgaagcaagtgccaaaatccctgggcaatagttgtgctaccgttcatgagcaaaggcctgttgttggcagggtgattgatatttcaactatggatatgatgatctga</cdnaseq> |
| Protein Sequence |
<aaseq>MTGIDLNTVEEDEEEAAEEVAANGSSPAPARAGAVCLELWHACA GPVAPLPRKGGVVVYLPQGHLEHLGDAPAAAAAAAAVPPHVFCRVVDVTLLADAATDE VYAQLSLVPEKEEVARRADDGEGEDGDGMKQRFARMPHMFCKTLTASDTSTHGGFSVP RRAAEDCFPPLDYSQQRPSQELVAKDLHSTEWRFRHIYRGQPRRHLLTTGWSAFVNKK KLVSGDAVLFLRGDDGELRLGVRRAAQLKNGSAFPALYNQCSNLGTLANVAHAVATES VFNIYYNPRLSQSEFIVPYWKFMKSLSQPFSVGLRFKMRYESEDATERRYTGIITGSG DTDPMWHGSKWKCLLVRWDDDAEFRRPNRVSPWEIELTSSVSGSHLSTPHSKRLKPCL PHVNPEYMVPRGGGCPDFAESAQFHKVLQGQELLGFKSHGGTAAATSQPCEARHLQYI DERSCSSDASNSILGVPRLGDRAPLGNPGFSYHCSGFGESHRLQKVLQGQELFRPYRG TLVDASMGSNGFHQQDSPRAPGVVNKWQAQLHGRAAFHGPPALALPSQSSSPPSVLMF QQANSKMPRLEFGHGQLDKHENDRRVRFGPSEGIERREQRIPLQPYPTSGEVIDGQVT VEKSHSPGRHGKDGPDNKAVGTNSCKIFGISLTEKVPAREELDDGDANYSLQSLKQVP KSLGNSCATVHEQRPVVGRVIDISTMDMMI</aaseq> |
| Gene Sequence |
<dnaseqindica>224..508#598..654#763..933#1048..1132#1758..1848#1922..2086#2510..2629#2721..2793#3672..3831#3915..4780#4853..4918#cggcttccccctcattcatggccattaccacgatgtgtcaccccaccccaccaccgcccgctgctccacttctcctcctcctcctcctcctctcctagtagtagcaacctacggacaccacccccacccgcttcatttatcacttgtctccccctctccctcgcctgctccgctgctcttgtgcttcgcgcctcgcctgacctcgctgtcgctgccgccagccatgaccgggatcgacctcaacaccgtcgaggaggacgaggaggaggcggcggaggaggtggcggcgaacggctcgtctccggctccggcgagggcgggcgcggtgtgcctcgagctgtggcacgcctgcgccgggcccgtggcgccgctgccgaggaaagggggcgtcgtcgtgtacctgccgcaggggcatctcgagcacctcggcgacgcgcccgcggcggcggcggccgcggccgccgtgccgccgcacgtcttctgccgcgtcgtcgacgtcaccctcctcgtgcgtcccttctcaatgctcgtatcgtacgtgttctcgtcttcacggcggcgcgaggggattgattggctttgtgttcttctctgcaggcggacgcggcgaccgacgaggtgtacgcgcagctctcgcttgtcccggagaaggaggtgcgcgcccgcctgcgcgaagcagttggagcatttggtttgatgattccgttttttttttttgttttttgacctgagttttcttctcttctcttccggggattgaaggaggtggcgaggcgggcggacgacggcgagggcgaggacggggacggcatgaagcagcggttcgcgcggatgccgcacatgttctgcaagacgctcacggcgtccgacaccagcacgcacggcggcttctccgtgccgcgccgcgccgccgaggactgcttccctccactggtcggtgtatattggagaaagaaaaagaaaagcttccttttttgaagtaaagattttatctttttttgggggtttgtttagctgatgaaatccttcggattgggaaccttgcaggattacagccagcagcggccgtcgcaggagcttgttgccaaggatttgcacagcactgaatggaggttccgccatatttaccgaggtagagcagaaaaaaaacatggactttgagaacaagtttttttttaacctgttttgatgactgagatgctctacgcagctgtgccatgcatgcattccatcttcattaggcttctgtactgtgcatgcacttcccctggctggaagcctctgcgtcctgaatgattcaatggggattgaatattagtactggatttgtgctttagttgtttctgacgaccagcgcgtcttgttcagatagagcagtaatagcttgtgaatacacacatgcatcaaccgagctcaccgagaacttgcactttgcggttatgatcgacatctgtactttttgcatatccacctgttttatgatgctaaatcatgactgggctgacatgatatgattgtatgcaatgtgttgattctccaaacactctaatatgtgttggctaggctacattatgtttctccatagctccgacattgttagttaatcaatcatgtttaactgtattttacattttttcttctttcttaaaaacctttgtattgtaatgtctggtcccttcttgaggattgcaaaggacaaacataacaagttaagtggtccttgatttctgatagatctacatctgaatatgctacaggccagccacgtcggcaccttttaaccacaggttggagtgcatttgttaacaagaagaagcttgtttctggggatgccgtactatttttgcggtaggccactcgatcattcagataattatcacatgttgacgatcttttctaaagattcttaatcaatctgcagaggtgatgatggggagctaagactgggagttcgccgtgcagctcagcttaaaaatgggtctgcttttccagcactttacaaccagtgttctaatcttggtacacttgccaatgttgcacatgcagtggctacagaaagtgtgttcaacatatactacaatcccaggtaatgaagaacctcgagttattttgttaatgctcccgacagctgatgttctagaactttcttgctgttggctggtggcagccttaaattgtgcccattatttactgcttgtttgagctatttgttgatagtcatacattatgccagctcagcatgtgcaatcacatggttttatctggttgcatttgtagtcttgctgaaattcgaagttaggcgctgttgcaatagcttggaaagttgtatttgtaggttgtaactgttctttttaaaacaaaagattatatgaacagaatcaatagtctcgtttcatatatttatcaatgtagtcgttttgcatttgatgctttacagagctagcgcctacttctgttcttgcaacaaaacagtgtcttatttcaaagctctcttctgaaatattgacaggttaagtcagtccgaattcattgtaccctactggaagttcatgaaaagcctcagccaaccattttctgttgggctgaggttcaaaatgagatatgaaagtgaagatgctactgaaagaaggtagatggacaatagttctacacttgtactagaatggactgaactgcattctagattggtgatgcatatgtgataacttataattttacaggtacaccgggataattactggaagtggtgatacagaccctatgtggcatggttcgaaatggaaatgtttgttggtaaactaccctatctcttgtgcctcgtaatatatgtttatgggcatctgctgtgtattcaattaacattttttttgtagtgttgctgccatttcactaattaaacccttgtttttttcctagtgccgcgtggcatttgcatcatgtggccatcttgacttgtttgtttggattatattttacatataacaagaatttgatgctaatcttggttcccaaatttgctagcatggaacccattcactctattaactgatgtagcagttgagctttagtttacatattactaaaacacagtttagttgtcttgatgcattttgtttcttatccaaactcaagtcagatagtagtgatttttcatgaactcaatctggaaagtaacaggttttcagataattgagcactgcggtactattacacaatgtcagcttacatggttatgttttcagagtgacagttgcactgactagcaagtttggttgctcacaataacagtcttagatttgaagatatcagttaatcttcctggtttgttttcaaaagtggtaatcttaacttgcaatttgacttccactagtagtttttgtagctagtctagagctgtgttctacactcagcctggtttcttcagcgaaatattaggtggatgaagttatggacactgctagcttgatcttcttttgaaattttaccttccaggagtacttaggcatgtgaaagtttttagactatggctctcctgagttaaaatttcaatttttgagcacataattctgttctcatggccacaccataagtcccgtaaaagccattattgcaatcagatcctctttatgaccatatgtatatgatttatcgacctatgtctaccttggtaggtgaggtgggatgacgacgctgagttccgtcgaccaaacagggtctctccttgggagattgagctgactagttcagtgtcaggatcccatttgtccacaccccattcaaagcgattgaaaccatgtcttccccatgttaatccagaatacatggttccacgtatgtctttcttctagctattaccagttaataggatggttctgttggatgcactgtgccgatttaatttatccttttgtcaggtggaggtggttgtcctgattttgcggaatctgcccaattccacaaggtcttgcaaggtcaagaattattgggttttaaatctcatggtggtactgctgctgctacttctcagccatgtgaagcaaggcatttacagtacatcgatgagcggagttgctccagcgatgcgagtaacagtatcctaggggttccaagacttggtgatagagcaccacttggaaacccaggattttcctaccattgctcaggctttggggagtctcacagactccaaaaggtcttgcaaggtcaagaattatttcgtccctaccgaggaactttggttgatgcgtctatgggtagtaatgggtttcatcaacaagatagtcctcgtgcaccaggtgtggtgaataaatggcaggcacaacttcatggccgtgctgcttttcatggaccaccagcactggctcttccatctcaatcatcatctccgccatctgtcctaatgtttcagcaagctaattcaaagatgcccaggttggagtttgggcatggacagttggacaagcacgagaatgataggcgtgttaggtttggtccttctgaaggaattgaaagaagagagcaaagaataccactccagccttatcctacttctggagaagtgatagatggacaggttacagttgagaagtctcactcccctggtcgacatggaaaggatggtccagataacaaagctgttggcacaaatagttgcaaaatatttggcatctctttgactgagaaggttccagcaagagaagaactagatgatggcgacgccaactattcactccagtctttgaagcaagtgccaaaatccctgggcaatagttgtgctaccgtgagtgttttatgatgagtaattttcatgcactcagtaatgtaaactgctttttaactaaaagctctgcaggttcatgagcaaaggcctgttgttggcagggtgattgatatttcaactatggatatgatgatctgatttatgagctggatttgcaaaattatctggaggtgaagtaacactaggattgcttccaaccacatgttagtgatactccaaaggcataaaatcctcacctgtgacagttttacctagaaatgttatgatcattgttttgccgttgttccagattttgctgtggatctccagatggtggccgagtatcagggagatggagggactgatgattctgatatttttatcttagatgtaggcgttggagcacttatcatgtgacatagtacctagctgctcgtctgcatttgttgcctctgcaactttaactgtcagcggcatttgtcgccgctggaaccatctaagtacgtgtttataagctgtaagctatgacaagcgcattagagggtgctggtactgttagaacattaattaatgtcagtagcatgctttgatctt</dnaseqindica> 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