Difference between revisions of "Os05g0568900"

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(Created page with "{{JaponicaGene| GeneName = Os05g0568900| Description = Similar to Protease Do-like 1, chloroplast precursor (EC 3.4.21.-)| Version = NM_001062895.1 GI:115465520 GeneID:4339...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os05g0568900|
 
GeneName = Os05g0568900|

Revision as of 20:15, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os05g0568900

Description

Similar to Protease Do-like 1, chloroplast precursor (EC 3.4.21.-)

Version

NM_001062895.1 GI:115465520 GeneID:4339651

Length

3528 bp

Definition

Oryza sativa Japonica Group Os05g0568900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:28396664..28400191

Sequence Coding Region

28396996..28397073,28397154..28397288,28397677..28397829,28397916..28398114,28398218..28398255
,28398755..28398926,28399572..28399694,28399775..28400190

Expression

GEO Profiles:Os05g0568900

Genome Context

<gbrowseImage1> name=NC_008398:28396664..28400191 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:28396664..28400191 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgccgcctcctcctctgccgccgcctgcttcctctccccgtcccctcctccccgcccgcgccaccattccatcaaacacctcgcgtgcgccgcctccaggtcgccgtcgccggggccctcctcctcccgctccctcgccctcccttcgccttcggcttcggcttctccgtggccgtggccgcggcggctccgcgacctgctccccgacgagaccggccggatcctgtcgtccgccacgggctccctcatcgtcgccctcgcctcggccgcgctgatcctcggcgacgccggctccgcctccgcgttcgtcgtcgccacgccgcggaagctgcaggccgacgagctcgccaccgtgcgcctcttccaggagaacacgccctccgtcgtctacattaccaacctcgccgtgaggcaggatgccttcacgctggacgtgctcgaggtgccgcaggggtccgggtcggggttcgtctgggacaagagcggccacatagtcaccaatttccatgtcatccgtggcgcgtcagatctcagggtcacacttgctgatcagacagtgtatgaagcgcaagttgttggatttgaccaggataaggatgttgctgttttgcgtattaaagcaccaacagataaattaagacctgtaccagttggtgtgtcggcagacttactggtcggtcagaaagtatttgccatagggaacccgtttggtcttgaccacactcttactacaggagtcatcagtggattgcgtagagaaatcagttcagctgcaacaggacgccctatacaggatgtgatacaaactgatgctgctatcaatcctggtaacagtggtgggccacttcttgatagctcaggaaacttgataggtgtaaacactgctatatactcaccttcaggagcatcatccggtgttggcttttccattccagttgatacagttggtggtattgtggatcagcttataaagtttggtaaagtaacaagacctattctagggataaaatttgctccagatcaatctgtagagcagcttggattaagtggagtgcttgtcttggatgctcctccaaatggaccagcaggcaaagcgggtctgcaatcgaccaagcgggattcctatggtcggcttatcctaggggacataattacttctgtgaatggaacaaaggtaacaaatggaagcgacttgtataggattctggatcagtgtaaagttggagagaaggtgactgtggaagtattgcgtggagatcaaaaggagaagatacccgtgattcttgaaccaaagccagatgaatcataa</cdnaseq>

Protein Sequence

<aaseq>MAAASSSAAACFLSPSPPPRPRHHSIKHLACAASRSPSPGPSSS RSLALPSPSASASPWPWPRRLRDLLPDETGRILSSATGSLIVALASAALILGDAGSAS AFVVATPRKLQADELATVRLFQENTPSVVYITNLAVRQDAFTLDVLEVPQGSGSGFVW DKSGHIVTNFHVIRGASDLRVTLADQTVYEAQVVGFDQDKDVAVLRIKAPTDKLRPVP VGVSADLLVGQKVFAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQTDAAIN PGNSGGPLLDSSGNLIGVNTAIYSPSGASSGVGFSIPVDTVGGIVDQLIKFGKVTRPI LGIKFAPDQSVEQLGLSGVLVLDAPPNGPAGKAGLQSTKRDSYGRLILGDIITSVNGT KVTNGSDLYRILDQCKVGEKVTVEVLRGDQKEKIPVILEPKPDES</aaseq>

Gene Sequence

<dnaseqindica>3119..3196#2904..3038#2363..2515#2078..2276#1937..1974#1266..1437#498..620#2..417#aatggccgccgcctcctcctctgccgccgcctgcttcctctccccgtcccctcctccccgcccgcgccaccattccatcaaacacctcgcgtgcgccgcctccaggtcgccgtcgccggggccctcctcctcccgctccctcgccctcccttcgccttcggcttcggcttctccgtggccgtggccgcggcggctccgcgacctgctccccgacgagaccggccggatcctgtcgtccgccacgggctccctcatcgtcgccctcgcctcggccgcgctgatcctcggcgacgccggctccgcctccgcgttcgtcgtcgccacgccgcggaagctgcaggccgacgagctcgccaccgtgcgcctcttccaggagaacacgccctccgtcgtctacattaccaacctcgccgtgaggtagaaatccgccgcgttcgtcctcctcggcttgcctttttttttttcacgcgtactgatgcgaattcgggttgctataggcaggatgccttcacgctggacgtgctcgaggtgccgcaggggtccgggtcggggttcgtctgggacaagagcggccacatagtcaccaatttccatgtcatccgtggcgcgtcagatctcaggtttgttaaaatgacatgctgctgtcgcccacttagagctgaattcgaatcatacttcacaattctgatagatttttttgggtgcatgaagatttgtataggagtgtaaattgctctagacttctagaacttgaaatggatggagtaatgcaaatagatgttggttagctgcagtaatgtggttacagtgacaactgacaacggttcagtgaactgtaaacacttcctactagtgactcattattcaatggcttcctttttcttagtttaatatgttcaaaggtgctatgatatagattagtcatagttgctgacaggattgtgtgtttgaagctttaaaacgattatattttgcatatcattttcattatgtacttaaatgctacacttgagtatttggtgcacaataattcattcccgagcccaacaataacttgcgttttggtttcttctaagccgcatatactagtatgctgtgtacactgttctgctaatgctacatggtgccaacttattgacaatgcattattgcatatagagctaaaacatccatccatctaagatactgttttgatgaattcttatgacataataacctccaacggtatcatggcgaagtgaagttaccacgctagttttatgcagggtcacacttgctgatcagacagtgtatgaagcgcaagttgttggatttgaccaggataaggatgttgctgttttgcgtattaaagcaccaacagataaattaagacctgtaccagttggtgtgtcggcagacttactggtcggtcagaaagtatttgccatagggaacccggtgagtgtttcttacaccaactgttcggtgtattacccattcatgacaactggctcataagcttaataaaatgtattctaacatagtctcaaaaaaacactatccagttctttacttgtgatgtgcacccctgaataatttatttccatagtttcaatgtacttttctgttcagagctgaaacaaccttagaaatccccctagctgttcatgaatatgtctgacattgtaatgaaaatacaatatatgctagagaatattgtacacaaaaaaaatacaattaatcactatgcaaacaaccaatatatcaaaatgatcttatgccactaagactatgtatcgcgtgttttggtgatatctttaggcttttagcacgtattgattcctggatagaaaaatatgcttacaacacttgattattctgagttattttctatcatgcttgcattaacttactgatcactaacagtctgtaacatgttatgtctatgtttatgcagtttggtcttgaccacactcttactacaggagtcatcaggtgtaatgttgtttgagtaaacagattctgtcttttgctgattcataatgcaatacactgagacacctctgttttgtttttctgttgacccccttccctgcagtggattgcgtagagaaatcagttcagctgcaacaggacgccctatacaggatgtgatacaaactgatgctgctatcaatcctggtaacagtggtgggccacttcttgatagctcaggaaacttgataggtgtaaacactgctatatactcaccttcaggagcatcatccggtgttggcttttccattccagttgatacagtatgcaacttgacataaatacaaaactcagagtttcagaattttttattttctattctattaacatctcttttgaacacatccaggttggtggtattgtggatcagcttataaagtttggtaaagtaacaagacctattctagggataaaatttgctccagatcaatctgtagagcagcttggattaagtggagtgcttgtcttggatgctcctccaaatggaccagcaggcaaagcggtattgtccatagatcttatttattggtttcctgtaaattgcagtcagtcttaaaagcattggttttcttgcactaggcatgttccaattacgtgtcaatttgagtttactgggagaacacctgagttattactccataacatcatatgctatgttgattgatgtcctctcgtgtgttttcaatcgtcactaggactaaggacagctgaacagacataacagtgataattcatttagcataaaggctaaccttatgtgattgatagaacaaatcctttttattgcagacactgtattttctttgaacatgttcgtgtaatagaagactagctgcttgctttgaaaatgactggtgcaactaaaacttatacatcttgttgtatgctagggtctgcaatcgaccaagcgggattcctatggtcggcttatcctaggggacataattacttctgtgaatggaacaaaggtaacaaatggaagcgacttgtataggattctggatcagtgtaaagttggagagaaggtaagctttcacacgtttttgtaaggaagaaattgctgtgattgataatagctcaggtacttatgcatattgtgttataggtgactgtggaagtattgcgtggagatcaaaaggagaagatacccgtgattcttgaaccaaagccagatgaatcataatagtaagccacctccataggatccactctactgtttgtatgtccacatagatgcagaaatggaatatatacaagaaattagcattttcccctaccacggaattcgctgtacataattcatgcttgtaaattttctggcaaaaagagaaaatccaatttggcttatttccttgtcattcatgcttctggtgtaaccgcctcagtagagacgtgtcatacgtgatgtctctgttttcctgtattttggtgaggaccatgtacagcagagactatatagtagaccccacactgctccgtaagtctacttaacatggcctaccgtatttacactgc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0568900, RefSeq:Os05g0568900