Difference between revisions of "Os05g0583500"
(Created page with "{{JaponicaGene|
GeneName = Os05g0583500|
Description = PX-associated domain containing protein|
Version = NM_001062982.1 GI:115465694 GeneID:4339743|
Length = 7761 bp|
De...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os05g0583500| | GeneName = Os05g0583500| | ||
Revision as of 20:15, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os05g0583500 |
|---|---|
| Description |
PX-associated domain containing protein |
| Version |
NM_001062982.1 GI:115465694 GeneID:4339743 |
| Length |
7761 bp |
| Definition |
Oryza sativa Japonica Group Os05g0583500, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 5:29094525..29102285 |
| Sequence Coding Region |
29094963..29095091,29095844..29095926,29096150..29096309,29096560..29096695,29096807..29096886 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008398:29094525..29102285 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008398:29094525..29102285 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggcgacggcaggcggcccggggagggcgcacacggtccgcgacctcgcggaggaggggaagaagcgggccgtgctgctcctcgtcttcgccttcggcctcgccttcctcatgtccctgacaagctcctcagtttggattaacttgccatttgccacagctttgattgttttatttcgctacatatcacttgactatgatttccgtagaaagagcacaactaccacagataacgatgccagtcgcgcacttaccaaaacaaaaagtattgaaccaaataaaatcccctctattcaaaaggatggaaagtcagattggaagagcaaggtgaattcccctccagttgaagctgcaattgaacagttcacaaggcaccttgtcacagagtgggtaacagatctatggtactcccgtgtaacacctgacaaggaaggtccagaggaactcatcaatatagttaataatgtcctgggagagatatcagtccgggcaagaaacgttaaccttatcgctctgctaaccagggatctgattgatcttatatgcaaaaatttggagctttatcatttatgccaagccaagattggaaaagagaagtttgttaatctctcgacggagcgtcgtgatgctgaactaaaactgacccttataaccgaaaacaagttgcatccagctttattttcagccagtgctgagcacaagatcctacaaagtcttgctgatgggttgatatcagtaacagcaaaacctcaggatctgcagtgttacttcttccgatgtactgcacgagaacttcttgcatgtgcagtcatgagacctgtcgtgaatttagcaaacccaaggtttataaatgaaagaattgaattgttggctctttctcatgccaacaaggcagaaagaggagttgcagaatcattggagcatgctacaatggttaagcaaagggaacctcctatgccaactgttgatgaacttgctgcactaatagatcccacgagttcaggggttgaacttgtgcgatttagtcaggatcagtccaaagctgcaccagatacgcaactcagtaatactagacatccatctaacctcaaaccaaattcctctagtacttctttgaccaatagttcacatccacttgagtctagcattttatcttccactacccatggtcattcgaattccagtatgtcattgcattcccaaagtagtggcaggacaactgcagaatgttatgagggagaatgggcacagaccatggatatcagctcccagcaaaaaagtcaagccctagcacctgagcaccttgagaacatgtggactaaagggaagaattacaaatcagaaaatgtaaaacatgttgcgagagtaccttccaaatcttcttctctaggcacttctccagtgcagcagtcagctccttacagcacttctgttggtcattatcctagtgctccacaaaggcagacaactatgtctcgttctgatgaccaacatttgattaaacactcaactactgctgcatacttaaatggcaccaatcatctgaggatggctttatccagagaaagtgcagatcatgccagccaagaagactttggagtggacagtgagagttcatatgccactgaggaggatgagaataacaatgtgactgggcttgactctccagtaacgagagtttgggacagcaaaagtaaaggaaatgccacctcatcacatatacaccatccacttgaatctccaggtttccataaagcaaagaagaacagaagtcatattggcaagttgaaaatgacaaaaacttcaggaagaaaaaggtcaaggtcaaattctcaaaagcctcctgtctggcaagaggtggagagatcatctttattggtgggggatgatttaaatatactgaatacatcggcagatgattcaaggacggatggactgtatgatgatactgaggtggaaagtatgtcaaggatgtttagtggtgcgaatgcttcatctttgtcattggcatcaactgactcttcatattcatcaaattattccaccactaatgtgctagaagactcttatttgaagttgaaatgtgaggtggtaggagctagcattgtgaaaagtggatctggcatgtttgctgtatattctgtttctgtgactgatgccaatggtaatagttggtccatcaagaggagatttcgccatttcgaagagctacatcggcgtttgaaagaatattctcagtacaatcttcacttgcctccaaagcacttcctttcgtcagggctagaggtccctgttgttcgagagagatgcaagttgcttgacatatatctaaagaagcttcttcagattcccactgtttcaagctgtatagaggtctgggattttctaagtgttgattcacagacatacatcttcactgacactctctcagttatccagacgttgtcagtcaatttagatgaaagatcaaaagagaagaatacaaaatcattcaattcttcccaagctttgaatgggaatttggtctctgctagccaatctttgcatgtacataaagatgataccatgccgaaggagaaggataaagactttgatgctgttgatggtttgagatcaaggaagaggaacacggaacagaatttaggaattggtgttggcaacacaaatgccaatcttcatgaagacctctctggaagtgaccctgaacagaacgagcattcatttataataaattcgggaaattctaaaaagacactgtcaagtgaaactgactacccgcctcaaagtttggagtctgatggatactcagtagctcctaatgattggatggctccaaatcttagtgtgcccttatttcatttggttgatgtggtttttcagctccaagatggtggctggatcaggaggcaagcattttgggtagtgaagcaaatactgcaactgggaatgggagacacatttgatgactggcttgttgagaaaatccagttacttaggaaggggaggattgttgcttttgcagttaagcgggttgaacaaatactctggccagatggaattttcctgacaaaacatcctaagagaaaagcagcaacacctccacctggttcccagagtaacggcatggccaactatctgactgatgaacaacgactagaggatgctcatcgtgcaaattttgtccatgaactaatgatagagaaagcaccatctgcgttagtgagtctggttggtcgaaaggagtacgaaagatgtgctcaggacgtctacttctttcttcagtctccagtttgtttgaagcagctagcatttgaagtcctagagctccttgtactagctgcatttccagagttggatgacattgtgaagaagtggcatgaagacaaacagcagttgtacgccctggaataa</cdnaseq> |
| Protein Sequence |
<aaseq>MATAGGPGRAHTVRDLAEEGKKRAVLLLVFAFGLAFLMSLTSSS VWINLPFATALIVLFRYISLDYDFRRKSTTTTDNDASRALTKTKSIEPNKIPSIQKDG KSDWKSKVNSPPVEAAIEQFTRHLVTEWVTDLWYSRVTPDKEGPEELINIVNNVLGEI SVRARNVNLIALLTRDLIDLICKNLELYHLCQAKIGKEKFVNLSTERRDAELKLTLIT ENKLHPALFSASAEHKILQSLADGLISVTAKPQDLQCYFFRCTARELLACAVMRPVVN LANPRFINERIELLALSHANKAERGVAESLEHATMVKQREPPMPTVDELAALIDPTSS GVELVRFSQDQSKAAPDTQLSNTRHPSNLKPNSSSTSLTNSSHPLESSILSSTTHGHS NSSMSLHSQSSGRTTAECYEGEWAQTMDISSQQKSQALAPEHLENMWTKGKNYKSENV KHVARVPSKSSSLGTSPVQQSAPYSTSVGHYPSAPQRQTTMSRSDDQHLIKHSTTAAY LNGTNHLRMALSRESADHASQEDFGVDSESSYATEEDENNNVTGLDSPVTRVWDSKSK GNATSSHIHHPLESPGFHKAKKNRSHIGKLKMTKTSGRKRSRSNSQKPPVWQEVERSS LLVGDDLNILNTSADDSRTDGLYDDTEVESMSRMFSGANASSLSLASTDSSYSSNYST TNVLEDSYLKLKCEVVGASIVKSGSGMFAVYSVSVTDANGNSWSIKRRFRHFEELHRR LKEYSQYNLHLPPKHFLSSGLEVPVVRERCKLLDIYLKKLLQIPTVSSCIEVWDFLSV DSQTYIFTDTLSVIQTLSVNLDERSKEKNTKSFNSSQALNGNLVSASQSLHVHKDDTM PKEKDKDFDAVDGLRSRKRNTEQNLGIGVGNTNANLHEDLSGSDPEQNEHSFIINSGN SKKTLSSETDYPPQSLESDGYSVAPNDWMAPNLSVPLFHLVDVVFQLQDGGWIRRQAF WVVKQILQLGMGDTFDDWLVEKIQLLRKGRIVAFAVKRVEQILWPDGIFLTKHPKRKA ATPPPGSQSNGMANYLTDEQRLEDAHRANFVHELMIEKAPSALVSLVGRKEYERCAQD VYFFLQSPVCLKQLAFEVLELLVLAAFPELDDIVKKWHEDKQQLYALE</aaseq> |
| Gene Sequence |
<dnaseqindica>7195..7323#6360..6442#5977..6136#5591..5726#5400..5479#4827..5200#4688..4733#4533..4601#3948..4092#3730..3830#2407..3652#2192..2331#1574..1751#1070..1475#174..291#gtccccgcaaaacagaaagtccccggaaaaggatcgcctcgccggccgccgttccctccccacaaacccaaaatcaacagccggccggccaccgccaccgccaccgccacctccccttcctcctcctctcccgcacccccgccgccggcagccgcgcggcggagctgccggcgatggcgacggcaggcggcccggggagggcgcacacggtccgcgacctcgcggaggaggggaagaagcgggccgtgctgctcctcgtcttcgccttcggcctcgccttcctcatgtcccgtgagttctcccaaaccctaagatagcgcttgtctgctggtagcttcgagctctccgataggtagggaggggacggtgatttttgtttgccgatgcatttgttcggtcaccagttccgtgattagggtttatgttggttgctcgttccgatgcatctgatttgaaccgtgtttctcgggtaatcatcctccctagatgcggtaacggcggtagtgatgtactactgatttttgtttcaccatcgtttctactcgctgttgttagggcgtttgttccagcggttgttgcgttgagctcttcattttctgttcattgttgtttttcgagtagagagattagtttgtcccacaggtgctgtaaattgctgcattgagcagttggtaaatttggggtacacttggtgtccgagcggatcatttttcgtgttatatgatgtgttacttcttagagacatcagaaattttgttgctgattgtccattctatgggttcatgcctgtggtggcatgttggtagttgtaaatttgtttaatgtataatgttgcatacaacactaattatatgttagactgcatgattgagtgtagagacaagcgagataagcactaagtatgtcagttcaattttggccttgtggctttgcctatgccagggatcataaagcatacctctgtggaagttgaaaaaaagtgctacatttcgaagaaaagctaagatccatgtttgtttaacccagtattctactgaactaatgtaatgactaattttgtccattgcagtgacaagctcctcagtttggattaacttgccatttgccacagctttgattgttttatttcgctacatatcacttgactatgatttccgtagaaagagcacaactaccacagataacgatgccagtcgcgcacttaccaaaacaaaaagtattgaaccaaataaaatcccctctattcaaaaggatggaaagtcagattggaagagcaaggtgaattcccctccagttgaagctgcaattgaacagttcacaaggcaccttgtcacagagtgggtaacagatctatggtactcccgtgtaacacctgacaaggaaggtccagaggaactcatcaatatagttaataatgtcctgggagagatatcagtccgggcaagaaacgttaaccttatcgctctgctaaccaggttgtgaaaagtctgatctgtcacatgaagtacatgaaacagtgcaaaatttaagaacaatggatgtcttacagtaaaatcttctctacctttttcagggatctgattgatcttatatgcaaaaatttggagctttatcatttatgccaagccaagattggaaaagagaagtttgttaatctctcgacggagcgtcgtgatgctgaactaaaactgacccttataaccgaaaacaagttgcatccagctttattttcagccagtgctgagcacaaggtaagaccgaatggatcatgaagcttccagtttcttgtagtaagttattgtgttttcagatctcaatgtgatcggaaatttgatggaccgctagggctggaattttgattatgtttcacaagtaccacggatgataacaatatgcaccataacactcctgcttcttcacatcgataatcgattatgattatttcttgaatttcatatatacctgtatattacccagctgcccatggtgttgaatctgcgcacggtataagctgagtgttgctaggttaatacatatttaaaaatccggtagattaatcatatgcattcctggtgatctcttgtgtaaactgtttgggaggtatgacatattaaattgtattcccattgtttatctgtttaagcatcaaagatcatatgataacatagtatatgtttatttttccttgcagatcctacaaagtcttgctgatgggttgatatcagtaacagcaaaacctcaggatctgcagtgttacttcttccgatgtactgcacgagaacttcttgcatgtgcagtcatgagacctgtcgtgaatttagcaaacccaaggtagtgagccactgctcctgctctacttgattctgtttttttctgttgtcatcattttgagatgtaaatttgcaggtttataaatgaaagaattgaattgttggctctttctcatgccaacaaggcagaaagaggagttgcagaatcattggagcatgctacaatggttaagcaaagggaacctcctatgccaactgttgatgaacttgctgcactaatagatcccacgagttcaggggttgaacttgtgcgatttagtcaggatcagtccaaagctgcaccagatacgcaactcagtaatactagacatccatctaacctcaaaccaaattcctctagtacttctttgaccaatagttcacatccacttgagtctagcattttatcttccactacccatggtcattcgaattccagtatgtcattgcattcccaaagtagtggcaggacaactgcagaatgttatgagggagaatgggcacagaccatggatatcagctcccagcaaaaaagtcaagccctagcacctgagcaccttgagaacatgtggactaaagggaagaattacaaatcagaaaatgtaaaacatgttgcgagagtaccttccaaatcttcttctctaggcacttctccagtgcagcagtcagctccttacagcacttctgttggtcattatcctagtgctccacaaaggcagacaactatgtctcgttctgatgaccaacatttgattaaacactcaactactgctgcatacttaaatggcaccaatcatctgaggatggctttatccagagaaagtgcagatcatgccagccaagaagactttggagtggacagtgagagttcatatgccactgaggaggatgagaataacaatgtgactgggcttgactctccagtaacgagagtttgggacagcaaaagtaaaggaaatgccacctcatcacatatacaccatccacttgaatctccaggtttccataaagcaaagaagaacagaagtcatattggcaagttgaaaatgacaaaaacttcaggaagaaaaaggtcaaggtcaaattctcaaaagcctcctgtctggcaagaggtggagagatcatctttattggtgggggatgatttaaatatactgaatacatcggcagatgattcaaggacggatggactgtatgatgatactgaggtggaaagtatgtcaaggatgtttagtggtgcgaatgcttcatctttgtcattggcatcaactgactcttcatattcatcaaattattccaccactaatgtgctagaagactcttatttgaagttgaaatgtgaggtattacattctccttttagttatcctggtcctgataactatagatggcacatatatttattcaatttcttattcaggtggtaggagctagcattgtgaaaagtggatctggcatgtttgctgtatattctgtttctgtgactgatgccaatggtaatagttggtccatcaagaggaggtgattatattctagttttgtattcacgtgagctgtaacagatattgcacctatgattattcaaacgtggtgatacttctttttaactggacttgcactattttttgaccttatcagatttcgccatttcgaagagctacatcggcgtttgaaagaatattctcagtacaatcttcacttgcctccaaagcacttcctttcgtcagggctagaggtccctgttgttcgagagagatgcaagttgcttgacatatatctaaaggtgtttttcttgtgctgtttgaagattccaagttcattttttcaatcgctccataccttataattcgaacttaagaccaactttcatgaggcctaaaacgatgcaaacatatcgcaagcagcagagagttttcttgctattttcttcggaggtataccagatagtgtgcttcttagaattcttcagacgtatgaatagacttgcaagcatgcatgtgcagctaattacatcttcatcgatgttagtttgttggcttgttatatatttagtaaacatctgtgagctttgttttctgttctcctgttgctatatggtaactttattttttttccatgttttgcttcaagtgtttcgttgtctgaacataatgcatgcttatgaaatttgaatgctcatttaaacaaaacacacttctaatcacatgattatttgttctacagaagcttcttcagattcccactgtttcaagctgtatagaggtctgggattttctaagtgttgattcacaggttagtgttttctttaatcttgttgcactcacccgttgaaactggtatattataattcaataacttgtcaaatgtcctcgctgcagacatacatcttcactgacactctctcagttatccagacgttgtcaggtgaataatccccttttagttgagtagctaatctattttttaaaccgtttgcgttttcatgctatttaatgcccattctgtgatatcacacagtcaatttagatgaaagatcaaaagagaagaatacaaaatcattcaattcttcccaagctttgaatgggaatttggtctctgctagccaatctttgcatgtacataaagatgataccatgccgaaggagaaggataaagactttgatgctgttgatggtttgagatcaaggaagaggaacacggaacagaatttaggaattggtgttggcaacacaaatgccaatcttcatgaagacctctctggaagtgaccctgaacagaacgagcattcatttataataaattcgggaaattctaaaaagacactgtcaagtgaaactgactacccgcctcaaagtttggagtctgatggatactcagtagctcctaatgatgtaagttatagtaattagttctactgccacattttgttatcgttcttgcatttgagcagtcttttgttcctccatttttgttcttttactttaattgtacgtggtgcaccagctgcctgccttataacttcaaaattaattgcacatggtgcaccagctaacctgcctgactaataacttcaaaactactataatgcagtggatggctccaaatcttagtgtgcccttatttcatttggttgatgtggtttttcagctccaagatggtggctggatcaggtacatcattataatttctaacttttagcgtatctaactttagtatttgcacttgtagaataaacccccaagtaaaatagttcctactgtcgttcttctttttatttttaggaggcaagcattttgggtagtgaagcaaatactgcaactgggaatgggagacacatttgatgactggcttgttgagaaaatccagttacttaggaaggggaggattgttgcttttgcagttaagcgggttgaacaagtaagtgtcaaatccttagcaatgcaggtgccaaggtgccagcagagtgaaagggaactgttttctttgatgcagctaaataaatcatattataagactttctagcattacccaaattcatatagatgttaatgaatctagacacacatatgtctagattcattaacatatatatgaatgtgggtaatgctagaaagtcttataagtctttggtctgaattgcataattttctaatttcactctgtgcagatactctggccagatggaattttcctgacaaaacatcctaagagaaaagcagcaacacctccacctggttcccagagtaacggcatggccaactatctgactgatgaacaacgactagaggatgctcatcgtgcaaattttgtccatgaactaatgataggtgaacttcatacgtaatattattctatgggtgatgctacaccactttattttgttaaaatatattgttttccctcttagtttgcttccgtagttgtagagatgtaatgattcccttctaataacagacttgttgcctgaatttgaatgcttcataactgcttttagtctttaaagtccgcatgttgttttaacactaccatcttactgttttatctgcacagagaaagcaccatctgcgttagtgagtctggttggtcgaaaggagtacgaaagatgtgctcaggacgtctacttctttcttcaggtaaatatgcccagaggattcaggtcatacctttttttttgcgaggaaaaaaagtagatcatactggatgcaaatttaccattttctgagcattctgcatgatattaccattagaactcacaactttcttcaaaagaaacactgaaatcattatttttttttaagcagctaaggtaggcagtcttaacatcacatgcctcatgttgggggtgttgtgagtttaaccatgtttttgtagaagttagggtactagtgtatctcacagaaattcatagagaccttcaataacaagctcaatcagcatctacctgtgtagagtagtaatgtttttgaaaagtaaatgtatatctaataatgtgacttgattaaacttctctgaaccaatttgggagtttgttgaagcaataatatttatacgaaactgggataccttttccacaaatgtatgtccttgtggcatgcacgtactcactttgacctaaactgcctaaaggtatgtagatttggccagagtatatggacaggttgattgtaaaagatgatttcgtgatattattataaatcataaagtttttgtaacatacgcatgggacacggctataaatattgatgtctctctctgtgtctctcttaaactaaaaaacatgtatttgtgaaaagaaaattcttaggaaacaaccttaaggtcaaatacagtagcatcagtaactatatgatccttgactgatgtttggagtttattttctgtacagtctccagtttgtttgaagcagctagcatttgaagtcctagagctccttgtactagctgcatttccagagttggatgacattgtgaagaagtggcatgaagacaaacagcagttgtacgccctggaataatttttcatggtgaacgaattattccgcagggtcagatcaaacacgtatgcttgatgcagagtgcagatccattccagtgtaaataagggaatcccgaaatcagtgctgttttgacatttctgtttaaatggaggcgacttcgtgcagtgtgaatatgattagttagcagtttgtgagaacggtcccttctcccccatggaccagtaggccgtttttttgttcgacagactggtctctctttttttttctcatagaatcatagagtttggtatacataatgcagcttgaaagaaagaggtcacacagtatttttttactgtaggtgtagggttgatgtactttttgttagcgtctgttttttgtcccctgtgggtgttaccaaattttgtaactccgcattacgttgaatgaaataaagaagtgatccaggaattcctc</dnaseqindica> 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| External Link(s) |
