Difference between revisions of "Os05g0588700"
(Created page with "{{JaponicaGene|
GeneName = Os05g0588700|
Description = Histone deacetylase interacting domain containing protein|
Version = NM_001063011.1 GI:115465752 GeneID:4339773|
Len...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os05g0588700| | GeneName = Os05g0588700| | ||
Revision as of 20:15, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os05g0588700 |
|---|---|
| Description |
Histone deacetylase interacting domain containing protein |
| Version |
NM_001063011.1 GI:115465752 GeneID:4339773 |
| Length |
7225 bp |
| Definition |
Oryza sativa Japonica Group Os05g0588700, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 5:29399229..29406453 |
| Sequence Coding Region |
29399522..29399594,29399671..29399771,29400041..29400193,29400309..29400447,29400554..29400624 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008398:29399229..29406453 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008398:29399229..29406453 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggattcttccgccggtgatcctggcgatggcgttccgtccaaaagggcgaggacggagagggatccctacagagtcgagacgatggaatttttggtacttgtcaagtcagagcttcctgacgacgtatacagccatttcgtccgatctatgatcaagataaggaggcagaggaacatgtcgattgaaaaatgcaaagaaattattctcgagatattggacggccaacctgaagccatacaggtcttcgagcacttcatccaaggatatagcccttgcagagcaaagatgcgtagcaaggcacacaatttcgttgagagagtgaaggcatgtcctgatatcagccgcgaagatttccatgctttgctgaacgttcttgctaaatattataagaacgaaatcaagaccagcgaagaagttctcgaaaaggttgagagaatcataggtaactatcccgagttcctagaagagttcaaaatttttgtgcctcaccacctaagggctcatctgccaaatgagaaatcttgcacaagtccaaagagtagtcgagtcagcgagacgtttgtgagttttactctagatgctatgaataaattggatggtctccgagtaaaagcaaccaatggaagaaaccaagcgactccattgaagtatactcaggaccaaaaccaaaaccatgaaggcagaggttatagtttgaggcataaacaaactaagagaaccactggcctgattgaaaatcctagaaagcaaggtgatgacaaatcacctcatgcagaagatgatgaggaacacaaggctgaacctttgcttcagtggagtacctcacgagaaaacgaattacccctaaaagtggatcctagtaattgcaagcattgcactcctagctattgcctgctaccaaagaattgtgtgactctccagtcaagctaccaaactgaacttggaaggtctattttaaatgattctttggtttctgttacatctggacgtgaggattgctacaagttcagaactaaaaatcaatatgaagaaaacatgtttaagtgtgaagatgacttgtttgagagtgacatgctattgcagaggtttagagcaactgctgactttattgaggatcttcaatatcggtttggcagcaatgtgaaaattcaagaacacctaactcctctacataagaggtgcattgaacagctatatgatgattctggcattgacatgcttgatgctttgtcagaatctgagaacaccagttctgctcttgctgttatactttctcgtctaaatcagaagataggagatttctccgaggcacgattatccttgaataaaatgtgcccagatactgttgccaataattactacagatcacttgatcattgtagtccctccttcaaacaactagacatggaaaggatgagcccaaaagctttgctggcagaagacaaacaaatcagtcggatcaaatctcatactgatattcacattcatgaggacgtaggcgttatcattaactatgcatatagtagaagttgttctactgaagataagccaatgatgaattggacaaagttagtaaaggcatttgtttctgtgaagtttcaatggccagacttgaaggatacagtttctcgcagaaacgtttgtgaacattgtgggatgagcagagattttctcaataatattcctgttgctgtgcttactaatgagtttgttttttcttcaaaggaagtggaaagtctaagagccaagtccaatgagtctacttcttcgcttgatcattttgacgcggaggttgaggagggtgagttcataccagatgtagaaaatatacagttgcgtgttcgatgtttgcctaccaataattctatgcatagtacctatggacattggagtggatctgaagagcataaatcatcaagagatgactccaacaatgaggttggaagttcagaatattttggaagaacatctaaagaatgtgatgcaaacagaggaatatcttgttgcactctggctgtgctctgccggcttctccaggttatgtacgagagactactagtagctaagaatctttcagaaggagcaagcacccatgattcatatgcacatttcaaggagaaactctgcagcctgattgatgggtctactgacaattggaactttgagcagcactgcttgaaatttcttgggcccaactcctacgtactatttactttggataagcttatcgatcgtgttatcaagcagatttgcaagatatatccaagccgtgaagacagctctgtccttcagcggcaagagaggtcaagaagaacatttaacattttgaaagacccagctttgccggcaagaagaacaaactcgtccaaagagctgttgcatcatcaaaatgcaagaggcacatcaattgagttgccgaagcaaggtcgtgaggaagcaaaaggaggttgtgagtcccatggtgacactggaaaaatgaaacagaaccattttcagagaaggaaaaaacgcgctttggagaacggtccaccgagtttttctcagcctggctcagggaatcaagctcataattga</cdnaseq> |
| Protein Sequence |
<aaseq>MDSSAGDPGDGVPSKRARTERDPYRVETMEFLVLVKSELPDDVY SHFVRSMIKIRRQRNMSIEKCKEIILEILDGQPEAIQVFEHFIQGYSPCRAKMRSKAH NFVERVKACPDISREDFHALLNVLAKYYKNEIKTSEEVLEKVERIIGNYPEFLEEFKI FVPHHLRAHLPNEKSCTSPKSSRVSETFVSFTLDAMNKLDGLRVKATNGRNQATPLKY TQDQNQNHEGRGYSLRHKQTKRTTGLIENPRKQGDDKSPHAEDDEEHKAEPLLQWSTS RENELPLKVDPSNCKHCTPSYCLLPKNCVTLQSSYQTELGRSILNDSLVSVTSGREDC YKFRTKNQYEENMFKCEDDLFESDMLLQRFRATADFIEDLQYRFGSNVKIQEHLTPLH KRCIEQLYDDSGIDMLDALSESENTSSALAVILSRLNQKIGDFSEARLSLNKMCPDTV ANNYYRSLDHCSPSFKQLDMERMSPKALLAEDKQISRIKSHTDIHIHEDVGVIINYAY SRSCSTEDKPMMNWTKLVKAFVSVKFQWPDLKDTVSRRNVCEHCGMSRDFLNNIPVAV LTNEFVFSSKEVESLRAKSNESTSSLDHFDAEVEEGEFIPDVENIQLRVRCLPTNNSM HSTYGHWSGSEEHKSSRDDSNNEVGSSEYFGRTSKECDANRGISCCTLAVLCRLLQVM YERLLVAKNLSEGASTHDSYAHFKEKLCSLIDGSTDNWNFEQHCLKFLGPNSYVLFTL DKLIDRVIKQICKIYPSREDSSVLQRQERSRRTFNILKDPALPARRTNSSKELLHHQN ARGTSIELPKQGREEAKGGCESHGDTGKMKQNHFQRRKKRALENGPPSFSQPGSGNQA HN</aaseq> |
| Gene Sequence |
<dnaseqindica>6860..6932#6683..6783#6261..6413#6007..6145#5830..5900#5216..5527#4646..4944#4278..4538#4078..4184#3810..3961#3579..3733#1408..1603#1081..1209#908..1009#660..813#407..579#tctttccctcggccgcgcggccgcgccgcgggggttctagaaggttccggaaggtgtggagtctcggtgccctcgtcgctcgcctccttcctccaggcgtccgccgccgccggcatacttgaggtcagtccctccactcgcgtgcgcgaatcaaggcgccgagatcacgagagtactcctcctaatcgcctcggtttcgtcagcccttacggcggattgatgacttggttgaatcgaattcctttttcggtttttttgcgaggggataaccggagcggcggtagattttggttgcctagacgaggccgtcactgtagattcgtctgttctcgtgcaggtctttgctgatttgttgcatctgtctgctcttgtgcaggtgttcgcctaaataattaggagaaatagaatggattcttccgccggtgatcctggcgatggcgttccgtccaaaagggcgaggacggagagggatccctacagagtcgagacgatggaatttttggtacttgtcaagtcagagcttcctgacgacgtatacagccatttcgtccgatctatgatcaagataaggaggcagaggtatcaatcactatatcctctcatctactcggctgtgagttttgatgactgatgataaagaatcctgatcctgaattcaggaacatgtcgattgaaaaatgcaaagaaattattctcgagatattggacggccaacctgaagccatacaggtcttcgagcacttcatccaaggatatagcccttgcagagcaaagatgcgtagcaaggcacacaatttcgttgagagagtgaaggtgcccaaagaaacccgctttgcttgctccctccttgtgtggtgtgggtgctcgtttggtaccaattgttgttaacttgaccttatacctgcaggcatgtcctgatatcagccgcgaagatttccatgctttgctgaacgttcttgctaaatattataagaacgaaatcaagaccagcgaagaagttctcgaaaaggtgttcattcttcaataatggcttgacaaaataattgcaaaggccctgatttcacaatgatttacttgcaggttgagagaatcataggtaactatcccgagttcctagaagagttcaaaatttttgtgcctcaccacctaagggctcatctgccaaatgagaaatcttgcacaagtccaaagagtagtcgagtcagcgaggtatacattacatgcttcgcataacatatgctaaggcctaactgctaatgatcattcctcgtatatcttataacatgttggtgaacaattattttataaataatttattgaactcagtatcactagctcactgctttcagtaaaattttctattctgagcgcatgtgccatcatcagtttatcaaatttcctttgcagacgtttgtgagttttactctagatgctatgaataaattggatggtctccgagtaaaagcaaccaatggaagaaaccaagcgactccattgaagtatactcaggaccaaaaccaaaaccatgaaggcagaggttatagtttgaggcataaacaaactaagagaaccactggcctgattgaaaatcctagaaagcaaggtgtgtgaaagttttctcttaatttgtttattctccaaatacaggcgagccctaggtgctttgctttaacatccttctcaggaaataatgaagttagacacaaataatgaaccctttcttaataacagtcatacatgcccaactgttttcctttttgctagagaatgcacaaatgatttgcgtatctttgcattcacctatttcatggtatcagatgttatttcgaagtatgccctagcaattgagagaaatttgataatttgacactttcttcgtcgccaatttgctttaattgactcttgtgagatgacatgtgtgaccatttgagggaatagaagtgtgccagggtgtcaaataatcgaagcccacatcgtggagtgtcactatcaaatttctcagcaattgagtgctacatttgctagagcttattttcatatatgaaaccagcatggtggcccgcgcagattacgcggctagcatcattgtattttctctcatataatagtataaatatattctcaatttattattaaaatgacaacataaatttaaattttgtactaaccaaactaccaatgtgtaacagtacattcatattgtattgtatatacgtgatagttattaattatttttaatatcaaattttagttatttctaaattgtattcccatatagactctagattcgtcttccaatattattccttattttttaattccgaattttcattatttgtaaattgtacttcctccatttcacaatgtaagtcattctagcatttccctcattcatattgatgttaatgaatctagacatatatatctatctagattcgttaatatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaaggagtatatatatagactctaggctcttcttccaatattatttatttttaattctgaattttattatttctaattgtatttctatgtggactctagactcatcttttaatattctttattttttaattttgaatttcagttgcttctaaattgtattcctatatggactctagactcttcttcccatattttttaattatgaattttagttttttgtaaattgtatttctatatggactttaaactctacttttaattttattattattattattccgaattttagttaattataaattcctatatggactctataatcttattctaatattctttattttttaattcttcatttcagttatttctaaattgtatttatttctaaattatatttctatatggactatatactcttctttcaatattcttttttaattccgacttttagttatttctaaattgtatatctatatggactctaacctaattttaatttacttttttttaattccgaatttttattagttctaaattgtataccggcatggactgtagtcttctcttccaatattctttattttttaattccgaatttcagctatctctaaattgtatttctatatggactttgtttttctttttctccgattaatatgataatttctaggccgtgagagcgaacgtggaggcaagttactagataataaattacaatttacagtctctaggaggaatgcaccttagaattttttaaatgaaaaggttaaaagttgaatatattggttcttaaaccctttcgtgcttcctaaattatcctaaaaagaaactatgaggaccgctattgtgaaccattcaattcaaatgttgtacagcatgatgttccgacttctgagtacaactgttttccaacagttaggtgtgttggtttttatattatctagtttctttctattgatgtgcacatgatacaatgtaacaacagacaaatgcagtatcattttgtgtggctagccacttgtttttgtattttgtatatatttaattgaaccccttgtgttgaagttatgtttaatcatttatgataggtgatgacaaatcacctcatgcagaagatgatgaggaacacaaggctgaacctttgcttcagtggagtacctcacgagaaaacgaattacccctaaaagtggatcctagtaattgcaagcattgcactcctagctattgcctgctaccaaagaatgtaaattcctacaaacgcacaagttttccatgtaaatcattggcatctgttctaacattctctttcttgatctcagtgtgtgactctccagtcaagctaccaaactgaacttggaaggtctattttaaatgattctttggtttctgttacatctggacgtgaggattgctacaagttcagaactaaaaatcaatatgaagaaaacatgtttaagtgtgaagatgacttgtaagtacacagatgttagtttttcagatgcttcagcactgttttcattctttcagctatcagcaaaaatttgcctggtcactgataatcaatgaatgttgtgtactactttttaggtttgagagtgacatgctattgcagaggtttagagcaactgctgactttattgaggatcttcaatatcggtttggcagcaatgtgaaaattcaagaacacctaactcgtaagtatactgtactatgtaaatttttcggagccaaaacttttcgagtggttagctgagtgttacattttttccttgtttttacatgtgcagctctacataagaggtgcattgaacagctatatgatgattctggcattgacatgcttgatgctttgtcagaatctgagaacaccagttctgctcttgctgttatactttctcgtctaaatcagaagataggagatttctccgaggcacgattatccttgaataaaatgtgcccagatactgttgccaataattactacagatcacttgatcattgtagtccctccttcaaacaactagacatggaaaggatgagcccaaaaggtacttttactattatgtactgctgaagctaggttctgcgttataattcatggaaattttaccattttattagttcgttcttactcatttcagtatctctcttgcagctttgctggcagaagacaaacaaatcagtcggatcaaatctcatactgatattcacattcatgaggacgtaggcgttatcattaactatgcatatagtagaagttgttctactgaagataagccaatgatgaattggacaaagttagtaaaggcatttgtttctgtgaagtttcaatggccagacttgaaggatacagtttctcgcagaaacgtttgtgaacattgtgggatgagcagagattttctcaataatattcctgttgctgtgcttactaatgagtttgttttttcttcaaaggtatatgtacttacaacactttactcttagaattatgatgatttcgtgttttggatttgcataaatagcttctgtcatgaaagttaattgatgaacacttactttctcatctttatcaagtaaaagtaacttgggtgtttgtacagttttccccttttccttaatatacatcggtcggcattcttcgccgtcccggcgaaaaaaaaaagtaacttgggtgacttgaaagataaatgtaagtaaagctacatgatttttattttccattcaggaagtggaaagtctaagagccaagtccaatgagtctacttcttcgcttgatcattttgacgcggaggttgaggagggtgagttcataccagatgtagaaaatatacagttgcgtgttcgatgtttgcctaccaataattctatgcatagtacctatggacattggagtggatctgaagagcataaatcatcaagagatgactccaacaatgaggttggaagttcagaatattttggaagaacatctaaagaatgtgatgcaaacagaggaatatcttgttgcactctggctgtgctctgccggcttctccaggtatttcagtatgttcctattacatatttttgtttggattggcgacttttaatatgccagtgagcactgagcaagacagcaagctacacagttcaacacaaatatgtatgctcttactttcaaaaaaatatttatgtatgctcttactttgttatacatgaaagagacggcttgctcaatatgcatcaccatgattgttaatctaatagacagcagtatgatatttcttctggacaaactattggcctctatacctaattattggcattatgatcttattttatttttaatttatgtggcaggttatgtacgagagactactagtagctaagaatctttcagaaggagcaagcacccatgattcatatgcacagtaacgtctaagattctcacctattatctataagtagaattattcaaatttcaccattgaatatctgtgttttaacaacaactttttattttattgaatggtgtagtttcaaggagaaactctgcagcctgattgatgggtctactgacaattggaactttgagcagcactgcttgaaatttcttgggcccaactcctacgtactatttactttggataagcttatcgatcgtgttatcaagcaggtaactgaattcctttgtgcaatggtaaattggaagtgcggtttagcttttcttggtaactttgttcattagttcgttccagacatttgtttaaaattcacttttcttctttcagatttgcaagatatatccaagccgtgaagacagctctgtccttcagcggcaagagaggtcaagaagaacatttaacattttgaaagacccagctttgccggcaagaagaacaaactcgtccaaagagctgttgcatcatcaaaatgcaagaggcgtaagtcttctactctaaaaactttacctactaccagcagcaagctactaagcacgcccactttcatctagttgttgagaacgtgtttagtcatgcatgcttagccatgagatgtgtcatgtgtgcaaatgtgaaatattggtgtcatgcatttcccctttttccacctcgcaaaagaaatacatttcctctgcgtttcactgaatttatcagatattcacaactgttgcatgtgtctttttttcccttgttgcgatattccaattcagacatcaattgagttgccgaagcaaggtcgtgaggaagcaaaaggaggttgtgagtcccatggtgacactggaaaaatgaaacagaaccattttcagagaaggtaaggatcctttgacagaatgattagaattccttattggttccagctatttcgacattatagatgtcttttacaggaaaaaacgcgctttggagaacggtccaccgagtttttctcagcctggctcagggaatcaagctcataattgaacatgtagttatatgcagccctgcagaaggctatagatttgcaaggatctttcaacacaaaatgtgcacggcacaacagctatttgaggatatctggagggaagcagaaattttcatggagaagcaggacacagcataaccagccctagggagaggttctgcctaggcagagagctctgcaacctcccgctctcctgtagtaactctctatcttctcaacctgggtagcggacttggccaaagccctgtaaattgatccttttgggctagttctccaaaccctgtaactttgt</dnaseqindica> 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| External Link(s) |
