Difference between revisions of "Os05g0592400"
(Created page with "{{JaponicaGene|
GeneName = Os05g0592400|
Description = UV-damaged DNA binding protein|
Version = NM_001063030.1 GI:115465790 GeneID:4339794|
Length = 8159 bp|
Definition ...") |
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| Line 1: | Line 1: | ||
| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os05g0592400| | GeneName = Os05g0592400| | ||
Revision as of 20:15, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os05g0592400 |
|---|---|
| Description |
UV-damaged DNA binding protein |
| Version |
NM_001063030.1 GI:115465790 GeneID:4339794 |
| Length |
8159 bp |
| Definition |
Oryza sativa Japonica Group Os05g0592400, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 5:29593472..29601630 |
| Sequence Coding Region |
29593587..29593690,29594021..29594069,29594168..29594227,29594318..29594409,29594922..29594973 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008398:29593472..29601630 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008398:29593472..29601630 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgagcgtgtggaactacgtcgtgacggcgcacaagcccaccagcgtcacccactcctgcgtcggcaacttcaccggccccaaccagctcaacctcatcgtcgcgaaatgcacccgtatcgagatccacttgcttactcctcaaggcctccagcctatgattgatgtacctatctatggaagaatcgccacactagagctcttccgccctcataatgagactcaggacttccttttcattgcgactgaaagatacaaattctgtgttctgcagtgggatggagaaaaatcggagcttctcactagagcgatgggagatgtttctgatcgcattggtcgccctacggacaatggacagattgggatcatcgaccctgactgtagacttattggtcttcacctctacgatggattatttaaggttataccgtttgataacaaagggcagctgaaggaagctttcaatatcaggcttgaagaacttcaagtattggacatcaagttcctgtatggctgtgttaaacctactatagttgtcctctaccaggataacaaagatgcaagacatgttaagacatatgaagttgcattgaaggacaaagactttgttgagggtccttggtcgcagaacaatttagacaatggtgctggtctgttaatacctgtaccagctcctcttggtggtgtcataattattggtgaggagacaatagtttactgcaatgccaactctacatttagagctataccaatcaaacagtcaatcataagagcttacggacgggttgacccagacggttcgcgctatttacttggtgataatgcaggcatattgcatttacttgtccttacccatgaacgagagagggtaaccggtctgaaaatcgagtacttgggagagacttcaattgcatcatcaatatcatatctcgataatggtgttgtctacgttggttctcgatttggtgattcacagcttgtaaaactaaatctccaagctgacccaaatggttcatatgttgaagttcttgagcgatatgtgaaccttggacccatcgtggacttctgtgtggttgaccttgacaggcagggtcagggtcaggttgtcacttgttcaggagcatttaaagatggttcccttcgggtggttcggaatgggataggtatcaatgagcaggcttcagtagaactacaagggatcaagggtttatggtcgttgaaatcttccttcaatgatccgtatgacatgtacctagttgtgagctttataagcgagacaagattcttggctatgaacatggaagatgagttagaagaaactgagatagaaggctttgatgcgcagactcagactttgttttgtcaaaatgccatcaatgatctgcttatacaggttactgctaattctgttcgtctggttagttgtacctctcgggagctagtggatcaatggaatgcaccagaaggattttcagtcaatgttgcatcagctaatgccagtcaggttctgctggcaacaggtggtggccatcttgtttacctcgaaattaaggattctaagctggttgaagtgaaacatatacagttagaacatgagatctcctgtgttgatttgaatccaattggggagaatccacagtatagctctctggctgctgttgggatgtggactgatataagtgttagaatactttcacttccagaccttgaattaatcaggaaggagaacttaggtggagaaattgttcctcggtctgttctgctttgtaccttggaaggggtttcatatttgctctgtgctcttggagatggtcatctgttcagttttctgttgaatgcaagtacgggtgaattaactgatagaaagaaggtttctcttggtacccaaccgataagccttcgtacattctcatcaaagggtacaacccacgtgtttgcttcatcggatagaccgactgttatttatagcagcaacaagaagttgctgtatagcaatgtcaatttgaaggaagtcaaccatatgtgtccttttaatacagctgctattcctgacagccttgcaattgctaaagaaggtgaactctcaattggaaccatcgatgacatccagaagcttcatatccgtacaatccccttgaatgaacaagcacgtcgcatttgccatcaggaacagtccaggacactagcgttctgcagcttcaagcacaaccagactagtatagaggaaagcgagacacattttgttcgtcttttggatcatcaaacttttgagttcctgtcaatttatcagcttgatcaatatgagcatggctgctccatcattagctgctcattctcagatgataataatgtttattattgtgtgggaacagcatatgttttaccagaggaaaatgaaccatcaaagggccggatccttgtatttgcagttgaagatggcagactgcaattaattgtagagaaagaaactaaaggagctgtctattcgctgaatgcattcaacggaaaattgttggcagctatcaaccagaagattcaactatataagtggatgctacgggaggacggttcacatgagctgcagtctgagtgtgggcatcatgggcacatattggctttgtacactcagactcgtggcgatttcattgtagttggagacttgatgaaatcaatatccttgctcgtgtacaagcacgaggaaagtgcgattgaagagcttgctagggattacaatgcaaactggatgagtgcagttgagatgcttgatgacgagatctatattggagcagagaataactacaacattttcactgtgcggaagaacagtgatgcagcgacagatgaagagaggggcaggctggaggttgttggagagtaccatcttggagagtttgtgaatagactccggcatggttcgctggtaatgcggcttccggactcagagatgggccagatcccgacggttatctttggcaccatcaacggggttattgggattattgcttcgcttccacatgagcagtatgtatttcttgagaagctccagtcgactctggtgaagttcataaagggcgtggggaacctgagccatgagcaatggcggtcgttccacaacgacaagaagacgtcggaggcccgcaatttcctggatggtgacctgatcgagtcattccttgatctaagcagaaacaagatggaggaggtggccaagggtatgggggtccccgttgaggagctatccaagagggtggaggagctgactagattgcactag</cdnaseq> |
| Protein Sequence |
<aaseq>MSVWNYVVTAHKPTSVTHSCVGNFTGPNQLNLIVAKCTRIEIHL LTPQGLQPMIDVPIYGRIATLELFRPHNETQDFLFIATERYKFCVLQWDGEKSELLTR AMGDVSDRIGRPTDNGQIGIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEE LQVLDIKFLYGCVKPTIVVLYQDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGAGL LIPVPAPLGGVIIIGEETIVYCNANSTFRAIPIKQSIIRAYGRVDPDGSRYLLGDNAG ILHLLVLTHERERVTGLKIEYLGETSIASSISYLDNGVVYVGSRFGDSQLVKLNLQAD PNGSYVEVLERYVNLGPIVDFCVVDLDRQGQGQVVTCSGAFKDGSLRVVRNGIGINEQ ASVELQGIKGLWSLKSSFNDPYDMYLVVSFISETRFLAMNMEDELEETEIEGFDAQTQ TLFCQNAINDLLIQVTANSVRLVSCTSRELVDQWNAPEGFSVNVASANASQVLLATGG GHLVYLEIKDSKLVEVKHIQLEHEISCVDLNPIGENPQYSSLAAVGMWTDISVRILSL PDLELIRKENLGGEIVPRSVLLCTLEGVSYLLCALGDGHLFSFLLNASTGELTDRKKV SLGTQPISLRTFSSKGTTHVFASSDRPTVIYSSNKKLLYSNVNLKEVNHMCPFNTAAI PDSLAIAKEGELSIGTIDDIQKLHIRTIPLNEQARRICHQEQSRTLAFCSFKHNQTSI EESETHFVRLLDHQTFEFLSIYQLDQYEHGCSIISCSFSDDNNVYYCVGTAYVLPEEN EPSKGRILVFAVEDGRLQLIVEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLREDG SHELQSECGHHGHILALYTQTRGDFIVVGDLMKSISLLVYKHEESAIEELARDYNANW MSAVEMLDDEIYIGAENNYNIFTVRKNSDAATDEERGRLEVVGEYHLGEFVNRLRHGS LVMRLPDSEMGQIPTVIFGTINGVIGIIASLPHEQYVFLEKLQSTLVKFIKGVGNLSH EQWRSFHNDKKTSEARNFLDGDLIESFLDLSRNKMEEVAKGMGVPVEELSKRVEELTR LH</aaseq> |
| Gene Sequence |
<dnaseqindica>116..219#550..598#697..756#847..938#1451..1502#1643..1705#1816..1865#2375..2450#2878..3090#3197..3303#3400..3508#3923..4123#4207..4422#4721..4831#5189..5464#5542..5816#6248..6599#6805..7089#7176..7757#gcgctctagactgtgcaggagagaccaccccctccctccttctagaagactagaaccctcgccatcctccccttcccccaccctagcgtcggcggcggcggcggtggcggcggagatgagcgtgtggaactacgtcgtgacggcgcacaagcccaccagcgtcacccactcctgcgtcggcaacttcaccggccccaaccagctcaacctcatcgtcgcgtccgtaatctattccccccttcctcccccctctcgccctccaaatctagggttttgctgcgtcactcccactcccgcctccccctcggggtcgggatcgttctagggttacaacgctgctcgctcttttttcctctgccacctccacgcccttcgtttaaatcactgtgggatgacacattatttgacgggcccttgttttctttcttttgttaaaactcactgtctttcatctctttctatatgttcttcaacttagattccctgcttgttggctctctgcatattcattcctttactaactctgcgcatgtgctgcaaatcttccaggaaatgcacccgtatcgagatccacttgcttactcctcaaggcctccaggtctgtggttcatgatatttattattatctactacttgcaaatgattatgtcatgtgctgctctaataacatcataacctcttcccttttgtaagcagcctatgattgatgtacctatctatggaagaatcgccacactagagctcttccgccctcatgtcagccaatttactgttcctcgacttgccattctgttgttgccgtgcactggatggtaaaactaacactatttatcttacgcctttcagaatgagactcaggacttccttttcattgcgactgaaagatacaaattctgtgttctgcagtgggatggagaaaaatcggagcttctcactaggtttggtcacttgcactattctctttagcttacaaagcaatgagactgcttttataaccttttatagacataacattggcttgtcaaatggttcaaattgaatgtactgtaaaattatggatcactagtcccacacaatgctatccagtcgttgtctagctgattccgtgtagcatggaaggtcctcatggccaccagctgctccttgataaaggaagattgagacttcaagagttaatccttgccaagccaatgttatgtctacggagtcactgctctctgtgtctattgagcctctacgctgatgagagggtcaacagagtgcagatgggggagggagatgcaatgacagctaattttgagagtgcgaaagatatccagagtaaaacgcctcaataaccatggtctcacagtctgtttatagaagaaaataatattgctactctctgataaatttcaataactattagtcttttaactgataaatgataagtactatttgcaatatgtagagcgatgggagatgtttctgatcgcattggtcgccctacggacaatggacaggtgtgtggtatttccgaattgaaactccaatgttggcttgtaaaaattgtgaaactaccccttctatgtagatctatatgcaatatatataggaatgcattcttttgccctcttatatttggccaattactataatgtagattgggatcatcgaccctgactgtagacttattggtcttcacctctacgatggattatttaaggtaagtgtgcaccttcttttttaaaaaataaaataaaatgggatttgtccttgatagcatgctttttttacatctccactgagagaagcttttacacccttgccatccaggttataccgtttgataacaaagggcagctgaaggaagctttcaatatcaggtatcaggatggcaaaacgtataatcgaacatattggttgatggaaacatctgtgtagtgacttagtcaggaaaaacatgtgccactagtaatcggcaactaaattgttggagcattttgtgcgcttaatgtgggagggtctttcctatcgtttctctagtttgcttttgttggtgacattcagacaaccaaaatgtacataaagtgaagcaagctctttttttgctttctttgtttttgtatctgtgttgcctgatctgcttagaaaaaggaaaaccaaatgattggtgaaaatttattactatagtttacatctttgctggctaacacaaaacctaacatttctcctggtagactgaaagctgtgttgtggttggaatgtatttttatgctttacatcttctgttaaatataacattaccattcgggggttaatatttcattaaggatgatgcatattcgtacatttgaccttaccagagagtaacacttgcattttctttcttcaggcttgaagaacttcaagtattggacatcaagttcctgtatggctgtgttaaacctactatagttgtcctctaccaggtttgctcaaacttcactatattttttgtaccctgcaattgaagtctgaatccaatgggatagttttgaactacaacaattgccatggtgccttttctttgtatgtattgttatactattatttttttagtgtacagttgtattaatcaatctacatttcactggactttggatttgctattgtgctcaagtggtgcaaagattacttgctgttacacacctataatccactgtgtttattttgacttaagtgtaggcattttacataataggttactgttggttttcacaggattgagaattgagattggtagaatgctgttctttatttacttttgatttattcaaaatatctgctggttctcagatctttatttgaccattgtgagatagtaaaagatctgatttaatttgcatgctttaccaggataacaaagatgcaagacatgttaagacatatgaagttgcattgaaggacaaagactttgttgagggtccttggtcgcagaacaatttagacaatggtgctggtctgttaatacctgtaccagctcctcttggtggtgtcataattattggtgaggagacaatagtttactgcaatgccaactctacatttagagctataccaatcaaacaggtaatatattgttctctttatggttcttagatttgtggtgcctactgtgtgtgcaggtatgttggcactccataactaattgtttttgtcttccattcttgtacagtcaatcataagagcttacggacgggttgacccagacggttcgcgctatttacttggtgataatgcaggcatattgcatttacttgtccttacccatgaacgagagaggtaccagctatgcactgttttgaaactaaaagactcttgatccatttctcagtactcacaaatattcccttttgatgtactggttacttttttaagggtaaccggtctgaaaatcgagtacttgggagagacttcaattgcatcatcaatatcatatctcgataatggtgttgtctacgttggttctcgatttggtgattcacaggtgagttaatagcagtttgaatttgaactacaatgtactccctccatccacaaatgttacacatattacttttgacaccaagaccaaggagaaattaaatcatcttggatgttacaaaatcaaggagtgaatgcaagcatgcaaccaatggctatttagatgactccttgggttctaataaaacatttaatttatctcttcatttaagtcttgaatacataaagactacaaataggaataacttatttggaaaaattcaaatgtgaaataggtgtaacttttgtggatggagggagtaatgtccctttttgggggtggtggtcatgccctaatttcaatgcatgcgtgtgctttatgcagaaaaagtaaatttcaattcgttctgtatgttgacacaaatattgttgttgacagcttgtaaaactaaatctccaagctgacccaaatggttcatatgttgaagttcttgagcgatatgtgaaccttggacccatcgtggacttctgtgtggttgaccttgacaggcagggtcagggtcaggttgtcacttgttcaggagcatttaaagatggttcccttcgggtggttcggaatgggataggtatcaatgagcaggtattgaattaagatctatccaatattgtccaattttagttctgcataaagttgagctatattatctcttatcatgtaattaggcttcagtagaactacaagggatcaagggtttatggtcgttgaaatcttccttcaatgatccgtatgacatgtacctagttgtgagctttataagcgagacaagattcttggctatgaacatggaagatgagttagaagaaactgagatagaaggctttgatgcgcagactcagactttgttttgtcaaaatgccatcaatgatctgcttatacaggtgccttttttaatcactgcttcgttcatttttgttgcatttcttgtaagtaatacatccatgaatttgtggggtatggaatttgaaggaaccctatttgaaatgcctgaatgaatcctaattaactaaaataattattttgaaatgattttgttgatatttgagaggcaaaaagttgtctcggtaagttgtatgttctgtgtttttatacattcactgatttaggtggtttcaccactgttgtgaactgttttaataaatacttaaaaagggtgtgattttttactttcaatgacaggttactgctaattctgttcgtctggttagttgtacctctcgggagctagtggatcaatggaatgcaccagaaggattttcagtcaatgttgcatcagctaatgccagtcaggtaggtttcctgggaccccttttttctctgggtaagtttcatctcgtcaaaatgcacctagaagttacaggcaggagtcataagccagacatgaatgtgaaacttattgaaagatctttcgtgcatttgtgcacatgctaccccactttaagaataaacagtccactttcgatggacttaaactctgaatccaatggctgaaccaccatttgtgtgctaaaagtatgcactagggggcacatataagcaggaactgttaaaactgccaatatattctggttggtaatcctaaattttggtgaatttgacttcttagcttttcatcacagttttttaaagacattatgtgtgttgcaggttctgctggcaacaggtggtggccatcttgtttacctcgaaattaaggattctaagctggttgaagtgaaacatatacagttagaacatgagatctcctgtgttgatttgaatccaattggggagaatccacagtatagctctctggctgctgttgggatgtggactgatataagtgttagaatactttcacttccagaccttgaattaatcaggaaggagaacttaggtggagaaattgttcctcggtctgttctgctttgtaccttggaaggggtatgttcttgacctcacttctcttttaaaaaaacaggtagctacttctattgacatatgctttctattcatttcaggtttcatatttgctctgtgctcttggagatggtcatctgttcagttttctgttgaatgcaagtacgggtgaattaactgatagaaagaaggtttctcttggtacccaaccgataagccttcgtacattctcatcaaagggtacaacccacgtgtttgcttcatcggatagaccgactgttatttatagcagcaacaagaagttgctgtatagcaatgtcaatttgaaggaagtcaaccatatgtgtccttttaatacagctgctattcctgacaggtctcttcatctctgatatgcatcagttctttgtgcatcttcttgattttacactgatatgaattatgtacagagtgttttatatctttggacaaatgttttcatttttgaactcataacttattaccgtttatttatttgatatccatcgcaacttgtgaaccccctttttttctgatatgattcatgttttgttccaactttttagcaagcaacttccttttgttcttaaatcacaggaagtagtgttatcatcactaatcaatcaagacagcagattgatttcttgcacagcatattcatatgataaaaaatgcttttgtaacctgctagttatgctctggaaccttctccatctcattagtagagcatttatttcgaaatgacgattatactatttttgtagcagtaaattgaactttatcttgcagccttgcaattgctaaagaaggtgaactctcaattggaaccatcgatgacatccagaagcttcatatccgtacaatccccttgaatgaacaagcacgtcgcatttgccatcaggaacagtccaggacactagcgttctgcagcttcaagcacaaccagactagtatagaggaaagcgagacacattttgttcgtcttttggatcatcaaacttttgagttcctgtcaatttatcagcttgatcaatatgagcatggctgctccatcattagctgctcattctcagatgataataatgtttattattgtgtgggaacagcatatgttttaccagaggaaaatgaaccatcaaaggtaatatgtttggtagcttgatgttttcttacaggtgttcgatctcattaatagtattttcaaataaaaaaagttgtatttttgtttgaaaaataggaagttcaagatagaatttgggtactataactataagtggggtgattaccgctaacactattggtttctcctgcatataaatacttactgtcaatgcctcatggtgtagggccggatccttgtatttgcagttgaagatggcagactgcaattaattgtagagaaagaaactaaaggagctgtctattcgctgaatgcattcaacggaaaattgttggcagctatcaaccagaagattcaactatataagtggatgctacgggaggacggttcacatgagctgcagtctgagtgtgggcatcatgggcacatattggctttgtacactcagactcgtggcgatttcattgtagttggagacttgatgaaatcaatatccttgctcgtgtacaaggtatgattgtttaattgtttacagtgcaacgtatgatgctatattcctaacttccacagctaacattttttttcctgtttgagcagcacgaggaaagtgcgattgaagagcttgctagggattacaatgcaaactggatgagtgcagttgagatgcttgatgacgagatctatattggagcagagaataactacaacattttcactgtgcggaagaacagtgatgcagcgacagatgaagagaggggcaggctggaggttgttggagagtaccatcttggagagtttgtgaatagactccggcatggttcgctggtaatgcggcttccggactcagagatgggccagatcccgacggttatctttggcaccatcaacggggttattgggattattgcttcgcttccacatgagcagtatgtatttcttgagaagctccagtcgactctggtgaagttcataaagggcgtggggaacctgagccatgagcaatggcggtcgttccacaacgacaagaagacgtcggaggcccgcaatttcctggatggtgacctgatcgagtcattccttgatctaagcagaaacaagatggaggaggtggccaagggtatgggggtccccgttgaggagctatccaagagggtggaggagctgactagattgcactaggtctcgataatgatgatataattaatacgtagaagatgtttgctggaacttatttctgaaatgtatatttttttttctactccagtttattaagcatgtgttggtgggttgaatgttgatgccgctggtggcacaggaagaagcattcctgttaagaagagttactaagttacccatgtggttcggttgtagattttactctgttttgttggttggatggtccagtaattaacgtttgagctgccagttttaagatgtactcctagtagtattagaaattgttttcctctgttggttgtgattgttgtggtgggcacgctgtttgaacactttgtacaaggagttgtaaagcaggtccctcggcttgattcttgatgagtatagtagtattttgattggttg</dnaseqindica> 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| External Link(s) |
