Difference between revisions of "Os06g0247800"

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(Created page with "{{JaponicaGene| GeneName = Os06g0247800| Description = Similar to Dynamin-like protein (Fragment)| Version = NM_001063820.1 GI:115467371 GeneID:4340644| Length = 8260 bp| ...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os06g0247800|
 
GeneName = Os06g0247800|

Revision as of 20:20, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os06g0247800

Description

Similar to Dynamin-like protein (Fragment)

Version

NM_001063820.1 GI:115467371 GeneID:4340644

Length

8260 bp

Definition

Oryza sativa Japonica Group Os06g0247800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:7660736..7668995

Sequence Coding Region

7660948..7661088,7661201..7661251,7661360..7661480,7661590..7661694,7662147..7662208
,7662582..7662699,7662780..7663116,7663573..7663720,7663816..7663917
,7664008..7664127,7664620..7664703,7664806..7664933,7665535..7665619
,7665750..7665897,7666155..7666231,7666371..7666427,7666607..7666745
,7666826..7666980,7667187..7667300,7667392..7667459,7668014..7668180
,7668429..7668637

Expression

GEO Profiles:Os06g0247800

Genome Context

<gbrowseImage1> name=NC_008399:7660736..7668995 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:7660736..7668995 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggccgtcgaggagctcgcgcagctgtcggaggcgatgcgccaggcggcgtcgctgctggccgacgacgacccctccgacgactccgccccacgccgcccctccaccttcctcaacgccgtcgcgctcggcaacgtcggggcgggcaagtcggccgtgctgaacagcctcatcggccaccccgtgctgccgacgggggagaacggggcgacgagggcgccaattgtggtggacctgcagagggacccgggcctcagcagcaagtccatcgtgctgcaaatcgacagcaagtcgcagcaggtgtccgcaagttcgctgcggcattcgctgcaggacaggctcagcaagggggcgtccagcggatccagtaggggccgtgtagaggggatcaatctcaagctgcggacgagtacagctcccccactaaagctggttgatttacctgggatagaccagcgagctgttgacgattcaatgattaatgaatatgctgggcacaatgatgcaatactgctagttgtgatacctgcaatgcaagcagctgatgttgcgtcatctcgagctcttaggctggccaaggatattgatgcagatggcaccagaactgtaggtgtgataagtaaagttgatcaagcagaaggagatgcaaaaactatagcttgtgttcaggcccttctgtcgaataagggcccaaaaaaccttccagatatcgagtgggttgctctgataggacaatcagttgcaattgcgtcagctcaagcagcaggttctgaaaactcactagaaacagcatggaatgctgaagctgaaaccctcagatccatcttaactggagctccaaaaagtaaactaggtagaatagctctggttgacaccattgctaagcagatacgtaaacggatgaaagtgcgacttcctaacctattgagtggtcttcagggtaagtcccagatggttcaagatgaactggcacggctgggagaatctatggtacaaagtgctgaagggactcgggctgttgctttggaactctgccgggaattcgaggataagtttcttgctcatattacatctggcgaggggtctggttggaaagttgttgcaagttttgaagggaaattcccagagagaattaaacagctgccactggacaggcactttgacctcagcaatgttaaaaggattgtcttggaagccgatggttatcaaccgtacctgatatctccagagaaagggttgaggtccttgataaagatagtattggatatggcaaaggagccatcacgactctgtgttgaagaggtacatcgtgtattgttagacattgtcaatgcttcagcaaatgccacaccaggacttggaagatatcctccattcaagcgcgaggtcattgcaatagcatcaaatgcactagacagcttcaaaaatgatgcaaaaaagatggttgttgcacttgttgatatggagcgcgcctttgttcctcctcagcatttcatccgtctagtgcaaagaagaatggaaaggcaacgccgtgaggatgaattaaaaaatcgatcctccaagaaaccacaggatgctgaccaacccatgggaaaaagggcctccagtccccagacaggatctgagaaagacacaaaagacaaatcagcgaaagacaaagacaaagacaaatcaggccagcaagacaaagacgcaaaagaggggtcctctgtgcaggttgctggttcttctggtgaaattactgcaggttaccttttgaagaaaagtgcaaaaacaaatggatggagtaggaggtggtttgtcctcaatgagaaaagcggaaagcttggctacacgaagaaacaagaggagagacattttcgtggtgtcatcactcttgaggagtgtaaccttgaagaagtagaggaggaagaacctcctaaaagtttgaaggattcaaaaaaggcaaatgggccagagaaaggcccaagtctcgtctttaagataactaacagggttgcctacaaaacagttctaaaagctcatagtgctgttgtattgaaagctgagagcacggccgacaaagttgagtgggtaaataagatacgggctgtaattcaaagcaaagggggatcattcaagggtccaaatactgatggtggttccatgagacaaagcaattccgatggtgctctggatactatggcacggagacctgctgatcctgaagaagaacttagatggatgtcccatgaagttcgtggttatgttgaggctgttttgaatagtctggcagcaaatgtcccaaaggctattgtgttgtgccaagtggagaaggcaaaggaagatatgctaaaccagctatatagttcaataagtgggcaaagcaatgcaaaaattgaagagcttctgcaagaggaccataatgctaaacgtagaagggaaaaataccaaaaacaatcatctctcttgtcaaagcttacccgtcaacttagtgtccatgacaacagggctgcttcttatgccaatgatatctctgaagctgagagcccccggacacccaaccgcccaggtgaggattggaggtctgccttcgattccgcatccaacggacccagctcaggcagcgaatcaaggtcaagaagcgctgatggacgcagagggcgctatgaaaacggcgacgtgacctccggtgccaactccggcagccgacgcactccaaaccggttacctccagcacctcctaaatactaa</cdnaseq>

Protein Sequence

<aaseq>MEAVEELAQLSEAMRQAASLLADDDPSDDSAPRRPSTFLNAVAL GNVGAGKSAVLNSLIGHPVLPTGENGATRAPIVVDLQRDPGLSSKSIVLQIDSKSQQV SASSLRHSLQDRLSKGASSGSSRGRVEGINLKLRTSTAPPLKLVDLPGIDQRAVDDSM INEYAGHNDAILLVVIPAMQAADVASSRALRLAKDIDADGTRTVGVISKVDQAEGDAK TIACVQALLSNKGPKNLPDIEWVALIGQSVAIASAQAAGSENSLETAWNAEAETLRSI LTGAPKSKLGRIALVDTIAKQIRKRMKVRLPNLLSGLQGKSQMVQDELARLGESMVQS AEGTRAVALELCREFEDKFLAHITSGEGSGWKVVASFEGKFPERIKQLPLDRHFDLSN VKRIVLEADGYQPYLISPEKGLRSLIKIVLDMAKEPSRLCVEEVHRVLLDIVNASANA TPGLGRYPPFKREVIAIASNALDSFKNDAKKMVVALVDMERAFVPPQHFIRLVQRRME RQRREDELKNRSSKKPQDADQPMGKRASSPQTGSEKDTKDKSAKDKDKDKSGQQDKDA KEGSSVQVAGSSGEITAGYLLKKSAKTNGWSRRWFVLNEKSGKLGYTKKQEERHFRGV ITLEECNLEEVEEEEPPKSLKDSKKANGPEKGPSLVFKITNRVAYKTVLKAHSAVVLK AESTADKVEWVNKIRAVIQSKGGSFKGPNTDGGSMRQSNSDGALDTMARRPADPEEEL RWMSHEVRGYVEAVLNSLAANVPKAIVLCQVEKAKEDMLNQLYSSISGQSNAKIEELL QEDHNAKRRREKYQKQSSLLSKLTRQLSVHDNRAASYANDISEAESPRTPNRPGEDWR SAFDSASNGPSSGSESRSRSADGRRGRYENGDVTSGANSGSRRTPNRLPPAPPKY</aaseq>

Gene Sequence

<dnaseqindica>213..353#466..516#625..745#855..959#1412..1473#1847..1964#2045..2381#2838..2985#3081..3182#3273..3392#3885..3968#4071..4198#4800..4884#5015..5162#5420..5496#5636..5692#5872..6010#6091..6245#6452..6565#6657..6724#7279..7445#7694..7902#gttctcgtctcgcccaaatccaccgcccccacgtctctcgtgcctcctcccccatcccatccccacgcagatttcaaacccgcgtcgcctcggccctggtcgccgccgccgccgccgccgtcgcagcagcagcagcagcgggagcccccgatccgtcgagatccggcgcggggagagggagagggagaggaagggcggggacgcgggagacgatggaggccgtcgaggagctcgcgcagctgtcggaggcgatgcgccaggcggcgtcgctgctggccgacgacgacccctccgacgactccgccccacgccgcccctccaccttcctcaacgccgtcgcgctcggcaacgtcgtaagtataataggccgccgccgccgttggagccgccgcgatccgcccgcccgctcgctcgctcgctcgtgcgctcccccgatctgatccagttctgatctgcttcgtgcagggggcgggcaagtcggccgtgctgaacagcctcatcggccaccccgtgctggtgagctcgtgctactactactactactactacccgacaactagctcttcgcctatttccattttttgattcttagatttgggggtggtggtggtgcttggggtgcagccgacgggggagaacggggcgacgagggcgccaattgtggtggacctgcagagggacccgggcctcagcagcaagtccatcgtgctgcaaatcgacagcaagtcgcagcaggtgtccgcaagtcagtgggatctcgcaaactttgcgttgctcgattctgtggatgtacttgcgcccgtgggttttcgagatggatatggcgctgaatttgtgatgtctgctgttctcaggttcgctgcggcattcgctgcaggacaggctcagcaagggggcgtccagcggatccagtaggggccgtgtagaggggatcaatctcaagctgcggacgagtacaggttcgtccgcgagtaacatggcgattctggctaacccgttcctgcctcttgttccattagaaatgtagataatatagtgtagaatgatatgtatgatatactgccatgttaggacttggtgaggtattccttgtagtcatggcgcacagatcaaagagataaaatttgggttgttatattgaagttcattgcattttatatgctgtttgtattttgtgctgaagaaagttataaagaatcttcatgttaaaaagaaagttacagagaatcttgtgatgtgtaattgcaaagtagaagtgatccaactttgtttacaacttaatatttcaatgctaactgttgatgagtttatgcttatttttctgtacaaatatgttcttatttcatgtctttctgttgtgcttccctctataaatgtctcacagtacctggcccttcttttttattttcagctcccccactaaagctggttgatttacctgggatagaccagcgagctgttgacgattcaatggtaggttattaaattgtgttggttttcctcattacttgcccattagtacttcttgtatggtaggtgatcaaaaaaataatttaaccactcactattactgtcagtttacatgctatgtgagtataacggtagaaggaataactttttttacggggaggtaacatgaatatcttgtatgatccgtgacattcatatatctgaaaaatggtagcatctaggaaacttcacaatgtgcagttacttcatagattgaattttcccttgaagcgttcatactcatctactatagagagaacaccacatgcattcttctttgatgttttcatgctttccaattttatgctgcagaattctgactgttttctgaattcagattaatgaatatgctgggcacaatgatgcaatactgctagttgtgatacctgcaatgcaagcagctgatgttgcgtcatctcgagctcttaggctggccaaggatattgatgcagatggtctgtctttcaggagtaaatatcttctatagtaccattcattcatttcatcgcaagtgatatttacccatttgttgcaggcaccagaactgtaggtgtgataagtaaagttgatcaagcagaaggagatgcaaaaactatagcttgtgttcaggcccttctgtcgaataagggcccaaaaaaccttccagatatcgagtgggttgctctgataggacaatcagttgcaattgcgtcagctcaagcagcaggttctgaaaactcactagaaacagcatggaatgctgaagctgaaaccctcagatccatcttaactggagctccaaaaagtaaactaggtagaatagctctggttgacaccattgctaagcagatacgtaaacggatgaaagtgcgacttcctaacctattgagtgggtaagaattgtgctttatgcttcaattactgttgtatattgtacctagcatctcttaattatttatcgatgctgcatggtgttagatgaattcatgttcttgctacagtgctgttactcatttcgttgatataatatagcatataattcgaattggttccctcgtacatactgcatgtcatttagtgagtgtttgccgaccatttcccgccctccctctacctctctcgtacgcatttagtttctaccacttttccaccgacacaaagtattctcacacacagaacaatcatgaaagtgtacaattcatttgctcttacatctttcttaatttcatcacctttttaatccttgtgcaaaatctaacatgccttctgttaatggagggaataattcactactatgtgtggtctagtgctaaacttacatacaattgcttcatatgctgctacttcagtcttcagggtaagtcccagatggttcaagatgaactggcacggctgggagaatctatggtacaaagtgctgaagggactcgggctgttgctttggaactctgccgggaattcgaggataagtttcttgctcatattacatctggcgaggttagtaaagagcttcaaacctacttagattttaatcataccttcctaaactgcacaagcaattacaataacaatatactgtcttgtataaataggggtctggttggaaagttgttgcaagttttgaagggaaattcccagagagaattaaacagctgccactggacaggcactttgacctcagcaatgttaaaagggtaagattggatccagtttcaggattagtgctactatcaggcattttcccatcttttatgaacactgaacagtattctctgacattctagattgtcttggaagccgatggttatcaaccgtacctgatatctccagagaaagggttgaggtccttgataaagatagtattggatatggcaaaggagccatcacgactctgtgttgaagaggtatgttctactttattcaaataaagtcttgttaccaataaaaatataacatgtttagatctgttcctttttttcctctcaaggctaagaacgttgtagaaataatgtgtttgtgtttgtaagttactgcaataagaaaatgatgctttttattctctaccagaaaagcgttatcctaaatttgacttttggaggctgggttgggtgcatttgattgaggtagcaatttgttctatggattgagttttttagataagaggtaaaattagggttccattgtttcaacaaataagatacggatgcatgggactacctatctgcttgagttccatacttccatatggtcagatttttgtttatttggtgttatcaattgttgtgtggtatttctatgttatgtactggtgtatattgttatctttgtattgaaaattgtgaacttcttagtttattgcctaggaaaagtaatagttatctttcttaatgcactaggtacatcgtgtattgttagacattgtcaatgcttcagcaaatgccacaccaggacttggaagatatcctccattcaagcgcgaggtatcacctagctattttagagtttctttcctttcgagtttcacgttggtagagtttattgttgactgatgtgagtaaaaaatctatgtttcctttcgcaaggtcattgcaatagcatcaaatgcactagacagcttcaaaaatgatgcaaaaaagatggttgttgcacttgttgatatggagcgcgcctttgttcctcctcagcatttcatccgtctagtgcaaagaaggttgatttttggctagttttcccccttcaattttagttatcatttgtctccaatagttagttaacatttctccctgttcaatttctatacttactttttgataaaatatttgtgttcattcgatttataaattcatttcctgtaatattttgatgttatgaatttagcatggaaatcttagtatgtttcctacgtacgccttcaaagaagtatctttaagtgatccatgaacactgaaggacacatgcaacttcaggttaacttcagctattcttttctagggtctgctttggtagggatgatttatctccaaattcttatcctctttttagagttagatctttaggatattgctcaaattgagctataccaacaattgtcaaagcaatccccagcatccaaacacccccttatcttgaatcagtcgaacatatgattaccagggatatacaatctctttgttgaaattcagcaagttgccctttgcttgataatcaatctttccattatttatattttgtaaagataagataattttatggctacacagttacactatggaatgttgagccttgtcaattttttttaacaatactggcagaatggaaaggcaacgccgtgaggatgaattaaaaaatcgatcctccaagaaaccacaggatgctgaccaacccatgggaaaaagggtaaggcagcctaaatggattttgattcacactgacttgttttgttaggaatacacttatttagattattagacatggtatttcttcttttcaccattacaaggctgaaataactatgctttggttctaggcctccagtccccagacaggatctgagaaagacacaaaagacaaatcagcgaaagacaaagacaaagacaaatcaggccagcaagacaaagacgcaaaagaggggtcctctgtgcaggttgctggttcttctggtgaaattactgcaggtaagaatgtgtcaaatcatgctgtgctcaagctagccattatggaaaaccacaaattttttattgaatttaggctcaagacaggcttaaagcacttctattctagtctaaaaactcattctgtaagaatccaggagttggagctctggtaaacaggccctttgaaccatttggtgaaatgaaacatttgttttgtctcattgtaaaaaagtacatgcaaatataaatattcgttaattttgtacatttttcttcaggttaccttttgaagaaaagtgcaaaaacaaatggatggagtaggaggtggtttgtcctcaatgagaaaagcggaaaggttaatcagagttcaatcatcatcttttagttttgtttgtctttttgcactaacaggaggaatatcaggataatttatttatgtattttccgatggacttctatgcatgggtggttggttaaccttctatttttatcagcttggctacacgaagaaacaagaggagagacattttcgtggtgtcatcactcttgaggtgtgtgcgcaaaccttgtccttaaatttgcatgtaatttattctaccattattgggtttgtttttttgccttatcccttggaaagagctatctgatattggaagaaacatcacatatacatcaacaaatgctgtaaaatgaacttagttggtaacttgaatttgacatcattgtgcaggagtgtaaccttgaagaagtagaggaggaagaacctcctaaaagtttgaaggattcaaaaaaggcaaatgggccagagaaaggcccaagtctcgtctttaagataactaacagggttgcctacaaaacagttctaaaaggttaagatccctgaatacctcagcttgatttttttctttataagacccttgttgtctaaatggtgtatttccttttacagctcatagtgctgttgtattgaaagctgagagcacggccgacaaagttgagtgggtaaataagatacgggctgtaattcaaagcaaagggggatcattcaagggtccaaatactgatggtggttccatgagacaaagcaattccgatggtgctctggtagtttctagctatatccattcctacgcttttagccctctggctctaattttctccttgtcaaactctttcttattttgatgttaagactgtaaaactttatttcatgttccttaagataaacatgttgtattgttgttgttggcatgagttacttacttccatttgacctttcaattgacatctgatccctgcacttttcaaaggatactatggcacggagacctgctgatcctgaagaagaacttagatggatgtcccatgaagttcgtggttatgttgaggctgttttgaatagtctggcagcaaatgtcccaaaggtttacattaaaaaaaagctagcattgctcatttcattggaccctgtcattgtggcaatgttcttattgttttttccccttctcttatcaggctattgtgttgtgccaagtggagaaggcaaaggaagatatgctaaaccagctatatagttcaataaggttgatgaatacttctcttatcttctggaggctataatactgtttctagctttttgcattttttccccacctgacagtttcagattctttgtgctgcaatagtgtcatcatgagccatctggatcaaaagggtgccatgggaatcctgtagatctattttctatgcatatgattttgatcttgctatttagtaatccctatagtgtgtataaacctcagaatcattctggcatattatcttttttctggttacatgaaaaagaaatattggcaccagaagaatgttgtcataccactttgttgtattctttgggagggattttagttattttagttctaactgattgtcaaaaatacagtttcgtgggacaggtgttgggatccacatgttattccagcacttcgttgttcattgatgctatttgcagtttgtttattcttagcttatattatagacttgcttaaatggtacacctaagctatttatactatatgctgtttttaatgccattattatctaatcttaattcctttgctttttttgtcattaccagtgggcaaagcaatgcaaaaattgaagagcttctgcaagaggaccataatgctaaacgtagaagggaaaaataccaaaaacaatcatctctcttgtcaaagcttacccgtcaacttagtgtccatgacaacagggctgcttcttatgccaatgatatctctgaagctggtaagcttactatactttcaatgcctgagaagtaatagcaaatacaattgtatggtattttacatctcctttgtaactagttgttaatgttgttcattacctgtcattgatatagttacccagctgaccattcaccccttttataactcatatttctacatgttgaatcatagggtgactaatgtagattgcatgttacttttcttctgttaatttgtcacaaatttcttaaacggaatcatttgcagagagcccccggacacccaaccgcccaggtgaggattggaggtctgccttcgattccgcatccaacggacccagctcaggcagcgaatcaaggtcaagaagcgctgatggacgcagagggcgctatgaaaacggcgacgtgacctccggtgccaactccggcagccgacgcactccaaaccggttacctccagcacctcctaaatactaatcacgctgattagtatatatccatgaacgagcgccgtgatgtattcttgctaggcaccacgccctgtttctgattgatattggtggctggggtgagcggatttgggggatttggactatagagagagaagcgtcttgttagtggagagattgcatgaacaatttgtaagcagggtaccctgagttgtttatagaaatataaataggtaatccatccattatctctattgtttcgtcatctttttttgactcattcatgtctgattaatccccctgcttataggattttgtgggacgatcagtctagctttgtactatatcatactgtatacttatatatcattgtacgcgtacacttc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0247800, RefSeq:Os06g0247800