Difference between revisions of "Os06g0272800"

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(Created page with "{{JaponicaGene| GeneName = Os06g0272800| Description = Protein of unknown function DUF231, plant domain containing protein| Version = NM_001063900.1 GI:115467531 GeneID:434...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os06g0272800|
 
GeneName = Os06g0272800|

Revision as of 20:21, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os06g0272800

Description

Protein of unknown function DUF231, plant domain containing protein

Version

NM_001063900.1 GI:115467531 GeneID:4340732

Length

3440 bp

Definition

Oryza sativa Japonica Group Os06g0272800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:9201969..9205408

Sequence Coding Region

9201969..9203235,9203995..9204176,9204259..9204795,9204926..9205408

Expression

GEO Profiles:Os06g0272800

Genome Context

<gbrowseImage1> name=NC_008399:9201969..9205408 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:9201969..9205408 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgacgcctcttaataatctctgcaattttcgtgtcaagaagcagtactacaaccccaggtgcttgatccccgccgtctctctcctcctattcgtcgtcatcctcaccgtctctaatacatacttccccttcccgacaactaagtcgcgaacactgtcttactcttccttctcctcctcccccggtgggcagaaggccgccgacgaggcctgcaacatatttaggggagagtgggttccggatcctgatgcaccttactacaccaacaacacctgctcggtcatccacgagcactatgactgtatgaagtacggaaagccggaccttggcttcgtgcagtggcggtggcgtcccgacagttgtgatctcccccgtctcgacccggcgcgcttcctctcctccatgagggggaagaccttggccttcattggggattcccttgccaggaaccacatgaactccctcatctgtctactgaccagggtcgccgagccgacgacgagctggccgagcagcgagcacacggtgtaccactacggcggcggctacaacttcaccgtcctcagcttctgggcgccgttcctggtccagaacgagctcgtcgacgccgacgggccggcgcacacgggcctgtggaacctctacctcgacgagcccgacgcagtgtgggcgccgcacgtcccggcgttcgactacgccgtcgtgtcggcgtcgagctggttctaccggccgtcgatgctgtacgaggccggccggctcgtgggctgccaccactgcctcctccccaacgtcaccgacctcacgctgcggtacgcgctccgcatggccacccgcgccgcgctccgcgccgtggtgggcggcggcggcggcggcggcgtgaccgccgtgcttcggaccgtgtcgccgtcgcagtacgagggcggggagtggaacaaggacgggaactgcgtccggacgcggccgtaccggcgcggcgagaagacgctgcagggcgtcgagctcgacttccacacgctgcaggtggaggagttcgaggcggcgaagagggcggcgagcggcggtggggcgaggatgatgctgatggacacgacggaggcgatgatactgcgggcggacgcgcacccgagcaggtacaggggatggacgcgtcgcaagggatggatgaaggagtacttcaccatctccaacgactgcgtgcactggtcgatgatgaagtttcacgaggtgatcaagctgccatccattgctcattacggcctacgctatgtgcttcccgccgccgccgtcgccgcgtgcgttctggtgctcgccaccgtcagcctacccggccgcgtgccgctgccgctgctgctggcgccggaggtgatgacgaagacggcggatggcgtcggcggcgacacgtctggctgtgacatcttcaagggcgagtgggtgccggacatggccggcgagccgccgccgtacaccagcgagagctgtccggtgatccatggacactatgattgcatgcggtacggacggccggatcttgggtacgtccggtggcggtggcggccggacggcgggtgcgagctgctgcggttcgacgcggcgaggtttctcgccgcgatgaggggcaggtcggtggcgttcgtcggggactcgctggcgaggaaccagatgcactcgctggtgtgcctcctgtcgcacgccgagcggccggcgccgtggacgaacggcagctacgcgtaccgcttcgagcggcacggcctcaccgtcacggcgttctggtcgccgttcctcgtccgcgccgtcgagacggaccccgacggcccgacggggagcggctccggcctgtggagcctccacctcgacgagcccgacgccgggtgggcggcgcacgtcggcgcgttcgactacgtcgtcgtctccgccgggagctggttctaccggccgtcgatgttctacgaccgccgcggccgcctcgtcgggtgcaacacctgcctgtccccgaacgtcaccgacctcaccctccgttactccctccggatggcgttccggagcgcgctccgggcggcggcgacgggctcgcaccgccacgccacgaggaggacggtgatcgtgcggacgatctcgccgtcgcactacgagaacgggacgtggaacggggacggggactgcctccggactcggccggcgcggcgcggcgagtgggagttgaacgccatggagaaggacatgcaccggatacaggtcgaggagttcgcggcggcggcggaggagacggcggggaagagggggaaagaggcggcgaggatgctgctgatggacgcgacggaggccatggcgcagcggccggacggccacccgagcaagtacaggctgtggcagccggacaagttcaaggtgtcgcgggactgcgtgcactggtgccttcccggcgccatggacgcctgcaacgacatgctgttccacatgctcatcgggtga</cdnaseq>

Protein Sequence

<aaseq>MTPLNNLCNFRVKKQYYNPRCLIPAVSLLLFVVILTVSNTYFPF PTTKSRTLSYSSFSSSPGGQKAADEACNIFRGEWVPDPDAPYYTNNTCSVIHEHYDCM KYGKPDLGFVQWRWRPDSCDLPRLDPARFLSSMRGKTLAFIGDSLARNHMNSLICLLT RVAEPTTSWPSSEHTVYHYGGGYNFTVLSFWAPFLVQNELVDADGPAHTGLWNLYLDE PDAVWAPHVPAFDYAVVSASSWFYRPSMLYEAGRLVGCHHCLLPNVTDLTLRYALRMA TRAALRAVVGGGGGGGVTAVLRTVSPSQYEGGEWNKDGNCVRTRPYRRGEKTLQGVEL DFHTLQVEEFEAAKRAASGGGARMMLMDTTEAMILRADAHPSRYRGWTRRKGWMKEYF TISNDCVHWSMMKFHEVIKLPSIAHYGLRYVLPAAAVAACVLVLATVSLPGRVPLPLL LAPEVMTKTADGVGGDTSGCDIFKGEWVPDMAGEPPPYTSESCPVIHGHYDCMRYGRP DLGYVRWRWRPDGGCELLRFDAARFLAAMRGRSVAFVGDSLARNQMHSLVCLLSHAER PAPWTNGSYAYRFERHGLTVTAFWSPFLVRAVETDPDGPTGSGSGLWSLHLDEPDAGW AAHVGAFDYVVVSAGSWFYRPSMFYDRRGRLVGCNTCLSPNVTDLTLRYSLRMAFRSA LRAAATGSHRHATRRTVIVRTISPSHYENGTWNGDGDCLRTRPARRGEWELNAMEKDM HRIQVEEFAAAAEETAGKRGKEAARMLLMDATEAMAQRPDGHPSKYRLWQPDKFKVSR DCVHWCLPGAMDACNDMLFHMLIG</aaseq>

Gene Sequence

<dnaseqindica>2174..3440#1233..1414#614..1150#1..483#atgacgcctcttaataatctctgcaattttcgtgtcaagaagcagtactacaaccccaggtgcttgatccccgccgtctctctcctcctattcgtcgtcatcctcaccgtctctaatacatacttccccttcccgacaactaagtcgcgaacactgtcttactcttccttctcctcctcccccggtgggcagaaggccgccgacgaggcctgcaacatatttaggggagagtgggttccggatcctgatgcaccttactacaccaacaacacctgctcggtcatccacgagcactatgactgtatgaagtacggaaagccggaccttggcttcgtgcagtggcggtggcgtcccgacagttgtgatctcccccgtctcgacccggcgcgcttcctctcctccatgagggggaagaccttggccttcattggggattcccttgccaggaaccacatgaactccctcatctgtctactgaccagggtaaaaaagtgaaaaacgtgccggatttgctacagtactagcttcgatctgacccgtcgatcgcttgatcggacggtcagaaatgggccagcagcaacaagggtgtgacgttttgttggccggcctgcaggtcgccgagccgacgacgagctggccgagcagcgagcacacggtgtaccactacggcggcggctacaacttcaccgtcctcagcttctgggcgccgttcctggtccagaacgagctcgtcgacgccgacgggccggcgcacacgggcctgtggaacctctacctcgacgagcccgacgcagtgtgggcgccgcacgtcccggcgttcgactacgccgtcgtgtcggcgtcgagctggttctaccggccgtcgatgctgtacgaggccggccggctcgtgggctgccaccactgcctcctccccaacgtcaccgacctcacgctgcggtacgcgctccgcatggccacccgcgccgcgctccgcgccgtggtgggcggcggcggcggcggcggcgtgaccgccgtgcttcggaccgtgtcgccgtcgcagtacgagggcggggagtggaacaaggacgggaactgcgtccggacgcggccgtaccggcgcggcgagaagacgctgcagggcgtcgagctcgacttccacacgctgcaggttaatttcttgatttttctccattgatctagtgatcaattatcttgttctttctagggaacgtgtgttctgagcttcgtaggtggaggagttcgaggcggcgaagagggcggcgagcggcggtggggcgaggatgatgctgatggacacgacggaggcgatgatactgcgggcggacgcgcacccgagcaggtacaggggatggacgcgtcgcaagggatggatgaaggagtacttcaccatctccaacgactgcgtgcactggtgcgtccccggcgccgtcgacgcctggaacgacatgctctcacacatgttgctcacatcgcaaagctagttagttaggttattgatcaaacgaacgtagcagccgaaaaaaacagagaaaaatacattcactcctgaattcagtctagaatttcaaaaccaccgtccatgatccatgtgaatttctagcaaattgcacgagctgaactcaaacattttggtcctgtttgctgcattcgcaaagggttattgtgattccgtctgtatggacctaaatcgacctgaggcccaatattgcgaaaaatttcagaacaaacatcgtaatcgatttgagatactatattgatattttgtgacaaatctggaagaattaggaataatctagccgattcaaaagcagtggttgaactcaagttggctgatctcgacatgcagtcaaaagattatcagacagaaagggaaagctgctgctaggctagctcatacaggtggccagtgcccctggtctcaaaccaccacacctgtttagcacttcgattctttccatttcgccaagacctagtaataaacaggtggttatctcaaactacacgcgtggaatccaccatcccaagtgtacgctgaatgctaatttatcacgtaatctaatgaatattcgtgacaaaaactgcagaaaaaattcgatgtatatacagcaatctcatctcatttcatatccatgagctaagctaagctgtagtgtggacgttgaccaaccaggtcgatgatgaagtttcacgaggtgatcaagctgccatccattgctcattacggcctacgctatgtgcttcccgccgccgccgtcgccgcgtgcgttctggtgctcgccaccgtcagcctacccggccgcgtgccgctgccgctgctgctggcgccggaggtgatgacgaagacggcggatggcgtcggcggcgacacgtctggctgtgacatcttcaagggcgagtgggtgccggacatggccggcgagccgccgccgtacaccagcgagagctgtccggtgatccatggacactatgattgcatgcggtacggacggccggatcttgggtacgtccggtggcggtggcggccggacggcgggtgcgagctgctgcggttcgacgcggcgaggtttctcgccgcgatgaggggcaggtcggtggcgttcgtcggggactcgctggcgaggaaccagatgcactcgctggtgtgcctcctgtcgcacgccgagcggccggcgccgtggacgaacggcagctacgcgtaccgcttcgagcggcacggcctcaccgtcacggcgttctggtcgccgttcctcgtccgcgccgtcgagacggaccccgacggcccgacggggagcggctccggcctgtggagcctccacctcgacgagcccgacgccgggtgggcggcgcacgtcggcgcgttcgactacgtcgtcgtctccgccgggagctggttctaccggccgtcgatgttctacgaccgccgcggccgcctcgtcgggtgcaacacctgcctgtccccgaacgtcaccgacctcaccctccgttactccctccggatggcgttccggagcgcgctccgggcggcggcgacgggctcgcaccgccacgccacgaggaggacggtgatcgtgcggacgatctcgccgtcgcactacgagaacgggacgtggaacggggacggggactgcctccggactcggccggcgcggcgcggcgagtgggagttgaacgccatggagaaggacatgcaccggatacaggtcgaggagttcgcggcggcggcggaggagacggcggggaagagggggaaagaggcggcgaggatgctgctgatggacgcgacggaggccatggcgcagcggccggacggccacccgagcaagtacaggctgtggcagccggacaagttcaaggtgtcgcgggactgcgtgcactggtgccttcccggcgccatggacgcctgcaacgacatgctgttccacatgctcatcgggtga</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0272800, RefSeq:Os06g0272800