Difference between revisions of "Os06g0498500"

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(Created page with "{{JaponicaGene| GeneName = Os06g0498500| Description = Nucleolar complex-associated family protein| Version = NM_001064235.1 GI:115468201 GeneID:4341106| Length = 6776 bp|...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os06g0498500|
 
GeneName = Os06g0498500|

Revision as of 20:23, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os06g0498500

Description

Nucleolar complex-associated family protein

Version

NM_001064235.1 GI:115468201 GeneID:4341106

Length

6776 bp

Definition

Oryza sativa Japonica Group Os06g0498500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:18382189..18388964

Sequence Coding Region

18382280..18382637,18383688..18383881,18384496..18384704,18384787..18384889,18385275..18385438
,18385701..18385839,18386055..18386225,18386309..18386445,18386592..18386906
,18387519..18387658,18387838..18387935,18388022..18388534

Expression

GEO Profiles:Os06g0498500

Genome Context

<gbrowseImage1> name=NC_008399:18382189..18388964 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:18382189..18388964 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggaagagcagcagcaagaagaagaaggacaaggtgatcctgcccccgcagctgccgccggaggtggacgacgacgacgtggtggtctctgacgaggacgtcgagttcttcaggggcaacgagggccacgcccgcgcgctcgccacgctcgacaggaagtccatcgacagctacgtcaccagggtcgcccaccacgacgaggacgaggtcgagcgcctctacgaggagcgcgagcgcaggaggaaggcggtcgaggccctcaggcccaagaaccacgacgacgacgacttcgaggtcgaccgcgtcgacgccctccccgtcaagaccctgcaaggggagctggtctacaacaacgccaagaaagcgagatttgatgacagttctaataatgttgaatctaaatctgaagacaaagtaggaaattccaaacaaactattcaaaagggagaacggaaggaaaaatccaaaagcaaaaagggagatggtaaattgcaaaatgtgcaagctcaaactgaagcttcaaatggaaaattacaatcaaaagtgctggaggaggtgaaggaggaactttcagctgaggaattatttgagaaaaagaaggcccagctggctgaaatagggatgtctatgcttgaagatcctgaatcacatattagatctctaaatgatatgttaaacatatgcaatgacaaagaccagaaggttgttaaacttagtctgatgtccttgcttgctgtgttcagggacattattcctagttaccgcattaggcagttgacagaaaaagagcttacggtagaggtttcaaaagatgtaaaaaagatgagatattatgaatacacacttcttcgctcctacaaggcatacctgcaaaagttaatctccttggagaagcaaccaaatttttccgctctggctgttcgttgcatgtgtactttactagatactgctccacatttcaacttccgtgaaagtatacttgccagcgtggcaagaaatttaagttctccagatgatgcagtgaggaaaatgtgttgtgaaacgataaggtctctatttgtagatgaaggaaagcatcgtggtgaggcaactgttgaagctgtgagattgattgctgatcatgtgaagctaaacgattgccagcttcatcctgatagcattgaggtcttcctatctttgagatttgatgatgatcttggaaaagatgacacagaggaagaaaagggaaaaccaaagaagaacaaacgacgacaaaaccaggaagtcccaaagcaattgccagtgagtgataataagaaagccaaacaggaattgatctcaaaggctagagaagaggttgatgctgaacttagatctgtttcctttactcttgatccaaaggaaaggagaaggatacagaaagaagcactctctgctctttttgagacttactttcggattttgaagcatagcatgagtatttcaaattccaggggcaaggtcattaatgtctccccagatggctcacacccactacttgctccatgtttggagggtttaggaaaattctcacacttaattgatttggatttcatgggtgaacttgtcgcgtgcctcaagaagctttctgggtataccgaccatcactctggcacagtacatgacaatacactgtctgtatcagaacgtctgcagtgctgcatagttgcatttaaagtctggaggagcaaccttgaagctctgaatgtagacctgcaagacttctttgtgcagctttttaacctcattctggagtatcggcctgacagagatcgtggtgaggtattagctgatgctctgaagacacttctctgggaaggcaaacagcaggatatgataagagcagctgctttcattaaacgcctagcaacctttgctttgtcctttggttctgcagaagccatggcagcattaatcacactgaagcatcttcttcaaaagaatagcaagtgcagaaacatgttggaaaatgattctggtggtggctccctgtcttgcttagttgcgaaatatgacccagaagctaaagatccttatctgagtggggcacttgcctcagtcctatgggagcttagccttctgcagaagcattacgattcctctgtttcctcaatggcctcaaatatcttgagcatggccaatttgaatcctacacagaatcctgttccaatttcaaatgcaagccctctagaagcatatagagacttgtcaatggaacggaaattgtctaaaccagcgaataaattgttgccactaaactgcagaaagaagaggcgtggtaaggagtttgttgccctaagccctgcagcgctcgagggatcagattgcgttgcgggtggagatgaactcaaagagaagttaaaaaatcattttgcggtactaagaggtatctcagagaatgagagattgagagctgagctgaaccacacgttgtcatccatcaacttgtacaaggaatacaagaagcagaagaaaagcaggaaatcaaaggctgttaagaaaaaggtttcaagggcttaa</cdnaseq>

Protein Sequence

<aaseq>MGKSSSKKKKDKVILPPQLPPEVDDDDVVVSDEDVEFFRGNEGH ARALATLDRKSIDSYVTRVAHHDEDEVERLYEERERRRKAVEALRPKNHDDDDFEVDR VDALPVKTLQGELVYNNAKKARFDDSSNNVESKSEDKVGNSKQTIQKGERKEKSKSKK GDGKLQNVQAQTEASNGKLQSKVLEEVKEELSAEELFEKKKAQLAEIGMSMLEDPESH IRSLNDMLNICNDKDQKVVKLSLMSLLAVFRDIIPSYRIRQLTEKELTVEVSKDVKKM RYYEYTLLRSYKAYLQKLISLEKQPNFSALAVRCMCTLLDTAPHFNFRESILASVARN LSSPDDAVRKMCCETIRSLFVDEGKHRGEATVEAVRLIADHVKLNDCQLHPDSIEVFL SLRFDDDLGKDDTEEEKGKPKKNKRRQNQEVPKQLPVSDNKKAKQELISKAREEVDAE LRSVSFTLDPKERRRIQKEALSALFETYFRILKHSMSISNSRGKVINVSPDGSHPLLA PCLEGLGKFSHLIDLDFMGELVACLKKLSGYTDHHSGTVHDNTLSVSERLQCCIVAFK VWRSNLEALNVDLQDFFVQLFNLILEYRPDRDRGEVLADALKTLLWEGKQQDMIRAAA FIKRLATFALSFGSAEAMAALITLKHLLQKNSKCRNMLENDSGGGSLSCLVAKYDPEA KDPYLSGALASVLWELSLLQKHYDSSVSSMASNILSMANLNPTQNPVPISNASPLEAY RDLSMERKLSKPANKLLPLNCRKKRRGKEFVALSPAALEGSDCVAGGDELKEKLKNHF AVLRGISENERLRAELNHTLSSINLYKEYKKQKKSRKSKAVKKKVSRA</aaseq>

Gene Sequence

<dnaseqindica>92..449#1500..1693#2308..2516#2599..2701#3087..3250#3513..3651#3867..4037#4121..4257#4404..4718#5331..5470#5650..5747#5834..6346#gccgccgcggacgaaaccctagctaaaaccctcctctccctctccctctccctctcaccgagccgcgcggcctcgccaaggaccggcagcgatggggaagagcagcagcaagaagaagaaggacaaggtgatcctgcccccgcagctgccgccggaggtggacgacgacgacgtggtggtctctgacgaggacgtcgagttcttcaggggcaacgagggccacgcccgcgcgctcgccacgctcgacaggaagtccatcgacagctacgtcaccagggtcgcccaccacgacgaggacgaggtcgagcgcctctacgaggagcgcgagcgcaggaggaaggcggtcgaggccctcaggcccaagaaccacgacgacgacgacttcgaggtcgaccgcgtcgacgccctccccgtcaagaccctgcaaggggagctggtctacaacaacggtactatacttttattttaatcttatttgttgttctgctgccgcgacacactactaaatcgattcaattctcactataattcaagtccttattcgaatgcaagaattcaattctcactctaattcatagtccttatgcaatgtaagaattgcacatctcttcctatagatacatactccctccatcccaaaataaacaatcgatgtaacacatcctagtactacgaatttggacagggcatcctgtactaggtttgtttattttgggacggattgagtaattgggtaggacatttcgatattattgaatagtaaaagggtgtggcaaactcgttacttccaaatccactactctcgttgtcacagttgcagtactgaggagaaaatgttgaactgcaaagcgaaatttgtctatgcattgccaatgcctaatcacaaatgtttgtatttggaatggtcccctgggaatgtaaatgattggaataaactatacaagtggaagaaagactgaccgatctagctataaaaactagttgacatgtccaagggtactgaacaaattcactcggtacattgagcctaggtctttcggccttttcattcgcaaatcatgcagtcctgtgtaccaggttgaatgaattggacattggatttcagctggcaagtacatagaatccaccattctttttctatgaaagagctaaattttggcgcttatgctgttatgcatgtatggtcatgtatccattgttttaaaggactaacgcatactagtttgtatggaactggctataatgatctttgcttccttaaataaattagatgttcagtgtaactgaaagatcacggcaagaccttctccaaatagtgagagaaaaggcacaaatattgttctgtggatattaattttgattaagcacagaagaagctatatgcatcagtttctatgtgttactgaatgatgccttttgaagcttaaagatgcctttgtcatatgcctatgctacttggtgctattctacttagttaacatatttgtattgccgtgcagccaagaaagcgagatttgatgacagttctaataatgttgaatctaaatctgaagacaaagtaggaaattccaaacaaactattcaaaagggagaacggaaggaaaaatccaaaagcaaaaagggagatggtaaattgcaaaatgtgcaagctcaaactgaagcttcaaatggaaaattacaatcaaaagtgctggtattaccttgttctttttttgcatcacagagattcatttttcaacaagccttttgcttatgatacataattttaatgcctgttaggaagacaagctgtctcgacctccttgctttggttgttggaaaaaccatatgctatgtactatatatatgccttcttcataacggtagcacaaaaaatatatgatttggccttgcttgattgcaactttgtcagtatggaagtatcctatgcatcattgttgatcaacatacatccacatatataatttgactgtcatacctgtattagtttagtgctctctggcttattcgttgttgacatgaaacgctaagatttttcgagaaaacgctaggtcagatggtacggaactgtgaacatcacagtatgtatatgagttctgggtattaaactattaatcatacagcctatagaatgcagtgcaagaataaccatggagaaaaaagcatgtttgtaaaatgttgggtcaatattaaaacaaatgatgggcccacaatttcaacccttcaagatcttaaaatcaccatgttgctatttgttagttaatgctttttttttcacatatgtcttgtacttgctccgattgacaggaggaggtgaaggaggaactttcagctgaggaattatttgagaaaaagaaggcccagctggctgaaatagggatgtctatgcttgaagatcctgaatcacatattagatctctaaatgatatgttaaacatatgcaatgacaaagaccagaaggttgttaaacttagtctgatgtccttgcttgctgtgttcagggacattattcctaggtatgtgatggttgattttcattttgtattttgattacatattaaggtgtctttctcatgcctcattctctgtttgctgcagttaccgcattaggcagttgacagaaaaagagcttacggtagaggtttcaaaagatgtaaaaaagatgagatattatgaatacacacttcttcgctcctacaaggtttcattccacctccttgctttttaattagtgacagacattatcctttattctgtaattctctcatatgaattatgtttgaatggttccatcatttattttgttgtttgaaattgatttgcatggggatgaatatggtacaaaaacattgagctacaaaaattctcaacctttgcctgttccccatattttttgtttgcctcccaactccccatgtaagaggattattgtcttgttgaaaaggtacacataatgtgtataacgtgcatatatcatgccatgcactatagccgaatgcagttacattttccttgcattcggaagttagtttcagaagttatatttcttgggtttgattttcctttgctcttctatgctttttcaggcatacctgcaaaagttaatctccttggagaagcaaccaaatttttccgctctggctgttcgttgcatgtgtactttactagatactgctccacatttcaacttccgtgaaagtatacttgccagcgtggcaagaaatttaagttctccagatgatgcagtgaggttgactacgtaacctgtattaatttatatcaaaatcattgtttcctgttagatgttgatttagctgtgcaactgatttccttgaataatgtcttgtgtagtttgatttgtggatcatctgttttttatttatttaatttttgatcatctgatggtctaaattgtctacttaaaatgatgggaaacactgggttacctttttagccaactgttccatttaatgttgtcctcacattcttgcatttcccccaattctttgtaggaaaatgtgttgtgaaacgataaggtctctatttgtagatgaaggaaagcatcgtggtgaggcaactgttgaagctgtgagattgattgctgatcatgtgaagctaaacgattgccagcttcatcctgatagcattgaggtatgtgccaatatttgtatttattacatgtgatatgtggttattatttgtcttgtcgcatcttcaccatgcaattaatatgttaatggacttacttcaccagcttgggccctatgggcagcagctcattcctagctgctgaccactgccccatttcatccaacatagctgaaaatcaactccatgtgctaatcgtggccacttttttctgtaaggtcttcctatctttgagatttgatgatgatcttggaaaagatgacacagaggaagaaaagggaaaaccaaagaagaacaaacgacgacaaaaccaggaagtcccaaagcaattgccagtgagtgataataagaaagccaaacaggaattgatctcaaaggctagagaagaggtaacatttgttgcataatttgataggtatagctcaaactgtataagaaattcacttatttattattattactatttttgcaggttgatgctgaacttagatctgtttcctttactcttgatccaaaggaaaggagaaggatacagaaagaagcactctctgctctttttgagacttactttcggattttgaagcatagcatgagtatttcaaattccaggtatgtgcactttaatgttgtcacactagtttttgccataacaatttcattactggcattgtaccattcgagtttatccaatatgataaactttcacttactttggaataaagttactatgctgacagtcattatatcatcatcaggggcaaggtcattaatgtctccccagatggctcacacccactacttgctccatgtttggagggtttaggaaaattctcacacttaattgatttggatttcatgggtgaacttgtcgcgtgcctcaagaagctttctgggtataccgaccatcactctggcacagtacatgacaatacactgtctgtatcagaacgtctgcagtgctgcatagttgcatttaaagtctggaggagcaaccttgaagctctgaatgtagacctgcaagacttctttgtgcagctttttaacctcattctggagtatcggcctgacaggtttgaattctatttattttggtgctggtgatggggaagaaatatatatactcttgtcctttctaaaacacagattcatggataggtagcatcatagcaaatttttcttccgttattttttgcttacattacttattgttggtcagtgtttcaccattgaaatgcttattattactcataaataactactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttcaatgctagaatgacttacattgtgaaacggaggaagtagttatgtacagctataccacataaccatgctgattactgacaatgcattttatcatgtactccaatgccgattataatgtataatagaagaacattatacagtcttgcatatggtaagcaccattttattaatgtggaggcagcagtgaccaacatgtttaattcatggcttatggcggtccactttgtgtcttccatcaacaatacactttcagaatgttttcgtgttgtcattttttggtaaatcgaatggtggttatgtctaagatagctgttgcaaagttttcaagtaacttaagaacacaacctgatttctgtctctatccagagatcgtggtgaggtattagctgatgctctgaagacacttctctgggaaggcaaacagcaggatatgataagagcagctgctttcattaaacgcctagcaacctttgctttgtcctttggttctgcagaagccatggcaggtttgtgtttgttttgccttgcactttcccagtctttctaccttgattgtagtccaaatattagatccattggggtacgtttgtttttccttcctggacagtacataatatgtattaagtacaaacatctgtttcatttcctttgacataattgctgacatatttgaacaatatttcagcattaatcacactgaagcatcttcttcaaaagaatagcaagtgcagaaacatgttggaaaatgattctggtggtggctccctgtcttgcttagttgcggtatttgtctacccttgtgttgtgcaattcatcaacatcaattacagcttgtgtttacctaataatgctacctttcatttgtgcagaaatatgacccagaagctaaagatccttatctgagtggggcacttgcctcagtcctatgggagcttagccttctgcagaagcattacgattcctctgtttcctcaatggcctcaaatatcttgagcatggccaatttgaatcctacacagaatcctgttccaatttcaaatgcaagccctctagaagcatatagagacttgtcaatggaacggaaattgtctaaaccagcgaataaattgttgccactaaactgcagaaagaagaggcgtggtaaggagtttgttgccctaagccctgcagcgctcgagggatcagattgcgttgcgggtggagatgaactcaaagagaagttaaaaaatcattttgcggtactaagaggtatctcagagaatgagagattgagagctgagctgaaccacacgttgtcatccatcaacttgtacaaggaatacaagaagcagaagaaaagcaggaaatcaaaggctgttaagaaaaaggtttcaagggcttaagttgtgctgcgtttgggggaaatttttgcacaccagggaccaaaggtgtgcagaatgaacaattttgccatacccactttgtagcttatcgtagcttttgggtgtaacacatttgcagttccaagcatttctttttaagctcgttctatttcctgacatgtccttttattcttgttgcctggacctaaccaggctaacaagtttgctgccgctgtacaagatataacagtggcatgcttgtgttatctatatatattgttatgcatgaacaatgccatcccctatgcaaaactacagattggtagtcgcaaggtgtagggtgctcgcgcagaaagggggaaaaatagtaggttttactgtccactagcaaaatatccatgttttgctatgttaaagtacacatttatttgaatatatgtttttcatattt</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0498500, RefSeq:Os06g0498500